Protein–RNA interactions for Protein: P36094

SPC42, Spindle pole body component SPC42, yeastyeast

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SPC42P36094 YLL066W-BYLL066W-B 171 nt1.72□□□□□ -2.13
SPC42P36094 SPC110YDR356W 2835 nt1.72□□□□□ -2.13
SPC42P36094 APL3YBL037W 3078 nt1.72□□□□□ -2.13
SPC42P36094 YOR093CYOR093C 4947 nt1.72□□□□□ -2.13
SPC42P36094 PMD1YER132C 5262 nt1.71□□□□□ -2.14
SPC42P36094 ANS1YHR126C 480 nt1.71□□□□□ -2.14
SPC42P36094 YMR272W-BYMR272W-B 108 nt1.71□□□□□ -2.14
SPC42P36094 YOR161W-AYOR161W-A 81 nt1.71□□□□□ -2.14
SPC42P36094 SET3YKR029C 2256 nt1.71□□□□□ -2.14
SPC42P36094 RSM22YKL155C 1887 nt1.7□□□□□ -2.14
SPC42P36094 YBR200W-AYBR200W-A 165 nt1.7□□□□□ -2.14
SPC42P36094 snR45snR45 172 nt1.7□□□□□ -2.14
SPC42P36094 STO1YMR125W 2586 nt1.69□□□□□ -2.14
SPC42P36094 TAH1YCR060W 336 nt1.69□□□□□ -2.14
SPC42P36094 NUP157YER105C 4176 nt1.69□□□□□ -2.14
SPC42P36094 YAR009CYAR009C 3591 nt1.68□□□□□ -2.14
SPC42P36094 NUP188YML103C 4968 nt1.67□□□□□ -2.14
SPC42P36094 COX5BYIL111W 456 nt1.67□□□□□ -2.14
SPC42P36094 COA6YMR244C-A 315 nt1.67□□□□□ -2.14
SPC42P36094 COG6YNL041C 2520 nt1.67□□□□□ -2.14
SPC42P36094 snR81snR81 201 nt1.66□□□□□ -2.14
SPC42P36094 YKL100W-AYKL100W-A 90 nt1.66□□□□□ -2.14
SPC42P36094 SMC1YFL008W 3678 nt1.65□□□□□ -2.14
SPC42P36094 PIK1YNL267W 3201 nt1.64□□□□□ -2.15
SPC42P36094 tM(CAU)Q2tM(CAU)Q2 78 nt1.63□□□□□ -2.15
SPC42P36094 WAR1YML076C 2835 nt1.63□□□□□ -2.15
SPC42P36094 KAP120YPL125W 3099 nt1.6□□□□□ -2.15
SPC42P36094 YML002WYML002W 2214 nt1.59□□□□□ -2.15
SPC42P36094 YDR210WYDR210W 228 nt1.59□□□□□ -2.15
SPC42P36094 YAL037C-AYAL037C-A 93 nt1.58□□□□□ -2.16
SPC42P36094 YLR041WYLR041W 321 nt1.57□□□□□ -2.16
SPC42P36094 RAD9YDR217C 3930 nt1.57□□□□□ -2.16
SPC42P36094 DNF3YMR162C 4971 nt1.57□□□□□ -2.16
SPC42P36094 BIR1YJR089W 2865 nt1.56□□□□□ -2.16
SPC42P36094 CDC39YCR093W 6327 nt1.55□□□□□ -2.16
SPC42P36094 YJL127W-AYJL127W-A 117 nt1.55□□□□□ -2.16
SPC42P36094 YBR072C-AYBR072C-A 162 nt1.55□□□□□ -2.16
SPC42P36094 HKR1YDR420W 5409 nt1.55□□□□□ -2.16
SPC42P36094 CCH1YGR217W 6120 nt1.54□□□□□ -2.16
SPC42P36094 snR62snR62 100 nt1.54□□□□□ -2.16
SPC42P36094 YLR232WYLR232W 348 nt1.54□□□□□ -2.16
SPC42P36094 YNL266WYNL266W 420 nt1.54□□□□□ -2.16
SPC42P36094 FYV10YIL097W 1551 nt1.54□□□□□ -2.16
SPC42P36094 SEC1YDR164C 2175 nt1.52□□□□□ -2.17
SPC42P36094 NOP9YJL010C 2001 nt1.52□□□□□ -2.17
SPC42P36094 FIG2YCR089W 4830 nt1.52□□□□□ -2.17
SPC42P36094 FYV8YGR196C 2454 nt1.51□□□□□ -2.17
SPC42P36094 PET127YOR017W 2403 nt1.51□□□□□ -2.17
SPC42P36094 tQ(UUG)E2tQ(UUG)E2 72 nt1.5□□□□□ -2.17
SPC42P36094 snR190snR190 190 nt1.5□□□□□ -2.17
SPC42P36094 YGR146C-AYGR146C-A 162 nt1.49□□□□□ -2.17
SPC42P36094 ASE1YOR058C 2658 nt1.49□□□□□ -2.17
SPC42P36094 YOL083C-AYOL083C-A 141 nt1.48□□□□□ -2.17
SPC42P36094 NST1YNL091W 3723 nt1.47□□□□□ -2.17
SPC42P36094 NUP192YJL039C 5052 nt1.46□□□□□ -2.18
SPC42P36094 RPL26BYGR034W 384 nt1.45□□□□□ -2.18
SPC42P36094 YBL071C-BYBL071C-B 99 nt1.45□□□□□ -2.18
SPC42P36094 YDL073WYDL073W 2955 nt1.44□□□□□ -2.18
SPC42P36094 LAA1YJL207C 6045 nt1.43□□□□□ -2.18
SPC42P36094 RPM2YML091C 3609 nt1.43□□□□□ -2.18
SPC42P36094 GEA2YEL022W 4380 nt1.42□□□□□ -2.18
SPC42P36094 CAT8YMR280C 4302 nt1.41□□□□□ -2.18
SPC42P36094 RPS26AYGL189C 360 nt1.39□□□□□ -2.19
SPC42P36094 YDR034C-AYDR034C-A 177 nt1.38□□□□□ -2.19
SPC42P36094 YBR196C-AYBR196C-A 150 nt1.38□□□□□ -2.19
SPC42P36094 NNF2YGR089W 2811 nt1.34□□□□□ -2.19
SPC42P36094 SCC2YDR180W 4482 nt1.34□□□□□ -2.19
SPC42P36094 YOL164W-AYOL164W-A 183 nt1.34□□□□□ -2.19
SPC42P36094 PRP16YKR086W 3216 nt1.34□□□□□ -2.2
SPC42P36094 MSH3YCR092C 3057 nt1.34□□□□□ -2.2
SPC42P36094 YNL284C-BYNL284C-B 5268 nt1.33□□□□□ -2.2
SPC42P36094 SEC8YPR055W 3198 nt1.33□□□□□ -2.2
SPC42P36094 SEC10YLR166C 2616 nt1.32□□□□□ -2.2
SPC42P36094 tN(GUU)QtN(GUU)Q 71 nt1.32□□□□□ -2.2
SPC42P36094 YGR240C-AYGR240C-A 201 nt1.32□□□□□ -2.2
SPC42P36094 YBL100W-CYBL100W-C 120 nt1.32□□□□□ -2.2
SPC42P36094 UBP3YER151C 2739 nt1.3□□□□□ -2.2
SPC42P36094 BEM3YPL115C 3387 nt1.29□□□□□ -2.2
SPC42P36094 YLR399W-AYLR399W-A 105 nt1.28□□□□□ -2.2
SPC42P36094 YPR160W-AYPR160W-A 81 nt1.28□□□□□ -2.2
SPC42P36094 YLR286W-AYLR286W-A 135 nt1.27□□□□□ -2.21
SPC42P36094 BUD3YCL014W 4911 nt1.27□□□□□ -2.21
SPC42P36094 YGR130CYGR130C 2451 nt1.25□□□□□ -2.21
SPC42P36094 LTE1YAL024C 4308 nt1.25□□□□□ -2.21
SPC42P36094 YPR117WYPR117W 7470 nt1.25□□□□□ -2.21
SPC42P36094 YSP1YHR155W 3687 nt1.25□□□□□ -2.21
SPC42P36094 ORC3YLL004W 1851 nt1.24□□□□□ -2.21
SPC42P36094 SPT7YBR081C 3999 nt1.24□□□□□ -2.21
SPC42P36094 tH(GUG)E1tH(GUG)E1 72 nt1.24□□□□□ -2.21
SPC42P36094 tH(GUG)E2tH(GUG)E2 72 nt1.24□□□□□ -2.21
SPC42P36094 tH(GUG)G1tH(GUG)G1 72 nt1.24□□□□□ -2.21
SPC42P36094 tH(GUG)G2tH(GUG)G2 72 nt1.24□□□□□ -2.21
SPC42P36094 tH(GUG)HtH(GUG)H 72 nt1.24□□□□□ -2.21
SPC42P36094 tH(GUG)KtH(GUG)K 72 nt1.24□□□□□ -2.21
SPC42P36094 tH(GUG)MtH(GUG)M 72 nt1.24□□□□□ -2.21
SPC42P36094 snR47snR47 99 nt1.24□□□□□ -2.21
SPC42P36094 GLG1YKR058W 1851 nt1.24□□□□□ -2.21
SPC42P36094 ULP2YIL031W 3105 nt1.22□□□□□ -2.21
SPC42P36094 YJR029WYJR029W 5268 nt1.21□□□□□ -2.22
SPC42P36094 YPR137C-BYPR137C-B 5268 nt1.21□□□□□ -2.22
Retrieved 100 of 7,029 protein–RNA pairs in 14.5 ms