Protein–RNA interactions for Protein: P42947

YJL107C, Uncharacterized UPF0442 protein YJL107C, yeastyeast

Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
YJL107CP42947 COX5BYIL111W 456 nt1.23□□□□□ -2.21
YJL107CP42947 YKL100W-AYKL100W-A 90 nt1.22□□□□□ -2.21
YJL107CP42947 BFR2YDR299W 1605 nt1.22□□□□□ -2.21
YJL107CP42947 ROM2YLR371W 4071 nt1.21□□□□□ -2.22
YJL107CP42947 CDC39YCR093W 6327 nt1.21□□□□□ -2.22
YJL107CP42947 tV(UAC)BtV(UAC)B 74 nt1.21□□□□□ -2.22
YJL107CP42947 tV(UAC)DtV(UAC)D 74 nt1.21□□□□□ -2.22
YJL107CP42947 STB6YKL072W 2301 nt1.2□□□□□ -2.22
YJL107CP42947 SNU13YEL026W 381 nt1.2□□□□□ -2.22
YJL107CP42947 YML002WYML002W 2214 nt1.2□□□□□ -2.22
YJL107CP42947 BUD3YCL014W 4911 nt1.2□□□□□ -2.22
YJL107CP42947 BEM2YER155C 6504 nt1.2□□□□□ -2.22
YJL107CP42947 RPL26BYGR034W 384 nt1.19□□□□□ -2.22
YJL107CP42947 NST1YNL091W 3723 nt1.18□□□□□ -2.22
YJL107CP42947 YGL182CYGL182C 324 nt1.18□□□□□ -2.22
YJL107CP42947 snR190snR190 190 nt1.18□□□□□ -2.22
YJL107CP42947 SIP4YJL089W 2490 nt1.16□□□□□ -2.22
YJL107CP42947 tL(UAA)QtL(UAA)Q 85 nt1.16□□□□□ -2.22
YJL107CP42947 YOR314W-AYOR314W-A 111 nt1.16□□□□□ -2.22
YJL107CP42947 snR48snR48 113 nt1.16□□□□□ -2.22
YJL107CP42947 ASE1YOR058C 2658 nt1.16□□□□□ -2.22
YJL107CP42947 FYV10YIL097W 1551 nt1.16□□□□□ -2.22
YJL107CP42947 TAH1YCR060W 336 nt1.15□□□□□ -2.23
YJL107CP42947 YBL039C-AYBL039C-A 84 nt1.15□□□□□ -2.23
YJL107CP42947 SPT7YBR081C 3999 nt1.14□□□□□ -2.23
YJL107CP42947 RAD9YDR217C 3930 nt1.13□□□□□ -2.23
YJL107CP42947 CHS6YJL099W 2241 nt1.13□□□□□ -2.23
YJL107CP42947 DOP1YDR141C 5097 nt1.13□□□□□ -2.23
YJL107CP42947 YLR041WYLR041W 321 nt1.12□□□□□ -2.23
YJL107CP42947 YPR117WYPR117W 7470 nt1.12□□□□□ -2.23
YJL107CP42947 SCC2YDR180W 4482 nt1.1□□□□□ -2.23
YJL107CP42947 YOR329W-AYOR329W-A 210 nt1.09□□□□□ -2.23
YJL107CP42947 STF2YGR008C 255 nt1.08□□□□□ -2.24
YJL107CP42947 YLR232WYLR232W 348 nt1.08□□□□□ -2.24
YJL107CP42947 PRP16YKR086W 3216 nt1.07□□□□□ -2.24
YJL107CP42947 YDR544CYDR544C 429 nt1.07□□□□□ -2.24
YJL107CP42947 YCL001W-BYCL001W-B 255 nt1.07□□□□□ -2.24
YJL107CP42947 VAM6YDL077C 3150 nt1.06□□□□□ -2.24
YJL107CP42947 SEC8YPR055W 3198 nt1.06□□□□□ -2.24
YJL107CP42947 KAP120YPL125W 3099 nt1.05□□□□□ -2.24
YJL107CP42947 YJR029WYJR029W 5268 nt1.04□□□□□ -2.24
YJL107CP42947 YPR137C-BYPR137C-B 5268 nt1.04□□□□□ -2.24
YJL107CP42947 tN(GUU)QtN(GUU)Q 71 nt1.04□□□□□ -2.24
YJL107CP42947 Q0143Q0143 153 nt1.04□□□□□ -2.24
YJL107CP42947 QCR9YGR183C 201 nt1.04□□□□□ -2.24
YJL107CP42947 HUG1YML058W-A 207 nt1.04□□□□□ -2.24
YJL107CP42947 YPR160W-AYPR160W-A 81 nt1.03□□□□□ -2.24
YJL107CP42947 UBP3YER151C 2739 nt1.03□□□□□ -2.24
YJL107CP42947 YHR131W-AYHR131W-A 246 nt1.02□□□□□ -2.25
YJL107CP42947 YLR399W-AYLR399W-A 105 nt1.02□□□□□ -2.25
YJL107CP42947 snR39BsnR39B 96 nt1.02□□□□□ -2.25
YJL107CP42947 tM(CAU)Q2tM(CAU)Q2 78 nt1.01□□□□□ -2.25
YJL107CP42947 YNL067W-BYNL067W-B 141 nt1.01□□□□□ -2.25
YJL107CP42947 BEM3YPL115C 3387 nt1□□□□□ -2.25
YJL107CP42947 YDL073WYDL073W 2955 nt0.99□□□□□ -2.25
YJL107CP42947 EMT1tM(CAU)D 73 nt0.98□□□□□ -2.25
YJL107CP42947 EMT5tM(CAU)J1 73 nt0.98□□□□□ -2.25
YJL107CP42947 EMT3tM(CAU)J2 73 nt0.98□□□□□ -2.25
YJL107CP42947 EMT4tM(CAU)M 73 nt0.98□□□□□ -2.25
YJL107CP42947 EMT2tM(CAU)O2 73 nt0.98□□□□□ -2.25
YJL107CP42947 OST4YDL232W 111 nt0.97□□□□□ -2.25
YJL107CP42947 YIL071W-AYIL071W-A 477 nt0.97□□□□□ -2.25
YJL107CP42947 YNL205CYNL205C 423 nt0.96□□□□□ -2.26
YJL107CP42947 COG6YNL041C 2520 nt0.95□□□□□ -2.26
YJL107CP42947 RKR1YMR247C 4689 nt0.95□□□□□ -2.26
YJL107CP42947 YCR095W-AYCR095W-A 159 nt0.94□□□□□ -2.26
YJL107CP42947 snR85snR85 171 nt0.94□□□□□ -2.26
YJL107CP42947 YDR210WYDR210W 228 nt0.94□□□□□ -2.26
YJL107CP42947 SOM1YEL059C-A 225 nt0.94□□□□□ -2.26
YJL107CP42947 YBR099CYBR099C 384 nt0.93□□□□□ -2.26
YJL107CP42947 PAU24YBR301W 363 nt0.93□□□□□ -2.26
YJL107CP42947 YSP1YHR155W 3687 nt0.91□□□□□ -2.26
YJL107CP42947 YJL127W-AYJL127W-A 117 nt0.91□□□□□ -2.26
YJL107CP42947 SEC1YDR164C 2175 nt0.91□□□□□ -2.26
YJL107CP42947 YBR072C-AYBR072C-A 162 nt0.89□□□□□ -2.27
YJL107CP42947 YGR146C-AYGR146C-A 162 nt0.84□□□□□ -2.27
YJL107CP42947 PMP2YEL017C-A 132 nt0.83□□□□□ -2.28
YJL107CP42947 GLG1YKR058W 1851 nt0.83□□□□□ -2.28
YJL107CP42947 YIL142C-AYIL142C-A 333 nt0.82□□□□□ -2.28
YJL107CP42947 YLL006W-AYLL006W-A 177 nt0.8□□□□□ -2.28
YJL107CP42947 NNF2YGR089W 2811 nt0.8□□□□□ -2.28
YJL107CP42947 ULP2YIL031W 3105 nt0.79□□□□□ -2.28
YJL107CP42947 UTP20YBL004W 7482 nt0.78□□□□□ -2.28
YJL107CP42947 YOR192C-BYOR192C-B 5313 nt0.78□□□□□ -2.28
YJL107CP42947 YNL103W-AYNL103W-A 90 nt0.78□□□□□ -2.28
YJL107CP42947 MYO1YHR023W 5787 nt0.77□□□□□ -2.29
YJL107CP42947 CSE1YGL238W 2883 nt0.77□□□□□ -2.29
YJL107CP42947 BIR1YJR089W 2865 nt0.77□□□□□ -2.29
YJL107CP42947 YNL266WYNL266W 420 nt0.75□□□□□ -2.29
YJL107CP42947 YMR160WYMR160W 2451 nt0.73□□□□□ -2.29
YJL107CP42947 RCO1YMR075W 2055 nt0.73□□□□□ -2.29
YJL107CP42947 LTE1YAL024C 4308 nt0.73□□□□□ -2.29
YJL107CP42947 tT(AGU)BtT(AGU)B 73 nt0.73□□□□□ -2.29
YJL107CP42947 tT(AGU)CtT(AGU)C 73 nt0.73□□□□□ -2.29
YJL107CP42947 tT(AGU)DtT(AGU)D 73 nt0.73□□□□□ -2.29
YJL107CP42947 tT(AGU)HtT(AGU)H 73 nt0.73□□□□□ -2.29
YJL107CP42947 tT(AGU)I1tT(AGU)I1 73 nt0.73□□□□□ -2.29
YJL107CP42947 tT(AGU)I2tT(AGU)I2 73 nt0.73□□□□□ -2.29
YJL107CP42947 tT(AGU)JtT(AGU)J 73 nt0.73□□□□□ -2.29
YJL107CP42947 tT(AGU)N1tT(AGU)N1 73 nt0.73□□□□□ -2.29
Retrieved 100 of 7,029 protein–RNA pairs in 24.9 ms