Protein–RNA interactions for Protein: P40107

VRG4, GDP-mannose transporter 1, yeastyeast

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VRG4P40107 YBL039C-AYBL039C-A 84 nt1.23□□□□□ -2.21
VRG4P40107 AZF1YOR113W 2745 nt1.22□□□□□ -2.21
VRG4P40107 tH(GUG)E1tH(GUG)E1 72 nt1.22□□□□□ -2.21
VRG4P40107 tH(GUG)E2tH(GUG)E2 72 nt1.22□□□□□ -2.21
VRG4P40107 tH(GUG)G1tH(GUG)G1 72 nt1.22□□□□□ -2.21
VRG4P40107 tH(GUG)G2tH(GUG)G2 72 nt1.22□□□□□ -2.21
VRG4P40107 tH(GUG)HtH(GUG)H 72 nt1.22□□□□□ -2.21
VRG4P40107 tH(GUG)KtH(GUG)K 72 nt1.22□□□□□ -2.21
VRG4P40107 tH(GUG)MtH(GUG)M 72 nt1.22□□□□□ -2.21
VRG4P40107 CMC4YMR194C-B 222 nt1.22□□□□□ -2.21
VRG4P40107 PRP16YKR086W 3216 nt1.22□□□□□ -2.21
VRG4P40107 COX5BYIL111W 456 nt1.21□□□□□ -2.22
VRG4P40107 YLR282CYLR282C 342 nt1.21□□□□□ -2.22
VRG4P40107 YBR200W-AYBR200W-A 165 nt1.21□□□□□ -2.22
VRG4P40107 snR39BsnR39B 96 nt1.2□□□□□ -2.22
VRG4P40107 UBP3YER151C 2739 nt1.2□□□□□ -2.22
VRG4P40107 WAR1YML076C 2835 nt1.2□□□□□ -2.22
VRG4P40107 CHS6YJL099W 2241 nt1.19□□□□□ -2.22
VRG4P40107 YLL020CYLL020C 306 nt1.19□□□□□ -2.22
VRG4P40107 YBL109WYBL109W 336 nt1.19□□□□□ -2.22
VRG4P40107 GEA2YEL022W 4380 nt1.19□□□□□ -2.22
VRG4P40107 OST4YDL232W 111 nt1.18□□□□□ -2.22
VRG4P40107 RAD9YDR217C 3930 nt1.18□□□□□ -2.22
VRG4P40107 YLR041WYLR041W 321 nt1.17□□□□□ -2.22
VRG4P40107 NST1YNL091W 3723 nt1.17□□□□□ -2.22
VRG4P40107 TAH1YCR060W 336 nt1.16□□□□□ -2.22
VRG4P40107 YGR130CYGR130C 2451 nt1.16□□□□□ -2.22
VRG4P40107 YCR095W-AYCR095W-A 159 nt1.15□□□□□ -2.23
VRG4P40107 COG6YNL041C 2520 nt1.15□□□□□ -2.23
VRG4P40107 UTP8YGR128C 2142 nt1.15□□□□□ -2.23
VRG4P40107 MYO1YHR023W 5787 nt1.14□□□□□ -2.23
VRG4P40107 YBR099CYBR099C 384 nt1.14□□□□□ -2.23
VRG4P40107 YML002WYML002W 2214 nt1.13□□□□□ -2.23
VRG4P40107 FYV10YIL097W 1551 nt1.13□□□□□ -2.23
VRG4P40107 YHR131W-AYHR131W-A 246 nt1.13□□□□□ -2.23
VRG4P40107 YKL100W-AYKL100W-A 90 nt1.13□□□□□ -2.23
VRG4P40107 snR190snR190 190 nt1.13□□□□□ -2.23
VRG4P40107 YDR524C-AYDR524C-A 120 nt1.12□□□□□ -2.23
VRG4P40107 RPL26BYGR034W 384 nt1.12□□□□□ -2.23
VRG4P40107 QCR9YGR183C 201 nt1.12□□□□□ -2.23
VRG4P40107 YNL067W-BYNL067W-B 141 nt1.12□□□□□ -2.23
VRG4P40107 YNL103W-AYNL103W-A 90 nt1.12□□□□□ -2.23
VRG4P40107 YBR178WYBR178W 375 nt1.12□□□□□ -2.23
VRG4P40107 YDL073WYDL073W 2955 nt1.12□□□□□ -2.23
VRG4P40107 RPM2YML091C 3609 nt1.11□□□□□ -2.23
VRG4P40107 SMC1YFL008W 3678 nt1.11□□□□□ -2.23
VRG4P40107 PMP2YEL017C-A 132 nt1.11□□□□□ -2.23
VRG4P40107 DOP1YDR141C 5097 nt1.11□□□□□ -2.23
VRG4P40107 IML1YJR138W 4755 nt1.11□□□□□ -2.23
VRG4P40107 BEM2YER155C 6504 nt1.1□□□□□ -2.23
VRG4P40107 YDR544CYDR544C 429 nt1.1□□□□□ -2.23
VRG4P40107 SOM1YEL059C-A 225 nt1.09□□□□□ -2.23
VRG4P40107 STF2YGR008C 255 nt1.09□□□□□ -2.23
VRG4P40107 RCO1YMR075W 2055 nt1.08□□□□□ -2.24
VRG4P40107 TFB5YDR079C-A 219 nt1.08□□□□□ -2.24
VRG4P40107 SIP4YJL089W 2490 nt1.07□□□□□ -2.24
VRG4P40107 YDR210WYDR210W 228 nt1.06□□□□□ -2.24
VRG4P40107 YLR232WYLR232W 348 nt1.06□□□□□ -2.24
VRG4P40107 SEC8YPR055W 3198 nt1.05□□□□□ -2.24
VRG4P40107 tN(GUU)QtN(GUU)Q 71 nt1.05□□□□□ -2.24
VRG4P40107 HUG1YML058W-A 207 nt1.05□□□□□ -2.24
VRG4P40107 SEC1YDR164C 2175 nt1.04□□□□□ -2.24
VRG4P40107 tV(UAC)BtV(UAC)B 74 nt1.04□□□□□ -2.24
VRG4P40107 tV(UAC)DtV(UAC)D 74 nt1.04□□□□□ -2.24
VRG4P40107 YPR160W-AYPR160W-A 81 nt1.04□□□□□ -2.24
VRG4P40107 tM(CAU)Q2tM(CAU)Q2 78 nt1.03□□□□□ -2.24
VRG4P40107 YLR399W-AYLR399W-A 105 nt1.02□□□□□ -2.25
VRG4P40107 SCC2YDR180W 4482 nt1.01□□□□□ -2.25
VRG4P40107 snR61snR61 90 nt1.01□□□□□ -2.25
VRG4P40107 VAM6YDL077C 3150 nt1□□□□□ -2.25
VRG4P40107 YPL060C-AYPL060C-A 3315 nt1□□□□□ -2.25
VRG4P40107 YPR117WYPR117W 7470 nt1□□□□□ -2.25
VRG4P40107 YSP1YHR155W 3687 nt0.99□□□□□ -2.25
VRG4P40107 YMR326CYMR326C 309 nt0.98□□□□□ -2.25
VRG4P40107 YHR217CYHR217C 462 nt0.97□□□□□ -2.25
VRG4P40107 UTP20YBL004W 7482 nt0.97□□□□□ -2.25
VRG4P40107 YJL127W-AYJL127W-A 117 nt0.96□□□□□ -2.26
VRG4P40107 SPT7YBR081C 3999 nt0.95□□□□□ -2.26
VRG4P40107 YGL041C-BYGL041C-B 183 nt0.94□□□□□ -2.26
VRG4P40107 EMT1tM(CAU)D 73 nt0.94□□□□□ -2.26
VRG4P40107 EMT5tM(CAU)J1 73 nt0.94□□□□□ -2.26
VRG4P40107 EMT3tM(CAU)J2 73 nt0.94□□□□□ -2.26
VRG4P40107 EMT4tM(CAU)M 73 nt0.94□□□□□ -2.26
VRG4P40107 EMT2tM(CAU)O2 73 nt0.94□□□□□ -2.26
VRG4P40107 RKR1YMR247C 4689 nt0.94□□□□□ -2.26
VRG4P40107 YJR029WYJR029W 5268 nt0.94□□□□□ -2.26
VRG4P40107 YPR137C-BYPR137C-B 5268 nt0.94□□□□□ -2.26
VRG4P40107 NNF2YGR089W 2811 nt0.93□□□□□ -2.26
VRG4P40107 BIR1YJR089W 2865 nt0.93□□□□□ -2.26
VRG4P40107 YGR146C-AYGR146C-A 162 nt0.93□□□□□ -2.26
VRG4P40107 YNL266WYNL266W 420 nt0.9□□□□□ -2.27
VRG4P40107 snR81snR81 201 nt0.87□□□□□ -2.27
VRG4P40107 SBH1YER087C-B 249 nt0.87□□□□□ -2.27
VRG4P40107 YBR072C-AYBR072C-A 162 nt0.87□□□□□ -2.27
VRG4P40107 BEM3YPL115C 3387 nt0.87□□□□□ -2.27
VRG4P40107 PAU24YBR301W 363 nt0.86□□□□□ -2.27
VRG4P40107 ULP2YIL031W 3105 nt0.85□□□□□ -2.27
VRG4P40107 BUL2YML111W 2763 nt0.84□□□□□ -2.27
VRG4P40107 YNL054W-BYNL054W-B 5250 nt0.83□□□□□ -2.28
VRG4P40107 GLG1YKR058W 1851 nt0.82□□□□□ -2.28
Retrieved 100 of 7,029 protein–RNA pairs in 26.7 ms