Protein–RNA interactions for Protein: P40985

HUL4, Probable E3 ubiquitin-protein ligase HUL4, yeastyeast

Predictions only

Length 892 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
HUL4P40985 PRP16YKR086W 3216 nt1.5□□□□□ -2.17
HUL4P40985 GEA2YEL022W 4380 nt1.5□□□□□ -2.17
HUL4P40985 SNU13YEL026W 381 nt1.49□□□□□ -2.17
HUL4P40985 YGR164WYGR164W 336 nt1.48□□□□□ -2.17
HUL4P40985 snR48snR48 113 nt1.48□□□□□ -2.17
HUL4P40985 QCR9YGR183C 201 nt1.47□□□□□ -2.17
HUL4P40985 SDH6YDR379C-A 240 nt1.46□□□□□ -2.18
HUL4P40985 YNL170WYNL170W 396 nt1.46□□□□□ -2.18
HUL4P40985 UTP8YGR128C 2142 nt1.46□□□□□ -2.18
HUL4P40985 YGL182CYGL182C 324 nt1.45□□□□□ -2.18
HUL4P40985 YOR102WYOR102W 351 nt1.45□□□□□ -2.18
HUL4P40985 HKR1YDR420W 5409 nt1.44□□□□□ -2.18
HUL4P40985 tH(GUG)E1tH(GUG)E1 72 nt1.44□□□□□ -2.18
HUL4P40985 tH(GUG)E2tH(GUG)E2 72 nt1.44□□□□□ -2.18
HUL4P40985 tH(GUG)G1tH(GUG)G1 72 nt1.44□□□□□ -2.18
HUL4P40985 tH(GUG)G2tH(GUG)G2 72 nt1.44□□□□□ -2.18
HUL4P40985 tH(GUG)HtH(GUG)H 72 nt1.44□□□□□ -2.18
HUL4P40985 tH(GUG)KtH(GUG)K 72 nt1.44□□□□□ -2.18
HUL4P40985 tH(GUG)MtH(GUG)M 72 nt1.44□□□□□ -2.18
HUL4P40985 YHL015W-AYHL015W-A 84 nt1.44□□□□□ -2.18
HUL4P40985 SEC8YPR055W 3198 nt1.44□□□□□ -2.18
HUL4P40985 tV(UAC)BtV(UAC)B 74 nt1.43□□□□□ -2.18
HUL4P40985 tV(UAC)DtV(UAC)D 74 nt1.43□□□□□ -2.18
HUL4P40985 FYV10YIL097W 1551 nt1.42□□□□□ -2.18
HUL4P40985 YBL039C-AYBL039C-A 84 nt1.42□□□□□ -2.18
HUL4P40985 RPM2YML091C 3609 nt1.41□□□□□ -2.18
HUL4P40985 RAD9YDR217C 3930 nt1.39□□□□□ -2.19
HUL4P40985 TAH1YCR060W 336 nt1.38□□□□□ -2.19
HUL4P40985 tF(GAA)BtF(GAA)B 73 nt1.38□□□□□ -2.19
HUL4P40985 tF(GAA)FtF(GAA)F 73 nt1.38□□□□□ -2.19
HUL4P40985 tF(GAA)GtF(GAA)G 73 nt1.38□□□□□ -2.19
HUL4P40985 tF(GAA)H1tF(GAA)H1 73 nt1.38□□□□□ -2.19
HUL4P40985 tF(GAA)H2tF(GAA)H2 73 nt1.38□□□□□ -2.19
HUL4P40985 tF(GAA)MtF(GAA)M 73 nt1.38□□□□□ -2.19
HUL4P40985 tF(GAA)P1tF(GAA)P1 73 nt1.38□□□□□ -2.19
HUL4P40985 tF(GAA)P2tF(GAA)P2 73 nt1.38□□□□□ -2.19
HUL4P40985 YLR399W-AYLR399W-A 105 nt1.38□□□□□ -2.19
HUL4P40985 YPR160W-AYPR160W-A 81 nt1.38□□□□□ -2.19
HUL4P40985 tL(UAA)QtL(UAA)Q 85 nt1.37□□□□□ -2.19
HUL4P40985 YOR314W-AYOR314W-A 111 nt1.37□□□□□ -2.19
HUL4P40985 DOP1YDR141C 5097 nt1.34□□□□□ -2.19
HUL4P40985 YIL020C-AYIL020C-A 339 nt1.34□□□□□ -2.19
HUL4P40985 UBP3YER151C 2739 nt1.33□□□□□ -2.2
HUL4P40985 CHS6YJL099W 2241 nt1.33□□□□□ -2.2
HUL4P40985 UTP20YBL004W 7482 nt1.33□□□□□ -2.2
HUL4P40985 YHR131W-AYHR131W-A 246 nt1.32□□□□□ -2.2
HUL4P40985 YLR232WYLR232W 348 nt1.32□□□□□ -2.2
HUL4P40985 NST1YNL091W 3723 nt1.3□□□□□ -2.2
HUL4P40985 YDL073WYDL073W 2955 nt1.29□□□□□ -2.2
HUL4P40985 SIP4YJL089W 2490 nt1.29□□□□□ -2.2
HUL4P40985 tN(GUU)QtN(GUU)Q 71 nt1.28□□□□□ -2.2
HUL4P40985 YOR329W-AYOR329W-A 210 nt1.26□□□□□ -2.21
HUL4P40985 YPR117WYPR117W 7470 nt1.26□□□□□ -2.21
HUL4P40985 YSP1YHR155W 3687 nt1.24□□□□□ -2.21
HUL4P40985 SPT7YBR081C 3999 nt1.24□□□□□ -2.21
HUL4P40985 BEM2YER155C 6504 nt1.23□□□□□ -2.21
HUL4P40985 OST4YDL232W 111 nt1.2□□□□□ -2.22
HUL4P40985 YOL014WYOL014W 375 nt1.2□□□□□ -2.22
HUL4P40985 snR39BsnR39B 96 nt1.2□□□□□ -2.22
HUL4P40985 BUD3YCL014W 4911 nt1.2□□□□□ -2.22
HUL4P40985 YDR544CYDR544C 429 nt1.19□□□□□ -2.22
HUL4P40985 SCC2YDR180W 4482 nt1.19□□□□□ -2.22
HUL4P40985 COG6YNL041C 2520 nt1.17□□□□□ -2.22
HUL4P40985 YNL067W-BYNL067W-B 141 nt1.16□□□□□ -2.22
HUL4P40985 VAM6YDL077C 3150 nt1.16□□□□□ -2.22
HUL4P40985 BEM3YPL115C 3387 nt1.15□□□□□ -2.22
HUL4P40985 tM(CAU)Q2tM(CAU)Q2 78 nt1.15□□□□□ -2.23
HUL4P40985 YCL001W-BYCL001W-B 255 nt1.15□□□□□ -2.23
HUL4P40985 Q0143Q0143 153 nt1.14□□□□□ -2.23
HUL4P40985 ULP2YIL031W 3105 nt1.13□□□□□ -2.23
HUL4P40985 SEC1YDR164C 2175 nt1.13□□□□□ -2.23
HUL4P40985 BIR1YJR089W 2865 nt1.12□□□□□ -2.23
HUL4P40985 RKR1YMR247C 4689 nt1.12□□□□□ -2.23
HUL4P40985 YDR210WYDR210W 228 nt1.11□□□□□ -2.23
HUL4P40985 YCR095W-AYCR095W-A 159 nt1.09□□□□□ -2.23
HUL4P40985 GLG1YKR058W 1851 nt1.08□□□□□ -2.24
HUL4P40985 YJR029WYJR029W 5268 nt1.08□□□□□ -2.24
HUL4P40985 YPR137C-BYPR137C-B 5268 nt1.08□□□□□ -2.24
HUL4P40985 YIL071W-AYIL071W-A 477 nt1.08□□□□□ -2.24
HUL4P40985 YBR072C-AYBR072C-A 162 nt1.07□□□□□ -2.24
HUL4P40985 LTE1YAL024C 4308 nt1.06□□□□□ -2.24
HUL4P40985 EMT1tM(CAU)D 73 nt1.06□□□□□ -2.24
HUL4P40985 EMT5tM(CAU)J1 73 nt1.06□□□□□ -2.24
HUL4P40985 EMT3tM(CAU)J2 73 nt1.06□□□□□ -2.24
HUL4P40985 EMT4tM(CAU)M 73 nt1.06□□□□□ -2.24
HUL4P40985 EMT2tM(CAU)O2 73 nt1.06□□□□□ -2.24
HUL4P40985 YGR146C-AYGR146C-A 162 nt1.06□□□□□ -2.24
HUL4P40985 YIL142C-AYIL142C-A 333 nt1.06□□□□□ -2.24
HUL4P40985 YPL060C-AYPL060C-A 3315 nt1.05□□□□□ -2.24
HUL4P40985 SOM1YEL059C-A 225 nt1.04□□□□□ -2.24
HUL4P40985 YJL127W-AYJL127W-A 117 nt1.04□□□□□ -2.24
HUL4P40985 YMR160WYMR160W 2451 nt1.04□□□□□ -2.24
HUL4P40985 NNF2YGR089W 2811 nt1.01□□□□□ -2.25
HUL4P40985 BUL2YML111W 2763 nt0.99□□□□□ -2.25
HUL4P40985 YKL145W-AYKL145W-A 93 nt0.99□□□□□ -2.25
HUL4P40985 YLL006W-AYLL006W-A 177 nt0.99□□□□□ -2.25
HUL4P40985 MYO1YHR023W 5787 nt0.98□□□□□ -2.25
HUL4P40985 snR85snR85 171 nt0.98□□□□□ -2.25
HUL4P40985 YNL205CYNL205C 423 nt0.98□□□□□ -2.25
HUL4P40985 YBR099CYBR099C 384 nt0.98□□□□□ -2.25
Retrieved 100 of 7,029 protein–RNA pairs in 62.3 ms