Protein–RNA interactions for Protein: P47180

PGU1, Polygalacturonase, yeastyeast

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
PGU1P47180 BFR2YDR299W 1605 nt0.72□□□□□ -2.29
PGU1P47180 APQ12YIL040W 417 nt0.72□□□□□ -2.29
PGU1P47180 snR52snR52 92 nt0.72□□□□□ -2.29
PGU1P47180 PMP1YCR024C-A 123 nt0.71□□□□□ -2.3
PGU1P47180 FYV10YIL097W 1551 nt0.7□□□□□ -2.3
PGU1P47180 YER053C-AYER053C-A 114 nt0.7□□□□□ -2.3
PGU1P47180 YIL002W-AYIL002W-A 210 nt0.7□□□□□ -2.3
PGU1P47180 YLR342W-AYLR342W-A 174 nt0.7□□□□□ -2.3
PGU1P47180 YLR399W-AYLR399W-A 105 nt0.7□□□□□ -2.3
PGU1P47180 PRP5YBR237W 2550 nt0.68□□□□□ -2.3
PGU1P47180 YEL073CYEL073C 324 nt0.66□□□□□ -2.3
PGU1P47180 YIL134C-AYIL134C-A 204 nt0.66□□□□□ -2.3
PGU1P47180 YPR160W-AYPR160W-A 81 nt0.66□□□□□ -2.3
PGU1P47180 PRP42YDR235W 1635 nt0.66□□□□□ -2.3
PGU1P47180 TRS65YGR166W 1683 nt0.65□□□□□ -2.3
PGU1P47180 tF(GAA)BtF(GAA)B 73 nt0.65□□□□□ -2.31
PGU1P47180 tF(GAA)FtF(GAA)F 73 nt0.65□□□□□ -2.31
PGU1P47180 tF(GAA)GtF(GAA)G 73 nt0.65□□□□□ -2.31
PGU1P47180 tF(GAA)H1tF(GAA)H1 73 nt0.65□□□□□ -2.31
PGU1P47180 tF(GAA)H2tF(GAA)H2 73 nt0.65□□□□□ -2.31
PGU1P47180 tF(GAA)MtF(GAA)M 73 nt0.65□□□□□ -2.31
PGU1P47180 tF(GAA)P1tF(GAA)P1 73 nt0.65□□□□□ -2.31
PGU1P47180 tF(GAA)P2tF(GAA)P2 73 nt0.65□□□□□ -2.31
PGU1P47180 tT(AGU)BtT(AGU)B 73 nt0.65□□□□□ -2.31
PGU1P47180 tT(AGU)CtT(AGU)C 73 nt0.65□□□□□ -2.31
PGU1P47180 tT(AGU)DtT(AGU)D 73 nt0.65□□□□□ -2.31
PGU1P47180 tT(AGU)HtT(AGU)H 73 nt0.65□□□□□ -2.31
PGU1P47180 tT(AGU)I1tT(AGU)I1 73 nt0.65□□□□□ -2.31
PGU1P47180 tT(AGU)I2tT(AGU)I2 73 nt0.65□□□□□ -2.31
PGU1P47180 tT(AGU)JtT(AGU)J 73 nt0.65□□□□□ -2.31
PGU1P47180 tT(AGU)N1tT(AGU)N1 73 nt0.65□□□□□ -2.31
PGU1P47180 tT(AGU)N2tT(AGU)N2 73 nt0.65□□□□□ -2.31
PGU1P47180 tT(AGU)O1tT(AGU)O1 73 nt0.65□□□□□ -2.31
PGU1P47180 tT(AGU)O2tT(AGU)O2 73 nt0.65□□□□□ -2.31
PGU1P47180 YMR160WYMR160W 2451 nt0.64□□□□□ -2.31
PGU1P47180 UTP20YBL004W 7482 nt0.64□□□□□ -2.31
PGU1P47180 SEC1YDR164C 2175 nt0.63□□□□□ -2.31
PGU1P47180 YJL182CYJL182C 318 nt0.63□□□□□ -2.31
PGU1P47180 YNL337WYNL337W 255 nt0.63□□□□□ -2.31
PGU1P47180 RKR1YMR247C 4689 nt0.62□□□□□ -2.31
PGU1P47180 YLR232WYLR232W 348 nt0.62□□□□□ -2.31
PGU1P47180 YNL097C-BYNL097C-B 123 nt0.62□□□□□ -2.31
PGU1P47180 CHS6YJL099W 2241 nt0.6□□□□□ -2.31
PGU1P47180 tN(GUU)QtN(GUU)Q 71 nt0.6□□□□□ -2.31
PGU1P47180 YHR131W-AYHR131W-A 246 nt0.6□□□□□ -2.31
PGU1P47180 ASE1YOR058C 2658 nt0.59□□□□□ -2.31
PGU1P47180 TAH1YCR060W 336 nt0.59□□□□□ -2.31
PGU1P47180 SNU13YEL026W 381 nt0.59□□□□□ -2.31
PGU1P47180 YJL127W-AYJL127W-A 117 nt0.59□□□□□ -2.31
PGU1P47180 YSP1YHR155W 3687 nt0.58□□□□□ -2.32
PGU1P47180 QCR9YGR183C 201 nt0.58□□□□□ -2.32
PGU1P47180 PAU12YGR294W 363 nt0.58□□□□□ -2.32
PGU1P47180 snR46snR46 197 nt0.58□□□□□ -2.32
PGU1P47180 HAL9YOL089C 3093 nt0.58□□□□□ -2.32
PGU1P47180 YLR041WYLR041W 321 nt0.57□□□□□ -2.32
PGU1P47180 OST4YDL232W 111 nt0.56□□□□□ -2.32
PGU1P47180 YPR159C-AYPR159C-A 102 nt0.56□□□□□ -2.32
PGU1P47180 PET111YMR257C 2403 nt0.56□□□□□ -2.32
PGU1P47180 YDR544CYDR544C 429 nt0.55□□□□□ -2.32
PGU1P47180 YGL182CYGL182C 324 nt0.55□□□□□ -2.32
PGU1P47180 YGR151CYGR151C 336 nt0.55□□□□□ -2.32
PGU1P47180 YJL150WYJL150W 303 nt0.54□□□□□ -2.32
PGU1P47180 PRP39YML046W 1890 nt0.54□□□□□ -2.32
PGU1P47180 YLR466C-BYLR466C-B 117 nt0.53□□□□□ -2.32
PGU1P47180 YBL039C-AYBL039C-A 84 nt0.53□□□□□ -2.32
PGU1P47180 YBR072C-AYBR072C-A 162 nt0.53□□□□□ -2.32
PGU1P47180 NNF2YGR089W 2811 nt0.53□□□□□ -2.32
PGU1P47180 CSE1YGL238W 2883 nt0.52□□□□□ -2.33
PGU1P47180 YHL015W-AYHL015W-A 84 nt0.52□□□□□ -2.33
PGU1P47180 YLL006W-AYLL006W-A 177 nt0.52□□□□□ -2.33
PGU1P47180 YMR272W-AYMR272W-A 114 nt0.52□□□□□ -2.33
PGU1P47180 YOR381W-AYOR381W-A 168 nt0.52□□□□□ -2.33
PGU1P47180 LTE1YAL024C 4308 nt0.51□□□□□ -2.33
PGU1P47180 YKL145W-AYKL145W-A 93 nt0.51□□□□□ -2.33
PGU1P47180 YNL198CYNL198C 303 nt0.51□□□□□ -2.33
PGU1P47180 tM(CAU)Q2tM(CAU)Q2 78 nt0.5□□□□□ -2.33
PGU1P47180 ULP2YIL031W 3105 nt0.49□□□□□ -2.33
PGU1P47180 UTP10YJL109C 5310 nt0.49□□□□□ -2.33
PGU1P47180 YOR192C-BYOR192C-B 5313 nt0.49□□□□□ -2.33
PGU1P47180 YOL014WYOL014W 375 nt0.48□□□□□ -2.33
PGU1P47180 YOR170WYOR170W 306 nt0.47□□□□□ -2.33
PGU1P47180 GLG1YKR058W 1851 nt0.47□□□□□ -2.33
PGU1P47180 FMP27YLR454W 7887 nt0.47□□□□□ -2.33
PGU1P47180 MLP1YKR095W 5628 nt0.46□□□□□ -2.34
PGU1P47180 YNL338WYNL338W 159 nt0.46□□□□□ -2.34
PGU1P47180 MYO1YHR023W 5787 nt0.46□□□□□ -2.34
PGU1P47180 COG6YNL041C 2520 nt0.45□□□□□ -2.34
PGU1P47180 SDH6YDR379C-A 240 nt0.45□□□□□ -2.34
PGU1P47180 YOR102WYOR102W 351 nt0.45□□□□□ -2.34
PGU1P47180 Q0032Q0032 291 nt0.44□□□□□ -2.34
PGU1P47180 SBH1YER087C-B 249 nt0.43□□□□□ -2.34
PGU1P47180 YOR314W-AYOR314W-A 111 nt0.42□□□□□ -2.34
PGU1P47180 snR39BsnR39B 96 nt0.42□□□□□ -2.34
PGU1P47180 YDR210WYDR210W 228 nt0.41□□□□□ -2.34
PGU1P47180 YOR329W-AYOR329W-A 210 nt0.41□□□□□ -2.34
PGU1P47180 YDR371C-AYDR371C-A 105 nt0.4□□□□□ -2.35
PGU1P47180 RPS26AYGL189C 360 nt0.4□□□□□ -2.35
PGU1P47180 BIR1YJR089W 2865 nt0.39□□□□□ -2.35
PGU1P47180 snR48snR48 113 nt0.39□□□□□ -2.35
PGU1P47180 NIP1YMR309C 2439 nt0.39□□□□□ -2.35
Retrieved 100 of 7,029 protein–RNA pairs in 12.9 ms