Protein–RNA interactions for Protein: P38961

RRP8, 25S rRNA (adenine(645)-N(1))-methyltransferase, yeastyeast

Known RBP Predictions only

Length 392 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RRP8P38961 YLR282CYLR282C 342 nt1.27□□□□□ -2.21
RRP8P38961 BFR2YDR299W 1605 nt1.26□□□□□ -2.21
RRP8P38961 SPT7YBR081C 3999 nt1.25□□□□□ -2.21
RRP8P38961 ATP8Q0080 147 nt1.25□□□□□ -2.21
RRP8P38961 PRP42YDR235W 1635 nt1.25□□□□□ -2.21
RRP8P38961 STF2YGR008C 255 nt1.24□□□□□ -2.21
RRP8P38961 COX5BYIL111W 456 nt1.24□□□□□ -2.21
RRP8P38961 HUG1YML058W-A 207 nt1.24□□□□□ -2.21
RRP8P38961 PRP5YBR237W 2550 nt1.22□□□□□ -2.21
RRP8P38961 RPL26BYGR034W 384 nt1.22□□□□□ -2.21
RRP8P38961 snR190snR190 190 nt1.22□□□□□ -2.21
RRP8P38961 YLR041WYLR041W 321 nt1.21□□□□□ -2.22
RRP8P38961 KAP120YPL125W 3099 nt1.21□□□□□ -2.22
RRP8P38961 FYV10YIL097W 1551 nt1.18□□□□□ -2.22
RRP8P38961 tL(UAA)QtL(UAA)Q 85 nt1.18□□□□□ -2.22
RRP8P38961 YGL182CYGL182C 324 nt1.18□□□□□ -2.22
RRP8P38961 YBL039C-AYBL039C-A 84 nt1.18□□□□□ -2.22
RRP8P38961 YNL170WYNL170W 396 nt1.18□□□□□ -2.22
RRP8P38961 YOR170WYOR170W 306 nt1.17□□□□□ -2.22
RRP8P38961 YML002WYML002W 2214 nt1.17□□□□□ -2.22
RRP8P38961 YJR029WYJR029W 5268 nt1.16□□□□□ -2.22
RRP8P38961 YPR137C-BYPR137C-B 5268 nt1.16□□□□□ -2.22
RRP8P38961 YGR164WYGR164W 336 nt1.16□□□□□ -2.22
RRP8P38961 YKL100W-AYKL100W-A 90 nt1.16□□□□□ -2.22
RRP8P38961 SDH6YDR379C-A 240 nt1.15□□□□□ -2.23
RRP8P38961 YOR102WYOR102W 351 nt1.15□□□□□ -2.23
RRP8P38961 RKR1YMR247C 4689 nt1.15□□□□□ -2.23
RRP8P38961 TAH1YCR060W 336 nt1.14□□□□□ -2.23
RRP8P38961 tN(GUU)QtN(GUU)Q 71 nt1.14□□□□□ -2.23
RRP8P38961 YHL015W-AYHL015W-A 84 nt1.14□□□□□ -2.23
RRP8P38961 snR48snR48 113 nt1.14□□□□□ -2.23
RRP8P38961 UTP8YGR128C 2142 nt1.12□□□□□ -2.23
RRP8P38961 PRP16YKR086W 3216 nt1.1□□□□□ -2.23
RRP8P38961 YPR160W-AYPR160W-A 81 nt1.09□□□□□ -2.23
RRP8P38961 VAM6YDL077C 3150 nt1.09□□□□□ -2.24
RRP8P38961 YDR544CYDR544C 429 nt1.08□□□□□ -2.24
RRP8P38961 EMT1tM(CAU)D 73 nt1.08□□□□□ -2.24
RRP8P38961 EMT5tM(CAU)J1 73 nt1.08□□□□□ -2.24
RRP8P38961 EMT3tM(CAU)J2 73 nt1.08□□□□□ -2.24
RRP8P38961 EMT4tM(CAU)M 73 nt1.08□□□□□ -2.24
RRP8P38961 EMT2tM(CAU)O2 73 nt1.08□□□□□ -2.24
RRP8P38961 YOR329W-AYOR329W-A 210 nt1.08□□□□□ -2.24
RRP8P38961 snR39BsnR39B 96 nt1.08□□□□□ -2.24
RRP8P38961 SCC2YDR180W 4482 nt1.08□□□□□ -2.24
RRP8P38961 SEC8YPR055W 3198 nt1.08□□□□□ -2.24
RRP8P38961 YDL073WYDL073W 2955 nt1.08□□□□□ -2.24
RRP8P38961 CHS6YJL099W 2241 nt1.07□□□□□ -2.24
RRP8P38961 YPR117WYPR117W 7470 nt1.05□□□□□ -2.24
RRP8P38961 YOR314W-AYOR314W-A 111 nt1.05□□□□□ -2.24
RRP8P38961 YHR131W-AYHR131W-A 246 nt1.04□□□□□ -2.24
RRP8P38961 YLR232WYLR232W 348 nt1.03□□□□□ -2.24
RRP8P38961 SNU13YEL026W 381 nt1.02□□□□□ -2.25
RRP8P38961 YLR399W-AYLR399W-A 105 nt1.02□□□□□ -2.25
RRP8P38961 PAU24YBR301W 363 nt1.02□□□□□ -2.25
RRP8P38961 YIL071W-AYIL071W-A 477 nt0.99□□□□□ -2.25
RRP8P38961 SEC1YDR164C 2175 nt0.98□□□□□ -2.25
RRP8P38961 BEM2YER155C 6504 nt0.98□□□□□ -2.25
RRP8P38961 COG6YNL041C 2520 nt0.98□□□□□ -2.25
RRP8P38961 QCR9YGR183C 201 nt0.98□□□□□ -2.25
RRP8P38961 YCL001W-BYCL001W-B 255 nt0.98□□□□□ -2.25
RRP8P38961 UBP3YER151C 2739 nt0.98□□□□□ -2.25
RRP8P38961 OST4YDL232W 111 nt0.97□□□□□ -2.25
RRP8P38961 YDR210WYDR210W 228 nt0.95□□□□□ -2.26
RRP8P38961 BEM3YPL115C 3387 nt0.94□□□□□ -2.26
RRP8P38961 YNL067W-BYNL067W-B 141 nt0.94□□□□□ -2.26
RRP8P38961 YIL142C-AYIL142C-A 333 nt0.93□□□□□ -2.26
RRP8P38961 DOP1YDR141C 5097 nt0.9□□□□□ -2.26
RRP8P38961 YOR192C-BYOR192C-B 5313 nt0.9□□□□□ -2.27
RRP8P38961 tM(CAU)Q2tM(CAU)Q2 78 nt0.89□□□□□ -2.27
RRP8P38961 YSP1YHR155W 3687 nt0.87□□□□□ -2.27
RRP8P38961 YBR072C-AYBR072C-A 162 nt0.86□□□□□ -2.27
RRP8P38961 LTE1YAL024C 4308 nt0.86□□□□□ -2.27
RRP8P38961 YJL127W-AYJL127W-A 117 nt0.85□□□□□ -2.27
RRP8P38961 YPR159C-AYPR159C-A 102 nt0.84□□□□□ -2.27
RRP8P38961 NNF2YGR089W 2811 nt0.83□□□□□ -2.28
RRP8P38961 tF(GAA)BtF(GAA)B 73 nt0.83□□□□□ -2.28
RRP8P38961 tF(GAA)FtF(GAA)F 73 nt0.83□□□□□ -2.28
RRP8P38961 tF(GAA)GtF(GAA)G 73 nt0.83□□□□□ -2.28
RRP8P38961 tF(GAA)H1tF(GAA)H1 73 nt0.83□□□□□ -2.28
RRP8P38961 tF(GAA)H2tF(GAA)H2 73 nt0.83□□□□□ -2.28
RRP8P38961 tF(GAA)MtF(GAA)M 73 nt0.83□□□□□ -2.28
RRP8P38961 tF(GAA)P1tF(GAA)P1 73 nt0.83□□□□□ -2.28
RRP8P38961 tF(GAA)P2tF(GAA)P2 73 nt0.83□□□□□ -2.28
RRP8P38961 Q0143Q0143 153 nt0.83□□□□□ -2.28
RRP8P38961 BUL2YML111W 2763 nt0.82□□□□□ -2.28
RRP8P38961 YCR095W-AYCR095W-A 159 nt0.81□□□□□ -2.28
RRP8P38961 SOM1YEL059C-A 225 nt0.81□□□□□ -2.28
RRP8P38961 YMR160WYMR160W 2451 nt0.8□□□□□ -2.28
RRP8P38961 tT(AGU)BtT(AGU)B 73 nt0.8□□□□□ -2.28
RRP8P38961 tT(AGU)CtT(AGU)C 73 nt0.8□□□□□ -2.28
RRP8P38961 tT(AGU)DtT(AGU)D 73 nt0.8□□□□□ -2.28
RRP8P38961 tT(AGU)HtT(AGU)H 73 nt0.8□□□□□ -2.28
RRP8P38961 tT(AGU)I1tT(AGU)I1 73 nt0.8□□□□□ -2.28
RRP8P38961 tT(AGU)I2tT(AGU)I2 73 nt0.8□□□□□ -2.28
RRP8P38961 tT(AGU)JtT(AGU)J 73 nt0.8□□□□□ -2.28
RRP8P38961 tT(AGU)N1tT(AGU)N1 73 nt0.8□□□□□ -2.28
RRP8P38961 tT(AGU)N2tT(AGU)N2 73 nt0.8□□□□□ -2.28
RRP8P38961 tT(AGU)O1tT(AGU)O1 73 nt0.8□□□□□ -2.28
RRP8P38961 tT(AGU)O2tT(AGU)O2 73 nt0.8□□□□□ -2.28
RRP8P38961 YLL006W-AYLL006W-A 177 nt0.8□□□□□ -2.28
Retrieved 100 of 7,029 protein–RNA pairs in 38.8 ms