Protein–RNA interactions for Protein: P47107

YJR039W, Uncharacterized protein YJR039W, yeastyeast

Predictions only

Length 1,121 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
YJR039WP47107 CDC25YLR310C 4770 nt1.35□□□□□ -2.19
YJR039WP47107 FYV10YIL097W 1551 nt1.34□□□□□ -2.19
YJR039WP47107 YGL182CYGL182C 324 nt1.34□□□□□ -2.19
YJR039WP47107 ASE1YOR058C 2658 nt1.33□□□□□ -2.2
YJR039WP47107 YOR314W-AYOR314W-A 111 nt1.32□□□□□ -2.2
YJR039WP47107 snR48snR48 113 nt1.32□□□□□ -2.2
YJR039WP47107 ROM2YLR371W 4071 nt1.32□□□□□ -2.2
YJR039WP47107 RAD9YDR217C 3930 nt1.31□□□□□ -2.2
YJR039WP47107 TAH1YCR060W 336 nt1.3□□□□□ -2.2
YJR039WP47107 YLR041WYLR041W 321 nt1.3□□□□□ -2.2
YJR039WP47107 YBL039C-AYBL039C-A 84 nt1.3□□□□□ -2.2
YJR039WP47107 YIL020C-AYIL020C-A 339 nt1.28□□□□□ -2.2
YJR039WP47107 YGR130CYGR130C 2451 nt1.28□□□□□ -2.2
YJR039WP47107 SEC8YPR055W 3198 nt1.28□□□□□ -2.21
YJR039WP47107 CHS6YJL099W 2241 nt1.27□□□□□ -2.21
YJR039WP47107 tH(GUG)E1tH(GUG)E1 72 nt1.26□□□□□ -2.21
YJR039WP47107 tH(GUG)E2tH(GUG)E2 72 nt1.26□□□□□ -2.21
YJR039WP47107 tH(GUG)G1tH(GUG)G1 72 nt1.26□□□□□ -2.21
YJR039WP47107 tH(GUG)G2tH(GUG)G2 72 nt1.26□□□□□ -2.21
YJR039WP47107 tH(GUG)HtH(GUG)H 72 nt1.26□□□□□ -2.21
YJR039WP47107 tH(GUG)KtH(GUG)K 72 nt1.26□□□□□ -2.21
YJR039WP47107 tH(GUG)MtH(GUG)M 72 nt1.26□□□□□ -2.21
YJR039WP47107 tL(UAA)QtL(UAA)Q 85 nt1.26□□□□□ -2.21
YJR039WP47107 PRP16YKR086W 3216 nt1.26□□□□□ -2.21
YJR039WP47107 BUD3YCL014W 4911 nt1.26□□□□□ -2.21
YJR039WP47107 YLR232WYLR232W 348 nt1.25□□□□□ -2.21
YJR039WP47107 KAP120YPL125W 3099 nt1.23□□□□□ -2.21
YJR039WP47107 YLR399W-AYLR399W-A 105 nt1.22□□□□□ -2.21
YJR039WP47107 YOR329W-AYOR329W-A 210 nt1.21□□□□□ -2.22
YJR039WP47107 YPR160W-AYPR160W-A 81 nt1.21□□□□□ -2.22
YJR039WP47107 IML1YJR138W 4755 nt1.21□□□□□ -2.22
YJR039WP47107 SPT7YBR081C 3999 nt1.2□□□□□ -2.22
YJR039WP47107 NST1YNL091W 3723 nt1.2□□□□□ -2.22
YJR039WP47107 YDR544CYDR544C 429 nt1.19□□□□□ -2.22
YJR039WP47107 YHR131W-AYHR131W-A 246 nt1.19□□□□□ -2.22
YJR039WP47107 tN(GUU)QtN(GUU)Q 71 nt1.18□□□□□ -2.22
YJR039WP47107 BEM3YPL115C 3387 nt1.17□□□□□ -2.22
YJR039WP47107 QCR9YGR183C 201 nt1.17□□□□□ -2.22
YJR039WP47107 VAM6YDL077C 3150 nt1.16□□□□□ -2.22
YJR039WP47107 tM(CAU)Q2tM(CAU)Q2 78 nt1.15□□□□□ -2.23
YJR039WP47107 YNL067W-BYNL067W-B 141 nt1.15□□□□□ -2.23
YJR039WP47107 YCL001W-BYCL001W-B 255 nt1.14□□□□□ -2.23
YJR039WP47107 YDL073WYDL073W 2955 nt1.13□□□□□ -2.23
YJR039WP47107 YPR117WYPR117W 7470 nt1.12□□□□□ -2.23
YJR039WP47107 UBP3YER151C 2739 nt1.12□□□□□ -2.23
YJR039WP47107 SIP4YJL089W 2490 nt1.12□□□□□ -2.23
YJR039WP47107 DOP1YDR141C 5097 nt1.11□□□□□ -2.23
YJR039WP47107 YJR029WYJR029W 5268 nt1.11□□□□□ -2.23
YJR039WP47107 YPR137C-BYPR137C-B 5268 nt1.11□□□□□ -2.23
YJR039WP47107 BEM2YER155C 6504 nt1.11□□□□□ -2.23
YJR039WP47107 snR39BsnR39B 96 nt1.11□□□□□ -2.23
YJR039WP47107 SCC2YDR180W 4482 nt1.09□□□□□ -2.23
YJR039WP47107 YSP1YHR155W 3687 nt1.09□□□□□ -2.24
YJR039WP47107 COG6YNL041C 2520 nt1.09□□□□□ -2.24
YJR039WP47107 tV(UAC)BtV(UAC)B 74 nt1.07□□□□□ -2.24
YJR039WP47107 tV(UAC)DtV(UAC)D 74 nt1.07□□□□□ -2.24
YJR039WP47107 PAU12YGR294W 363 nt1.06□□□□□ -2.24
YJR039WP47107 PAU24YBR301W 363 nt1.06□□□□□ -2.24
YJR039WP47107 RKR1YMR247C 4689 nt1.06□□□□□ -2.24
YJR039WP47107 OST4YDL232W 111 nt1.05□□□□□ -2.24
YJR039WP47107 YDR210WYDR210W 228 nt1.05□□□□□ -2.24
YJR039WP47107 YCR095W-AYCR095W-A 159 nt1.04□□□□□ -2.24
YJR039WP47107 SOM1YEL059C-A 225 nt1.04□□□□□ -2.24
YJR039WP47107 Q0143Q0143 153 nt1.03□□□□□ -2.24
YJR039WP47107 YJL127W-AYJL127W-A 117 nt1.03□□□□□ -2.24
YJR039WP47107 EMT1tM(CAU)D 73 nt1.02□□□□□ -2.25
YJR039WP47107 EMT5tM(CAU)J1 73 nt1.02□□□□□ -2.25
YJR039WP47107 EMT3tM(CAU)J2 73 nt1.02□□□□□ -2.25
YJR039WP47107 EMT4tM(CAU)M 73 nt1.02□□□□□ -2.25
YJR039WP47107 EMT2tM(CAU)O2 73 nt1.02□□□□□ -2.25
YJR039WP47107 YBR072C-AYBR072C-A 162 nt1.02□□□□□ -2.25
YJR039WP47107 SEC1YDR164C 2175 nt1□□□□□ -2.25
YJR039WP47107 YIL071W-AYIL071W-A 477 nt0.99□□□□□ -2.25
YJR039WP47107 YBR099CYBR099C 384 nt0.99□□□□□ -2.25
YJR039WP47107 GLG1YKR058W 1851 nt0.98□□□□□ -2.25
YJR039WP47107 YGR146C-AYGR146C-A 162 nt0.97□□□□□ -2.25
YJR039WP47107 UTP20YBL004W 7482 nt0.96□□□□□ -2.26
YJR039WP47107 ULP2YIL031W 3105 nt0.95□□□□□ -2.26
YJR039WP47107 YLL006W-AYLL006W-A 177 nt0.94□□□□□ -2.26
YJR039WP47107 NNF2YGR089W 2811 nt0.94□□□□□ -2.26
YJR039WP47107 YNL205CYNL205C 423 nt0.93□□□□□ -2.26
YJR039WP47107 RPM2YML091C 3609 nt0.93□□□□□ -2.26
YJR039WP47107 snR85snR85 171 nt0.92□□□□□ -2.26
YJR039WP47107 tF(GAA)BtF(GAA)B 73 nt0.9□□□□□ -2.27
YJR039WP47107 tF(GAA)FtF(GAA)F 73 nt0.9□□□□□ -2.27
YJR039WP47107 tF(GAA)GtF(GAA)G 73 nt0.9□□□□□ -2.27
YJR039WP47107 tF(GAA)H1tF(GAA)H1 73 nt0.9□□□□□ -2.27
YJR039WP47107 tF(GAA)H2tF(GAA)H2 73 nt0.9□□□□□ -2.27
YJR039WP47107 tF(GAA)MtF(GAA)M 73 nt0.9□□□□□ -2.27
YJR039WP47107 tF(GAA)P1tF(GAA)P1 73 nt0.9□□□□□ -2.27
YJR039WP47107 tF(GAA)P2tF(GAA)P2 73 nt0.9□□□□□ -2.27
YJR039WP47107 YOR192C-BYOR192C-B 5313 nt0.88□□□□□ -2.27
YJR039WP47107 CSE1YGL238W 2883 nt0.88□□□□□ -2.27
YJR039WP47107 BIR1YJR089W 2865 nt0.85□□□□□ -2.27
YJR039WP47107 PMP2YEL017C-A 132 nt0.85□□□□□ -2.27
YJR039WP47107 PET111YMR257C 2403 nt0.84□□□□□ -2.27
YJR039WP47107 YIL142C-AYIL142C-A 333 nt0.82□□□□□ -2.28
YJR039WP47107 NIP1YMR309C 2439 nt0.81□□□□□ -2.28
YJR039WP47107 YNL266WYNL266W 420 nt0.8□□□□□ -2.28
YJR039WP47107 LTE1YAL024C 4308 nt0.78□□□□□ -2.28
Retrieved 100 of 7,029 protein–RNA pairs in 28.6 ms