Protein–RNA interactions for Protein: A0A0B4J262

TRAV8-6, T-cell receptor alpha variable 8-6 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-6A0A0B4J262 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
TRAV8-6A0A0B4J262 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRAV8-6A0A0B4J262 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRAV8-6A0A0B4J262 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC14.68□□□□□ -0.06
TRAV8-6A0A0B4J262 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC14.68□□□□□ -0.06
TRAV8-6A0A0B4J262 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
TRAV8-6A0A0B4J262 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRAV8-6A0A0B4J262 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
TRAV8-6A0A0B4J262 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
TRAV8-6A0A0B4J262 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC14.68□□□□□ -0.06
TRAV8-6A0A0B4J262 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC14.68□□□□□ -0.06
TRAV8-6A0A0B4J262 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC14.68□□□□□ -0.06
TRAV8-6A0A0B4J262 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC14.68□□□□□ -0.06
TRAV8-6A0A0B4J262 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRAV8-6A0A0B4J262 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRAV8-6A0A0B4J262 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
TRAV8-6A0A0B4J262 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC14.68□□□□□ -0.06
TRAV8-6A0A0B4J262 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRAV8-6A0A0B4J262 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRAV8-6A0A0B4J262 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
TRAV8-6A0A0B4J262 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC14.68□□□□□ -0.06
TRAV8-6A0A0B4J262 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRAV8-6A0A0B4J262 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
TRAV8-6A0A0B4J262 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC14.68□□□□□ -0.06
TRAV8-6A0A0B4J262 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRAV8-6A0A0B4J262 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC14.68□□□□□ -0.06
TRAV8-6A0A0B4J262 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
TRAV8-6A0A0B4J262 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRAV8-6A0A0B4J262 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRAV8-6A0A0B4J262 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRAV8-6A0A0B4J262 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
TRAV8-6A0A0B4J262 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC14.67□□□□□ -0.06
TRAV8-6A0A0B4J262 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC14.67□□□□□ -0.06
TRAV8-6A0A0B4J262 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRAV8-6A0A0B4J262 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRAV8-6A0A0B4J262 GUK1-205ENST00000366722 850 ntTSL 3 BASIC14.67□□□□□ -0.06
TRAV8-6A0A0B4J262 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRAV8-6A0A0B4J262 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
TRAV8-6A0A0B4J262 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC14.67□□□□□ -0.06
TRAV8-6A0A0B4J262 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC14.67□□□□□ -0.06
TRAV8-6A0A0B4J262 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRAV8-6A0A0B4J262 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
TRAV8-6A0A0B4J262 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRAV8-6A0A0B4J262 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRAV8-6A0A0B4J262 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRAV8-6A0A0B4J262 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRAV8-6A0A0B4J262 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRAV8-6A0A0B4J262 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRAV8-6A0A0B4J262 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRAV8-6A0A0B4J262 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
TRAV8-6A0A0B4J262 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
TRAV8-6A0A0B4J262 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRAV8-6A0A0B4J262 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
TRAV8-6A0A0B4J262 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRAV8-6A0A0B4J262 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC14.67□□□□□ -0.06
TRAV8-6A0A0B4J262 AP006587.3-201ENST00000525742 1516 ntBASIC14.66□□□□□ -0.06
TRAV8-6A0A0B4J262 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRAV8-6A0A0B4J262 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRAV8-6A0A0B4J262 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRAV8-6A0A0B4J262 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRAV8-6A0A0B4J262 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC14.66□□□□□ -0.06
TRAV8-6A0A0B4J262 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
TRAV8-6A0A0B4J262 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRAV8-6A0A0B4J262 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRAV8-6A0A0B4J262 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRAV8-6A0A0B4J262 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC14.66□□□□□ -0.06
TRAV8-6A0A0B4J262 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC14.66□□□□□ -0.06
TRAV8-6A0A0B4J262 AC005224.4-201ENST00000583262 1652 ntBASIC14.66□□□□□ -0.06
TRAV8-6A0A0B4J262 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRAV8-6A0A0B4J262 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC14.66□□□□□ -0.06
TRAV8-6A0A0B4J262 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
TRAV8-6A0A0B4J262 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC14.66□□□□□ -0.06
TRAV8-6A0A0B4J262 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC14.66□□□□□ -0.06
TRAV8-6A0A0B4J262 MIR6084-201ENST00000622012 110 ntBASIC14.66□□□□□ -0.06
TRAV8-6A0A0B4J262 AL133373.2-201ENST00000623187 2828 ntBASIC14.66□□□□□ -0.06
TRAV8-6A0A0B4J262 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
TRAV8-6A0A0B4J262 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRAV8-6A0A0B4J262 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRAV8-6A0A0B4J262 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC14.66□□□□□ -0.06
TRAV8-6A0A0B4J262 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
TRAV8-6A0A0B4J262 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRAV8-6A0A0B4J262 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRAV8-6A0A0B4J262 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC14.66□□□□□ -0.06
TRAV8-6A0A0B4J262 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
TRAV8-6A0A0B4J262 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC14.65□□□□□ -0.06
TRAV8-6A0A0B4J262 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRAV8-6A0A0B4J262 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRAV8-6A0A0B4J262 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC14.65□□□□□ -0.06
TRAV8-6A0A0B4J262 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRAV8-6A0A0B4J262 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRAV8-6A0A0B4J262 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRAV8-6A0A0B4J262 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
TRAV8-6A0A0B4J262 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRAV8-6A0A0B4J262 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRAV8-6A0A0B4J262 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC14.65□□□□□ -0.06
TRAV8-6A0A0B4J262 AC027612.3-201ENST00000413684 1047 ntBASIC14.65□□□□□ -0.06
TRAV8-6A0A0B4J262 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
TRAV8-6A0A0B4J262 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC14.65□□□□□ -0.06
TRAV8-6A0A0B4J262 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
TRAV8-6A0A0B4J262 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 120.9 ms