Protein–RNA interactions for Protein: P25655

CDC39, General negative regulator of transcription subunit 1, yeastyeast

Known RBP Predictions only

Length 2,108 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CDC39P25655 YIL002W-AYIL002W-A 210 nt-0.6□□□□□ -2.51
CDC39P25655 ESP1YGR098C 4893 nt-0.6□□□□□ -2.51
CDC39P25655 YNR025CYNR025C 360 nt-0.61□□□□□ -2.51
CDC39P25655 YJL197C-AYJL197C-A 282 nt-0.61□□□□□ -2.51
CDC39P25655 AGA2YGL032C 264 nt-0.62□□□□□ -2.51
CDC39P25655 YMR158W-BYMR158W-B 321 nt-0.62□□□□□ -2.51
CDC39P25655 YPR016W-AYPR016W-A 261 nt-0.63□□□□□ -2.51
CDC39P25655 YOR161W-AYOR161W-A 81 nt-0.64□□□□□ -2.51
CDC39P25655 YGR069WYGR069W 336 nt-0.64□□□□□ -2.51
CDC39P25655 YLL019W-AYLL019W-A 93 nt-0.64□□□□□ -2.51
CDC39P25655 YPR010C-AYPR010C-A 219 nt-0.64□□□□□ -2.51
CDC39P25655 PRM3YPL192C 402 nt-0.65□□□□□ -2.51
CDC39P25655 YLR406C-AYLR406C-A 150 nt-0.65□□□□□ -2.51
CDC39P25655 YMR001C-AYMR001C-A 231 nt-0.65□□□□□ -2.51
CDC39P25655 snR36snR36 182 nt-0.66□□□□□ -2.52
CDC39P25655 YDR366CYDR366C 399 nt-0.67□□□□□ -2.52
CDC39P25655 PAU9YBL108C-A 129 nt-0.67□□□□□ -2.52
CDC39P25655 VPS20YMR077C 666 nt-0.68□□□□□ -2.52
CDC39P25655 YBR223W-AYBR223W-A 120 nt-0.68□□□□□ -2.52
CDC39P25655 YGL149WYGL149W 306 nt-0.69□□□□□ -2.52
CDC39P25655 YCR038W-AYCR038W-A 126 nt-0.7□□□□□ -2.52
CDC39P25655 YFL063WYFL063W 456 nt-0.7□□□□□ -2.52
CDC39P25655 YLR434CYLR434C 384 nt-0.7□□□□□ -2.52
CDC39P25655 CSN9YDR179C 489 nt-0.74□□□□□ -2.53
CDC39P25655 YDL007C-AYDL007C-A 258 nt-0.74□□□□□ -2.53
CDC39P25655 YER079WYER079W 633 nt-0.75□□□□□ -2.53
CDC39P25655 YLR264C-AYLR264C-A 117 nt-0.75□□□□□ -2.53
CDC39P25655 YOR072W-BYOR072W-B 162 nt-0.75□□□□□ -2.53
CDC39P25655 YDR544CYDR544C 429 nt-0.76□□□□□ -2.53
CDC39P25655 YML100W-AYML100W-A 174 nt-0.76□□□□□ -2.53
CDC39P25655 YOL013W-BYOL013W-B 291 nt-0.77□□□□□ -2.53
CDC39P25655 APQ12YIL040W 417 nt-0.78□□□□□ -2.53
CDC39P25655 YPL060C-AYPL060C-A 3315 nt-0.78□□□□□ -2.54
CDC39P25655 snR60snR60 104 nt-0.8□□□□□ -2.54
CDC39P25655 YER137W-AYER137W-A 306 nt-0.8□□□□□ -2.54
CDC39P25655 MYO1YHR023W 5787 nt-0.81□□□□□ -2.54
CDC39P25655 YER053C-AYER053C-A 114 nt-0.83□□□□□ -2.54
CDC39P25655 YMR193C-AYMR193C-A 387 nt-0.85□□□□□ -2.55
CDC39P25655 YBR285WYBR285W 435 nt-0.85□□□□□ -2.55
CDC39P25655 COG6YNL041C 2520 nt-0.87□□□□□ -2.55
CDC39P25655 RPM2YML091C 3609 nt-0.87□□□□□ -2.55
CDC39P25655 tW(UCA)QtW(UCA)Q 74 nt-0.88□□□□□ -2.55
CDC39P25655 YLR202CYLR202C 327 nt-0.88□□□□□ -2.55
CDC39P25655 YDL158CYDL158C 309 nt-0.89□□□□□ -2.55
CDC39P25655 YOR121CYOR121C 306 nt-0.91□□□□□ -2.55
CDC39P25655 YDR048CYDR048C 315 nt-0.91□□□□□ -2.56
CDC39P25655 YGR035CYGR035C 351 nt-0.91□□□□□ -2.56
CDC39P25655 YJL182CYJL182C 318 nt-0.91□□□□□ -2.56
CDC39P25655 ATP6Q0085 780 nt-0.94□□□□□ -2.56
CDC39P25655 YAL068W-AYAL068W-A 255 nt-0.94□□□□□ -2.56
CDC39P25655 HTL1YCR020W-B 237 nt-0.94□□□□□ -2.56
CDC39P25655 YEL050W-AYEL050W-A 192 nt-0.94□□□□□ -2.56
CDC39P25655 YGL182CYGL182C 324 nt-0.94□□□□□ -2.56
CDC39P25655 YAF9YNL107W 681 nt-0.95□□□□□ -2.56
CDC39P25655 BIL1YOR304C-A 231 nt-0.95□□□□□ -2.56
CDC39P25655 YHL009W-BYHL009W-B 5409 nt-0.95□□□□□ -2.56
CDC39P25655 snR49snR49 165 nt-0.95□□□□□ -2.56
CDC39P25655 YOR015WYOR015W 360 nt-0.97□□□□□ -2.56
CDC39P25655 YOR314W-AYOR314W-A 111 nt-0.97□□□□□ -2.56
CDC39P25655 YAL016C-BYAL016C-B 186 nt-0.97□□□□□ -2.57
CDC39P25655 YNL028WYNL028W 318 nt-0.98□□□□□ -2.57
CDC39P25655 HMRA1YCR097W 381 nt-0.98□□□□□ -2.57
CDC39P25655 YAL063C-AYAL063C-A 291 nt-1□□□□□ -2.57
CDC39P25655 YBL039C-AYBL039C-A 84 nt-1□□□□□ -2.57
CDC39P25655 ATP19YOL077W-A 207 nt-1.02□□□□□ -2.57
CDC39P25655 YJR157WYJR157W 363 nt-1.03□□□□□ -2.57
CDC39P25655 YBR182C-AYBR182C-A 195 nt-1.03□□□□□ -2.57
CDC39P25655 YIL032CYIL032C 357 nt-1.04□□□□□ -2.58
CDC39P25655 YJL077W-AYJL077W-A 87 nt-1.04□□□□□ -2.58
CDC39P25655 YNL324WYNL324W 396 nt-1.06□□□□□ -2.58
CDC39P25655 snR161snR161 161 nt-1.06□□□□□ -2.58
CDC39P25655 YGL052WYGL052W 306 nt-1.06□□□□□ -2.58
CDC39P25655 YNL266WYNL266W 420 nt-1.06□□□□□ -2.58
CDC39P25655 YFL032WYFL032W 321 nt-1.07□□□□□ -2.58
CDC39P25655 YLR154W-FYLR154W-F 141 nt-1.07□□□□□ -2.58
CDC39P25655 snR74snR74 88 nt-1.08□□□□□ -2.58
CDC39P25655 YLR120W-AYLR120W-A 102 nt-1.08□□□□□ -2.58
CDC39P25655 YDR102CYDR102C 333 nt-1.1□□□□□ -2.59
CDC39P25655 YER090C-AYER090C-A 90 nt-1.1□□□□□ -2.59
CDC39P25655 YER097WYER097W 330 nt-1.1□□□□□ -2.59
CDC39P25655 JLP2YMR132C 627 nt-1.12□□□□□ -2.59
CDC39P25655 YDR183C-AYDR183C-A 258 nt-1.13□□□□□ -2.59
CDC39P25655 RDS3YPR094W 324 nt-1.14□□□□□ -2.59
CDC39P25655 YPR197CYPR197C 564 nt-1.15□□□□□ -2.59
CDC39P25655 YER181CYER181C 324 nt-1.15□□□□□ -2.59
CDC39P25655 YOR170WYOR170W 306 nt-1.15□□□□□ -2.59
CDC39P25655 YGR146C-AYGR146C-A 162 nt-1.16□□□□□ -2.59
CDC39P25655 YOR329W-AYOR329W-A 210 nt-1.16□□□□□ -2.59
CDC39P25655 tQ(UUG)QtQ(UUG)Q 76 nt-1.16□□□□□ -2.6
CDC39P25655 YFL019CYFL019C 354 nt-1.18□□□□□ -2.6
CDC39P25655 tP(UGG)QtP(UGG)Q 72 nt-1.18□□□□□ -2.6
CDC39P25655 YOR293C-AYOR293C-A 150 nt-1.2□□□□□ -2.6
CDC39P25655 YDR413CYDR413C 576 nt-1.22□□□□□ -2.6
CDC39P25655 YDR157WYDR157W 402 nt-1.23□□□□□ -2.61
CDC39P25655 YML099W-AYML099W-A 330 nt-1.24□□□□□ -2.61
CDC39P25655 YPL038W-AYPL038W-A 192 nt-1.24□□□□□ -2.61
CDC39P25655 YOR008C-AYOR008C-A 225 nt-1.24□□□□□ -2.61
CDC39P25655 snR69snR69 101 nt-1.25□□□□□ -2.61
CDC39P25655 YMR172C-AYMR172C-A 384 nt-1.25□□□□□ -2.61
CDC39P25655 YEL014CYEL014C 306 nt-1.26□□□□□ -2.61
Retrieved 100 of 7,029 protein–RNA pairs in 13 ms