Protein–RNA interactions for Protein: P38998

LYS1, Saccharopine dehydrogenase [NAD(+), L-lysine-forming], yeastyeast

RIP-Chip data

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
LYS1P38998 QCR9YGR183C 201 nt0.76□□□□□ -2.29
LYS1P38998 COX5BYIL111W 456 nt0.76□□□□□ -2.29
LYS1P38998 YOR302WYOR302W 78 nt0.76□□□□□ -2.29 RIP-Chip
LYS1P38998 PRP5YBR237W 2550 nt0.74□□□□□ -2.29 RIP-Chip
LYS1P38998 HAL9YOL089C 3093 nt0.74□□□□□ -2.29
LYS1P38998 YDR366CYDR366C 399 nt0.74□□□□□ -2.29
LYS1P38998 ULI1YFR026C 510 nt0.74□□□□□ -2.29
LYS1P38998 MYO1YHR023W 5787 nt0.74□□□□□ -2.29
LYS1P38998 YKL100W-AYKL100W-A 90 nt0.73□□□□□ -2.29
LYS1P38998 FYV10YIL097W 1551 nt0.73□□□□□ -2.29
LYS1P38998 YML002WYML002W 2214 nt0.72□□□□□ -2.29
LYS1P38998 YER053C-AYER053C-A 114 nt0.71□□□□□ -2.3
LYS1P38998 YIL002W-AYIL002W-A 210 nt0.71□□□□□ -2.3
LYS1P38998 YBR131C-AYBR131C-A 90 nt0.71□□□□□ -2.3
LYS1P38998 SEC1YDR164C 2175 nt0.71□□□□□ -2.3
LYS1P38998 YCR038W-AYCR038W-A 126 nt0.7□□□□□ -2.3
LYS1P38998 tN(GUU)QtN(GUU)Q 71 nt0.7□□□□□ -2.3
LYS1P38998 YLR041WYLR041W 321 nt0.7□□□□□ -2.3
LYS1P38998 YNL097C-BYNL097C-B 123 nt0.7□□□□□ -2.3
LYS1P38998 YMR160WYMR160W 2451 nt0.7□□□□□ -2.3 RIP-Chip
LYS1P38998 OST4YDL232W 111 nt0.69□□□□□ -2.3
LYS1P38998 tT(AGU)BtT(AGU)B 73 nt0.68□□□□□ -2.3
LYS1P38998 tT(AGU)CtT(AGU)C 73 nt0.68□□□□□ -2.3
LYS1P38998 tT(AGU)DtT(AGU)D 73 nt0.68□□□□□ -2.3
LYS1P38998 tT(AGU)HtT(AGU)H 73 nt0.68□□□□□ -2.3
LYS1P38998 tT(AGU)I1tT(AGU)I1 73 nt0.68□□□□□ -2.3
LYS1P38998 tT(AGU)I2tT(AGU)I2 73 nt0.68□□□□□ -2.3
LYS1P38998 tT(AGU)JtT(AGU)J 73 nt0.68□□□□□ -2.3
LYS1P38998 tT(AGU)N1tT(AGU)N1 73 nt0.68□□□□□ -2.3
LYS1P38998 tT(AGU)N2tT(AGU)N2 73 nt0.68□□□□□ -2.3
LYS1P38998 tT(AGU)O1tT(AGU)O1 73 nt0.68□□□□□ -2.3
LYS1P38998 tT(AGU)O2tT(AGU)O2 73 nt0.68□□□□□ -2.3
LYS1P38998 APQ12YIL040W 417 nt0.68□□□□□ -2.3
LYS1P38998 PRP42YDR235W 1635 nt0.67□□□□□ -2.3
LYS1P38998 YOL014WYOL014W 375 nt0.65□□□□□ -2.31
LYS1P38998 UTP20YBL004W 7482 nt0.64□□□□□ -2.31
LYS1P38998 YJL127W-AYJL127W-A 117 nt0.64□□□□□ -2.31
LYS1P38998 YKL145W-AYKL145W-A 93 nt0.64□□□□□ -2.31
LYS1P38998 LTE1YAL024C 4308 nt0.63□□□□□ -2.31
LYS1P38998 YHR131W-AYHR131W-A 246 nt0.62□□□□□ -2.31
LYS1P38998 YMR158W-BYMR158W-B 321 nt0.61□□□□□ -2.31
LYS1P38998 YPR159C-AYPR159C-A 102 nt0.61□□□□□ -2.31
LYS1P38998 TRS65YGR166W 1683 nt0.6□□□□□ -2.31
LYS1P38998 SNU13YEL026W 381 nt0.59□□□□□ -2.31
LYS1P38998 YSP1YHR155W 3687 nt0.59□□□□□ -2.32
LYS1P38998 BEM3YPL115C 3387 nt0.59□□□□□ -2.32
LYS1P38998 PRP39YML046W 1890 nt0.58□□□□□ -2.32
LYS1P38998 UTP8YGR128C 2142 nt0.58□□□□□ -2.32
LYS1P38998 YJL182CYJL182C 318 nt0.57□□□□□ -2.32
LYS1P38998 YOR192C-BYOR192C-B 5313 nt0.56□□□□□ -2.32
LYS1P38998 YEL014CYEL014C 306 nt0.56□□□□□ -2.32
LYS1P38998 PET111YMR257C 2403 nt0.55□□□□□ -2.32
LYS1P38998 SPG3YDR504C 384 nt0.55□□□□□ -2.32 RIP-Chip
LYS1P38998 YMR272W-AYMR272W-A 114 nt0.55□□□□□ -2.32
LYS1P38998 snR46snR46 197 nt0.55□□□□□ -2.32 RIP-Chip
LYS1P38998 NNF2YGR089W 2811 nt0.54□□□□□ -2.32
LYS1P38998 YLR232WYLR232W 348 nt0.54□□□□□ -2.32
LYS1P38998 UTP10YJL109C 5310 nt0.54□□□□□ -2.32
LYS1P38998 TAH1YCR060W 336 nt0.53□□□□□ -2.32
LYS1P38998 YMR046W-AYMR046W-A 129 nt0.52□□□□□ -2.33
LYS1P38998 JLP2YMR132C 627 nt0.52□□□□□ -2.33
LYS1P38998 YBL039C-AYBL039C-A 84 nt0.51□□□□□ -2.33
LYS1P38998 YDR406W-AYDR406W-A 246 nt0.49□□□□□ -2.33
LYS1P38998 SBH1YER087C-B 249 nt0.49□□□□□ -2.33
LYS1P38998 YLL006W-AYLL006W-A 177 nt0.49□□□□□ -2.33
LYS1P38998 YGL182CYGL182C 324 nt0.48□□□□□ -2.33
LYS1P38998 YBR072C-AYBR072C-A 162 nt0.48□□□□□ -2.33
LYS1P38998 snR52snR52 92 nt0.48□□□□□ -2.33
LYS1P38998 NIP1YMR309C 2439 nt0.48□□□□□ -2.33
LYS1P38998 BUL2YML111W 2763 nt0.47□□□□□ -2.33
LYS1P38998 RPS26AYGL189C 360 nt0.47□□□□□ -2.33
LYS1P38998 tM(CAU)Q1tM(CAU)Q1 76 nt0.47□□□□□ -2.33 RIP-Chip
LYS1P38998 ULP2YIL031W 3105 nt0.46□□□□□ -2.34
LYS1P38998 YDR371C-AYDR371C-A 105 nt0.46□□□□□ -2.34
LYS1P38998 YDR544CYDR544C 429 nt0.46□□□□□ -2.34
LYS1P38998 FMP27YLR454W 7887 nt0.45□□□□□ -2.34
LYS1P38998 YEL073CYEL073C 324 nt0.45□□□□□ -2.34
LYS1P38998 YLR342W-AYLR342W-A 174 nt0.44□□□□□ -2.34
LYS1P38998 MLP1YKR095W 5628 nt0.44□□□□□ -2.34
LYS1P38998 ORC3YLL004W 1851 nt0.44□□□□□ -2.34
LYS1P38998 YOR381W-AYOR381W-A 168 nt0.43□□□□□ -2.34
LYS1P38998 SDH6YDR379C-A 240 nt0.42□□□□□ -2.34
LYS1P38998 AI1Q0050 2505 nt0.42□□□□□ -2.34
LYS1P38998 GLG1YKR058W 1851 nt0.41□□□□□ -2.34
LYS1P38998 COG6YNL041C 2520 nt0.41□□□□□ -2.34
LYS1P38998 YOR170WYOR170W 306 nt0.4□□□□□ -2.35
LYS1P38998 YJL150WYJL150W 303 nt0.39□□□□□ -2.35
LYS1P38998 YOR314W-AYOR314W-A 111 nt0.37□□□□□ -2.35
LYS1P38998 RPM2YML091C 3609 nt0.37□□□□□ -2.35
LYS1P38998 RCO1YMR075W 2055 nt0.36□□□□□ -2.35
LYS1P38998 IQG1YPL242C 4488 nt0.34□□□□□ -2.35
LYS1P38998 YBL100W-BYBL100W-B 5313 nt0.34□□□□□ -2.36
LYS1P38998 BIR1YJR089W 2865 nt0.31□□□□□ -2.36
LYS1P38998 CSE1YGL238W 2883 nt0.31□□□□□ -2.36
LYS1P38998 snR48snR48 113 nt0.3□□□□□ -2.36
LYS1P38998 tM(CAU)Q2tM(CAU)Q2 78 nt0.29□□□□□ -2.36
LYS1P38998 YDR210WYDR210W 228 nt0.28□□□□□ -2.36
LYS1P38998 YOR186C-AYOR186C-A 210 nt0.28□□□□□ -2.36
LYS1P38998 YOR329W-AYOR329W-A 210 nt0.28□□□□□ -2.36
LYS1P38998 YER078W-AYER078W-A 165 nt0.27□□□□□ -2.37
Retrieved 100 of 7,029 protein–RNA pairs in 9.2 ms