Protein–RNA interactions for Protein: P02406

RPL28, 60S ribosomal protein L28, yeastyeast

Known RBP Predictions only

Length 149 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPL28P02406 CSE1YGL238W 2883 nt-0.39□□□□□ -2.47
RPL28P02406 SEC10YLR166C 2616 nt-0.4□□□□□ -2.47
RPL28P02406 YBR099CYBR099C 384 nt-0.41□□□□□ -2.48
RPL28P02406 snR46snR46 197 nt-0.41□□□□□ -2.48
RPL28P02406 YMR158W-BYMR158W-B 321 nt-0.42□□□□□ -2.48
RPL28P02406 YMR001C-AYMR001C-A 231 nt-0.43□□□□□ -2.48
RPL28P02406 RAD61YDR014W 1944 nt-0.43□□□□□ -2.48
RPL28P02406 YDR048CYDR048C 315 nt-0.44□□□□□ -2.48
RPL28P02406 YJL197C-AYJL197C-A 282 nt-0.44□□□□□ -2.48
RPL28P02406 SBH2YER019C-A 267 nt-0.45□□□□□ -2.48
RPL28P02406 AGA2YGL032C 264 nt-0.45□□□□□ -2.48
RPL28P02406 YGR069WYGR069W 336 nt-0.45□□□□□ -2.48
RPL28P02406 tW(UCA)QtW(UCA)Q 74 nt-0.45□□□□□ -2.48
RPL28P02406 YIR030W-AYIR030W-A 384 nt-0.46□□□□□ -2.48
RPL28P02406 YNL324WYNL324W 396 nt-0.46□□□□□ -2.48
RPL28P02406 GLG1YKR058W 1851 nt-0.47□□□□□ -2.48
RPL28P02406 YPR170W-AYPR170W-A 186 nt-0.47□□□□□ -2.48
RPL28P02406 YMR193C-AYMR193C-A 387 nt-0.49□□□□□ -2.49
RPL28P02406 BIL1YOR304C-A 231 nt-0.49□□□□□ -2.49
RPL28P02406 YLL019W-AYLL019W-A 93 nt-0.5□□□□□ -2.49
RPL28P02406 RPM2YML091C 3609 nt-0.5□□□□□ -2.49
RPL28P02406 YPR016W-AYPR016W-A 261 nt-0.51□□□□□ -2.49
RPL28P02406 EST1YLR233C 2100 nt-0.53□□□□□ -2.49
RPL28P02406 YER053C-AYER053C-A 114 nt-0.53□□□□□ -2.49
RPL28P02406 YPL060C-AYPL060C-A 3315 nt-0.54□□□□□ -2.5
RPL28P02406 YAL063C-AYAL063C-A 291 nt-0.55□□□□□ -2.5
RPL28P02406 YAL068W-AYAL068W-A 255 nt-0.55□□□□□ -2.5
RPL28P02406 UTP8YGR128C 2142 nt-0.56□□□□□ -2.5
RPL28P02406 SDH6YDR379C-A 240 nt-0.57□□□□□ -2.5
RPL28P02406 YGR035CYGR035C 351 nt-0.57□□□□□ -2.5
RPL28P02406 YJL113WYJL113W 4647 nt-0.58□□□□□ -2.5
RPL28P02406 snR60snR60 104 nt-0.58□□□□□ -2.5
RPL28P02406 YLR264C-AYLR264C-A 117 nt-0.58□□□□□ -2.5
RPL28P02406 HTL1YCR020W-B 237 nt-0.59□□□□□ -2.5
RPL28P02406 YOR072W-BYOR072W-B 162 nt-0.6□□□□□ -2.51
RPL28P02406 YIL002W-AYIL002W-A 210 nt-0.61□□□□□ -2.51
RPL28P02406 HMRA1YCR097W 381 nt-0.62□□□□□ -2.51
RPL28P02406 YIL032CYIL032C 357 nt-0.64□□□□□ -2.51
RPL28P02406 APQ12YIL040W 417 nt-0.65□□□□□ -2.51
RPL28P02406 YJR157WYJR157W 363 nt-0.65□□□□□ -2.51
RPL28P02406 YNL028WYNL028W 318 nt-0.67□□□□□ -2.52
RPL28P02406 YOR293C-AYOR293C-A 150 nt-0.67□□□□□ -2.52
RPL28P02406 Q0017Q0017 162 nt-0.67□□□□□ -2.52
RPL28P02406 YHL009W-BYHL009W-B 5409 nt-0.67□□□□□ -2.52
RPL28P02406 tT(UGU)G1tT(UGU)G1 72 nt-0.7□□□□□ -2.52
RPL28P02406 tT(UGU)G2tT(UGU)G2 72 nt-0.7□□□□□ -2.52
RPL28P02406 tT(UGU)PtT(UGU)P 72 nt-0.7□□□□□ -2.52
RPL28P02406 YCR038W-AYCR038W-A 126 nt-0.73□□□□□ -2.53
RPL28P02406 YNL067W-BYNL067W-B 141 nt-0.73□□□□□ -2.53
RPL28P02406 YOR015WYOR015W 360 nt-0.73□□□□□ -2.53
RPL28P02406 COG6YNL041C 2520 nt-0.74□□□□□ -2.53
RPL28P02406 YLR154W-FYLR154W-F 141 nt-0.74□□□□□ -2.53
RPL28P02406 YLR120W-AYLR120W-A 102 nt-0.75□□□□□ -2.53
RPL28P02406 TAH1YCR060W 336 nt-0.76□□□□□ -2.53
RPL28P02406 YDR102CYDR102C 333 nt-0.77□□□□□ -2.53
RPL28P02406 YGL149WYGL149W 306 nt-0.77□□□□□ -2.53
RPL28P02406 snR33snR33 183 nt-0.77□□□□□ -2.53
RPL28P02406 snR36snR36 182 nt-0.77□□□□□ -2.53
RPL28P02406 YDR183C-AYDR183C-A 258 nt-0.78□□□□□ -2.53
RPL28P02406 YDL007C-AYDL007C-A 258 nt-0.79□□□□□ -2.54
RPL28P02406 YDR544CYDR544C 429 nt-0.8□□□□□ -2.54
RPL28P02406 YIL071W-AYIL071W-A 477 nt-0.8□□□□□ -2.54
RPL28P02406 YML100W-AYML100W-A 174 nt-0.81□□□□□ -2.54
RPL28P02406 snR74snR74 88 nt-0.82□□□□□ -2.54
RPL28P02406 YAF9YNL107W 681 nt-0.83□□□□□ -2.54
RPL28P02406 ATP6Q0085 780 nt-0.84□□□□□ -2.54
RPL28P02406 YOR314W-AYOR314W-A 111 nt-0.85□□□□□ -2.55
RPL28P02406 tA(UGC)QtA(UGC)Q 76 nt-0.86□□□□□ -2.55
RPL28P02406 YBL039C-AYBL039C-A 84 nt-0.86□□□□□ -2.55
RPL28P02406 YMR172C-AYMR172C-A 384 nt-0.87□□□□□ -2.55
RPL28P02406 snR161snR161 161 nt-0.89□□□□□ -2.55
RPL28P02406 YJL077W-AYJL077W-A 87 nt-0.9□□□□□ -2.55
RPL28P02406 YDR157WYDR157W 402 nt-0.91□□□□□ -2.56
RPL28P02406 YGL052WYGL052W 306 nt-0.91□□□□□ -2.56
RPL28P02406 YLR222C-AYLR222C-A 231 nt-0.91□□□□□ -2.56
RPL28P02406 YML099W-AYML099W-A 330 nt-0.91□□□□□ -2.56
RPL28P02406 YBR223W-AYBR223W-A 120 nt-0.91□□□□□ -2.56
RPL28P02406 YPL038W-AYPL038W-A 192 nt-0.95□□□□□ -2.56
RPL28P02406 YPR197CYPR197C 564 nt-0.97□□□□□ -2.56
RPL28P02406 YGL182CYGL182C 324 nt-0.99□□□□□ -2.57
RPL28P02406 PAU9YBL108C-A 129 nt-1.02□□□□□ -2.57
RPL28P02406 YOR008C-AYOR008C-A 225 nt-1.02□□□□□ -2.57
RPL28P02406 YFL032WYFL032W 321 nt-1.03□□□□□ -2.57
RPL28P02406 YDR118W-AYDR118W-A 117 nt-1.05□□□□□ -2.58
RPL28P02406 RPL39YJL189W 156 nt-1.06□□□□□ -2.58
RPL28P02406 YBR182C-AYBR182C-A 195 nt-1.07□□□□□ -2.58
RPL28P02406 YGL041CYGL041C 204 nt-1.08□□□□□ -2.58
RPL28P02406 YJL182CYJL182C 318 nt-1.08□□□□□ -2.58
RPL28P02406 tQ(UUG)QtQ(UUG)Q 76 nt-1.1□□□□□ -2.59
RPL28P02406 snR69snR69 101 nt-1.11□□□□□ -2.59
RPL28P02406 YPR010C-AYPR010C-A 219 nt-1.11□□□□□ -2.59
RPL28P02406 YDL240C-AYDL240C-A 138 nt-1.12□□□□□ -2.59
RPL28P02406 VAR1Q0140 1197 nt-1.13□□□□□ -2.59
RPL28P02406 YNR077CYNR077C 255 nt-1.13□□□□□ -2.59
RPL28P02406 YDR413CYDR413C 576 nt-1.14□□□□□ -2.59
RPL28P02406 tF(GAA)QtF(GAA)Q 75 nt-1.15□□□□□ -2.59
RPL28P02406 YER090C-AYER090C-A 90 nt-1.16□□□□□ -2.6
RPL28P02406 YOR170WYOR170W 306 nt-1.16□□□□□ -2.6
RPL28P02406 YER097WYER097W 330 nt-1.17□□□□□ -2.6
RPL28P02406 YOR381W-AYOR381W-A 168 nt-1.17□□□□□ -2.6
Retrieved 100 of 7,029 protein–RNA pairs in 37.9 ms