Protein–RNA interactions for Protein: P39968

VAC8, Vacuolar protein 8, yeastyeast

Predictions only

Length 578 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VAC8P39968 YBL039C-AYBL039C-A 84 nt1.46□□□□□ -2.18
VAC8P39968 YNL170WYNL170W 396 nt1.46□□□□□ -2.18
VAC8P39968 YPR160W-AYPR160W-A 81 nt1.46□□□□□ -2.18
VAC8P39968 CCH1YGR217W 6120 nt1.46□□□□□ -2.18
VAC8P39968 NST1YNL091W 3723 nt1.45□□□□□ -2.18
VAC8P39968 SDH6YDR379C-A 240 nt1.45□□□□□ -2.18
VAC8P39968 LAA1YJL207C 6045 nt1.44□□□□□ -2.18
VAC8P39968 HKR1YDR420W 5409 nt1.44□□□□□ -2.18
VAC8P39968 YOR314W-AYOR314W-A 111 nt1.44□□□□□ -2.18
VAC8P39968 TAH1YCR060W 336 nt1.43□□□□□ -2.18
VAC8P39968 YIL020C-AYIL020C-A 339 nt1.43□□□□□ -2.18
VAC8P39968 YLR232WYLR232W 348 nt1.42□□□□□ -2.18
VAC8P39968 YSP1YHR155W 3687 nt1.41□□□□□ -2.18
VAC8P39968 YHR131W-AYHR131W-A 246 nt1.4□□□□□ -2.19
VAC8P39968 CHS6YJL099W 2241 nt1.4□□□□□ -2.19
VAC8P39968 YGR130CYGR130C 2451 nt1.39□□□□□ -2.19
VAC8P39968 tH(GUG)E1tH(GUG)E1 72 nt1.38□□□□□ -2.19
VAC8P39968 tH(GUG)E2tH(GUG)E2 72 nt1.38□□□□□ -2.19
VAC8P39968 tH(GUG)G1tH(GUG)G1 72 nt1.38□□□□□ -2.19
VAC8P39968 tH(GUG)G2tH(GUG)G2 72 nt1.38□□□□□ -2.19
VAC8P39968 tH(GUG)HtH(GUG)H 72 nt1.38□□□□□ -2.19
VAC8P39968 tH(GUG)KtH(GUG)K 72 nt1.38□□□□□ -2.19
VAC8P39968 tH(GUG)MtH(GUG)M 72 nt1.38□□□□□ -2.19
VAC8P39968 YBL053WYBL053W 375 nt1.38□□□□□ -2.19
VAC8P39968 LTE1YAL024C 4308 nt1.37□□□□□ -2.19
VAC8P39968 IML1YJR138W 4755 nt1.35□□□□□ -2.19
VAC8P39968 tL(UAA)QtL(UAA)Q 85 nt1.34□□□□□ -2.19
VAC8P39968 SCC2YDR180W 4482 nt1.34□□□□□ -2.2
VAC8P39968 PIK1YNL267W 3201 nt1.33□□□□□ -2.2
VAC8P39968 PET127YOR017W 2403 nt1.32□□□□□ -2.2
VAC8P39968 UBP3YER151C 2739 nt1.32□□□□□ -2.2
VAC8P39968 FYV8YGR196C 2454 nt1.32□□□□□ -2.2
VAC8P39968 tQ(UUG)E2tQ(UUG)E2 72 nt1.3□□□□□ -2.2
VAC8P39968 BEM3YPL115C 3387 nt1.3□□□□□ -2.2
VAC8P39968 YDL073WYDL073W 2955 nt1.29□□□□□ -2.2
VAC8P39968 tN(GUU)QtN(GUU)Q 71 nt1.28□□□□□ -2.2
VAC8P39968 tV(UAC)BtV(UAC)B 74 nt1.28□□□□□ -2.2
VAC8P39968 tV(UAC)DtV(UAC)D 74 nt1.28□□□□□ -2.2
VAC8P39968 YOR329W-AYOR329W-A 210 nt1.27□□□□□ -2.21
VAC8P39968 SPT7YBR081C 3999 nt1.26□□□□□ -2.21
VAC8P39968 YNL284C-BYNL284C-B 5268 nt1.26□□□□□ -2.21
VAC8P39968 ULP2YIL031W 3105 nt1.25□□□□□ -2.21
VAC8P39968 OST4YDL232W 111 nt1.25□□□□□ -2.21
VAC8P39968 tM(CAU)Q2tM(CAU)Q2 78 nt1.24□□□□□ -2.21
VAC8P39968 QCR9YGR183C 201 nt1.22□□□□□ -2.21
VAC8P39968 COG6YNL041C 2520 nt1.22□□□□□ -2.21
VAC8P39968 SIP4YJL089W 2490 nt1.22□□□□□ -2.21
VAC8P39968 YNL067W-BYNL067W-B 141 nt1.2□□□□□ -2.22
VAC8P39968 YPR117WYPR117W 7470 nt1.19□□□□□ -2.22
VAC8P39968 GLG1YKR058W 1851 nt1.18□□□□□ -2.22
VAC8P39968 YCR095W-AYCR095W-A 159 nt1.18□□□□□ -2.22
VAC8P39968 YDR544CYDR544C 429 nt1.17□□□□□ -2.22
VAC8P39968 snR39BsnR39B 96 nt1.16□□□□□ -2.22
VAC8P39968 STF2YGR008C 255 nt1.14□□□□□ -2.23
VAC8P39968 YGR146C-AYGR146C-A 162 nt1.14□□□□□ -2.23
VAC8P39968 YBR072C-AYBR072C-A 162 nt1.14□□□□□ -2.23
VAC8P39968 IQG1YPL242C 4488 nt1.13□□□□□ -2.23
VAC8P39968 YCL001W-BYCL001W-B 255 nt1.12□□□□□ -2.23
VAC8P39968 YJR029WYJR029W 5268 nt1.11□□□□□ -2.23
VAC8P39968 YPR137C-BYPR137C-B 5268 nt1.11□□□□□ -2.23
VAC8P39968 HUG1YML058W-A 207 nt1.11□□□□□ -2.23
VAC8P39968 SEC1YDR164C 2175 nt1.1□□□□□ -2.23
VAC8P39968 YJL127W-AYJL127W-A 117 nt1.1□□□□□ -2.23
VAC8P39968 YDR210WYDR210W 228 nt1.09□□□□□ -2.23
VAC8P39968 SOM1YEL059C-A 225 nt1.09□□□□□ -2.23
VAC8P39968 NNF2YGR089W 2811 nt1.07□□□□□ -2.24
VAC8P39968 DOP1YDR141C 5097 nt1.07□□□□□ -2.24
VAC8P39968 EMT1tM(CAU)D 73 nt1.05□□□□□ -2.24
VAC8P39968 EMT5tM(CAU)J1 73 nt1.05□□□□□ -2.24
VAC8P39968 EMT3tM(CAU)J2 73 nt1.05□□□□□ -2.24
VAC8P39968 EMT4tM(CAU)M 73 nt1.05□□□□□ -2.24
VAC8P39968 EMT2tM(CAU)O2 73 nt1.05□□□□□ -2.24
VAC8P39968 YLL006W-AYLL006W-A 177 nt1.05□□□□□ -2.24
VAC8P39968 MLP1YKR095W 5628 nt1.04□□□□□ -2.24
VAC8P39968 RKR1YMR247C 4689 nt1.03□□□□□ -2.24
VAC8P39968 YNL205CYNL205C 423 nt1.02□□□□□ -2.25
VAC8P39968 YPL060C-AYPL060C-A 3315 nt1.01□□□□□ -2.25
VAC8P39968 BEM2YER155C 6504 nt1□□□□□ -2.25
VAC8P39968 Q0143Q0143 153 nt1□□□□□ -2.25
VAC8P39968 VAM6YDL077C 3150 nt0.99□□□□□ -2.25
VAC8P39968 YBR099CYBR099C 384 nt0.99□□□□□ -2.25
VAC8P39968 BUL2YML111W 2763 nt0.98□□□□□ -2.25
VAC8P39968 YIL071W-AYIL071W-A 477 nt0.98□□□□□ -2.25
VAC8P39968 NIP1YMR309C 2439 nt0.98□□□□□ -2.25
VAC8P39968 PET111YMR257C 2403 nt0.96□□□□□ -2.26
VAC8P39968 BUD3YCL014W 4911 nt0.96□□□□□ -2.26
VAC8P39968 BIR1YJR089W 2865 nt0.94□□□□□ -2.26
VAC8P39968 RPS26AYGL189C 360 nt0.89□□□□□ -2.27
VAC8P39968 PAU24YBR301W 363 nt0.89□□□□□ -2.27
VAC8P39968 CSE1YGL238W 2883 nt0.88□□□□□ -2.27
VAC8P39968 MLP2YIL149C 5040 nt0.88□□□□□ -2.27
VAC8P39968 YNL054W-BYNL054W-B 5250 nt0.87□□□□□ -2.27
VAC8P39968 PAU12YGR294W 363 nt0.87□□□□□ -2.27
VAC8P39968 YPR159C-AYPR159C-A 102 nt0.87□□□□□ -2.27
VAC8P39968 YIL142C-AYIL142C-A 333 nt0.86□□□□□ -2.27
VAC8P39968 YDR371C-AYDR371C-A 105 nt0.85□□□□□ -2.27
VAC8P39968 snR85snR85 171 nt0.84□□□□□ -2.27
VAC8P39968 YNL266WYNL266W 420 nt0.84□□□□□ -2.27
VAC8P39968 RCO1YMR075W 2055 nt0.84□□□□□ -2.28
VAC8P39968 UTP20YBL004W 7482 nt0.83□□□□□ -2.28
Retrieved 100 of 7,029 protein–RNA pairs in 78.1 ms