Protein–RNA interactions for Protein: P40541

IRR1, Cohesin subunit SCC3, yeastyeast

Predictions only

Length 1,150 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
IRR1P40541 tL(UAA)QtL(UAA)Q 85 nt1.54□□□□□ -2.16
IRR1P40541 YBL039C-AYBL039C-A 84 nt1.54□□□□□ -2.16
IRR1P40541 SEC21YNL287W 2808 nt1.53□□□□□ -2.16
IRR1P40541 FYV10YIL097W 1551 nt1.53□□□□□ -2.16
IRR1P40541 CCH1YGR217W 6120 nt1.52□□□□□ -2.17
IRR1P40541 NUP192YJL039C 5052 nt1.52□□□□□ -2.17
IRR1P40541 HKR1YDR420W 5409 nt1.52□□□□□ -2.17
IRR1P40541 CHS6YJL099W 2241 nt1.51□□□□□ -2.17
IRR1P40541 TAH1YCR060W 336 nt1.51□□□□□ -2.17
IRR1P40541 FYV8YGR196C 2454 nt1.51□□□□□ -2.17
IRR1P40541 YCL001W-BYCL001W-B 255 nt1.5□□□□□ -2.17
IRR1P40541 SEC8YPR055W 3198 nt1.47□□□□□ -2.17
IRR1P40541 KAP120YPL125W 3099 nt1.47□□□□□ -2.17
IRR1P40541 YOR329W-AYOR329W-A 210 nt1.47□□□□□ -2.17
IRR1P40541 CAT8YMR280C 4302 nt1.46□□□□□ -2.18
IRR1P40541 YLR232WYLR232W 348 nt1.44□□□□□ -2.18
IRR1P40541 RAD9YDR217C 3930 nt1.43□□□□□ -2.18
IRR1P40541 YLR399W-AYLR399W-A 105 nt1.42□□□□□ -2.18
IRR1P40541 PRP16YKR086W 3216 nt1.4□□□□□ -2.18
IRR1P40541 YPR160W-AYPR160W-A 81 nt1.4□□□□□ -2.19
IRR1P40541 YHR131W-AYHR131W-A 246 nt1.39□□□□□ -2.19
IRR1P40541 YIL071W-AYIL071W-A 477 nt1.38□□□□□ -2.19
IRR1P40541 QCR9YGR183C 201 nt1.37□□□□□ -2.19
IRR1P40541 YNL067W-BYNL067W-B 141 nt1.36□□□□□ -2.19
IRR1P40541 YDR544CYDR544C 429 nt1.35□□□□□ -2.19
IRR1P40541 snR39BsnR39B 96 nt1.35□□□□□ -2.19
IRR1P40541 OST4YDL232W 111 nt1.34□□□□□ -2.19
IRR1P40541 tM(CAU)Q2tM(CAU)Q2 78 nt1.34□□□□□ -2.19
IRR1P40541 tN(GUU)QtN(GUU)Q 71 nt1.34□□□□□ -2.19
IRR1P40541 tH(GUG)E1tH(GUG)E1 72 nt1.33□□□□□ -2.2
IRR1P40541 tH(GUG)E2tH(GUG)E2 72 nt1.33□□□□□ -2.2
IRR1P40541 tH(GUG)G1tH(GUG)G1 72 nt1.33□□□□□ -2.2
IRR1P40541 tH(GUG)G2tH(GUG)G2 72 nt1.33□□□□□ -2.2
IRR1P40541 tH(GUG)HtH(GUG)H 72 nt1.33□□□□□ -2.2
IRR1P40541 tH(GUG)KtH(GUG)K 72 nt1.33□□□□□ -2.2
IRR1P40541 tH(GUG)MtH(GUG)M 72 nt1.33□□□□□ -2.2
IRR1P40541 YCR095W-AYCR095W-A 159 nt1.32□□□□□ -2.2
IRR1P40541 NST1YNL091W 3723 nt1.32□□□□□ -2.2
IRR1P40541 BEM3YPL115C 3387 nt1.31□□□□□ -2.2
IRR1P40541 YBL109WYBL109W 336 nt1.31□□□□□ -2.2
IRR1P40541 YBR099CYBR099C 384 nt1.31□□□□□ -2.2
IRR1P40541 RPM2YML091C 3609 nt1.31□□□□□ -2.2
IRR1P40541 MSH3YCR092C 3057 nt1.3□□□□□ -2.2
IRR1P40541 SPT7YBR081C 3999 nt1.3□□□□□ -2.2
IRR1P40541 YSP1YHR155W 3687 nt1.29□□□□□ -2.2
IRR1P40541 YDR524C-AYDR524C-A 120 nt1.28□□□□□ -2.2
IRR1P40541 PMP2YEL017C-A 132 nt1.28□□□□□ -2.2
IRR1P40541 SOM1YEL059C-A 225 nt1.28□□□□□ -2.2
IRR1P40541 COG6YNL041C 2520 nt1.28□□□□□ -2.2
IRR1P40541 YNL103W-AYNL103W-A 90 nt1.27□□□□□ -2.21
IRR1P40541 YDL073WYDL073W 2955 nt1.26□□□□□ -2.21
IRR1P40541 UBP3YER151C 2739 nt1.26□□□□□ -2.21
IRR1P40541 YBR178WYBR178W 375 nt1.25□□□□□ -2.21
IRR1P40541 YGR130CYGR130C 2451 nt1.25□□□□□ -2.21
IRR1P40541 YNL284C-BYNL284C-B 5268 nt1.24□□□□□ -2.21
IRR1P40541 TFB5YDR079C-A 219 nt1.24□□□□□ -2.21
IRR1P40541 YDR210WYDR210W 228 nt1.23□□□□□ -2.21
IRR1P40541 YJL127W-AYJL127W-A 117 nt1.21□□□□□ -2.22
IRR1P40541 LAA1YJL207C 6045 nt1.21□□□□□ -2.22
IRR1P40541 SEC1YDR164C 2175 nt1.21□□□□□ -2.22
IRR1P40541 YGR146C-AYGR146C-A 162 nt1.18□□□□□ -2.22
IRR1P40541 tV(UAC)BtV(UAC)B 74 nt1.17□□□□□ -2.22
IRR1P40541 tV(UAC)DtV(UAC)D 74 nt1.17□□□□□ -2.22
IRR1P40541 YBR072C-AYBR072C-A 162 nt1.17□□□□□ -2.22
IRR1P40541 SCC2YDR180W 4482 nt1.16□□□□□ -2.22
IRR1P40541 GLG1YKR058W 1851 nt1.16□□□□□ -2.22
IRR1P40541 ULP2YIL031W 3105 nt1.15□□□□□ -2.22
IRR1P40541 VAM6YDL077C 3150 nt1.15□□□□□ -2.22
IRR1P40541 RCO1YMR075W 2055 nt1.15□□□□□ -2.23
IRR1P40541 MYO1YHR023W 5787 nt1.15□□□□□ -2.23
IRR1P40541 RKR1YMR247C 4689 nt1.14□□□□□ -2.23
IRR1P40541 snR61snR61 90 nt1.14□□□□□ -2.23
IRR1P40541 STF2YGR008C 255 nt1.14□□□□□ -2.23
IRR1P40541 YMR326CYMR326C 309 nt1.14□□□□□ -2.23
IRR1P40541 SIP4YJL089W 2490 nt1.14□□□□□ -2.23
IRR1P40541 IML1YJR138W 4755 nt1.13□□□□□ -2.23
IRR1P40541 BEM2YER155C 6504 nt1.13□□□□□ -2.23
IRR1P40541 BUD3YCL014W 4911 nt1.12□□□□□ -2.23
IRR1P40541 YPR117WYPR117W 7470 nt1.12□□□□□ -2.23
IRR1P40541 YJR029WYJR029W 5268 nt1.1□□□□□ -2.23
IRR1P40541 YPR137C-BYPR137C-B 5268 nt1.1□□□□□ -2.23
IRR1P40541 EMT1tM(CAU)D 73 nt1.09□□□□□ -2.23
IRR1P40541 EMT5tM(CAU)J1 73 nt1.09□□□□□ -2.23
IRR1P40541 EMT3tM(CAU)J2 73 nt1.09□□□□□ -2.23
IRR1P40541 EMT4tM(CAU)M 73 nt1.09□□□□□ -2.23
IRR1P40541 EMT2tM(CAU)O2 73 nt1.09□□□□□ -2.23
IRR1P40541 YHR217CYHR217C 462 nt1.09□□□□□ -2.23
IRR1P40541 YGL041C-BYGL041C-B 183 nt1.07□□□□□ -2.24
IRR1P40541 BIR1YJR089W 2865 nt1.07□□□□□ -2.24
IRR1P40541 DOP1YDR141C 5097 nt1.07□□□□□ -2.24
IRR1P40541 NNF2YGR089W 2811 nt1.07□□□□□ -2.24
IRR1P40541 YLL006W-AYLL006W-A 177 nt1.06□□□□□ -2.24
IRR1P40541 YNL266WYNL266W 420 nt1.01□□□□□ -2.25
IRR1P40541 LTE1YAL024C 4308 nt0.99□□□□□ -2.25
IRR1P40541 SBH1YER087C-B 249 nt0.98□□□□□ -2.25
IRR1P40541 CSE1YGL238W 2883 nt0.97□□□□□ -2.25
IRR1P40541 NIP1YMR309C 2439 nt0.96□□□□□ -2.26
IRR1P40541 YOR192C-BYOR192C-B 5313 nt0.95□□□□□ -2.26
IRR1P40541 snR81snR81 201 nt0.95□□□□□ -2.26
IRR1P40541 HUG1YML058W-A 207 nt0.95□□□□□ -2.26
Retrieved 100 of 7,029 protein–RNA pairs in 14.5 ms