Protein–RNA interactions for Protein: Q08387

DNL4, DNA ligase 4, yeastyeast

Predicted RBP Predictions only

Length 944 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
DNL4Q08387 YJL120WYJL120W 324 nt1.09□□□□□ -2.23
DNL4Q08387 YBR206WYBR206W 324 nt1.09□□□□□ -2.23
DNL4Q08387 FIG4YNL325C 2640 nt1.09□□□□□ -2.24
DNL4Q08387 PTP2YOR208W 2253 nt1.09□□□□□ -2.24
DNL4Q08387 CDC39YCR093W 6327 nt1.08□□□□□ -2.24
DNL4Q08387 YDR521WYDR521W 336 nt1.08□□□□□ -2.24
DNL4Q08387 YGL041CYGL041C 204 nt1.08□□□□□ -2.24
DNL4Q08387 YGL052WYGL052W 306 nt1.08□□□□□ -2.24
DNL4Q08387 GPG1YGL121C 381 nt1.08□□□□□ -2.24
DNL4Q08387 YOR218CYOR218C 420 nt1.08□□□□□ -2.24
DNL4Q08387 BEM2YER155C 6504 nt1.08□□□□□ -2.24
DNL4Q08387 YDL206WYDL206W 2289 nt1.08□□□□□ -2.24
DNL4Q08387 EAF1YDR359C 2949 nt1.07□□□□□ -2.24
DNL4Q08387 ECM12YHR021W-A 456 nt1.07□□□□□ -2.24
DNL4Q08387 YJL197C-AYJL197C-A 282 nt1.07□□□□□ -2.24
DNL4Q08387 YLR120W-AYLR120W-A 102 nt1.07□□□□□ -2.24
DNL4Q08387 YMR321CYMR321C 318 nt1.07□□□□□ -2.24
DNL4Q08387 YOR011W-AYOR011W-A 207 nt1.07□□□□□ -2.24
DNL4Q08387 IES4YOR189W 351 nt1.07□□□□□ -2.24
DNL4Q08387 snR49snR49 165 nt1.07□□□□□ -2.24
DNL4Q08387 AIM44YPL158C 2277 nt1.06□□□□□ -2.24
DNL4Q08387 YMR172C-AYMR172C-A 384 nt1.06□□□□□ -2.24
DNL4Q08387 SET3YKR029C 2256 nt1.06□□□□□ -2.24
DNL4Q08387 IFH1YLR223C 3258 nt1.06□□□□□ -2.24
DNL4Q08387 STB6YKL072W 2301 nt1.06□□□□□ -2.24
DNL4Q08387 MMS4YBR098W 2076 nt1.05□□□□□ -2.24
DNL4Q08387 STO1YMR125W 2586 nt1.04□□□□□ -2.24
DNL4Q08387 EMT1tM(CAU)D 73 nt1.04□□□□□ -2.24
DNL4Q08387 EMT5tM(CAU)J1 73 nt1.04□□□□□ -2.24
DNL4Q08387 EMT3tM(CAU)J2 73 nt1.04□□□□□ -2.24
DNL4Q08387 EMT4tM(CAU)M 73 nt1.04□□□□□ -2.24
DNL4Q08387 YGL188C-AYGL188C-A 141 nt1.04□□□□□ -2.24
DNL4Q08387 EMT2tM(CAU)O2 73 nt1.04□□□□□ -2.24
DNL4Q08387 YPR092WYPR092W 306 nt1.04□□□□□ -2.24
DNL4Q08387 YBR221W-AYBR221W-A 105 nt1.04□□□□□ -2.24
DNL4Q08387 snR80snR80 171 nt1.03□□□□□ -2.24
DNL4Q08387 GEA2YEL022W 4380 nt1.02□□□□□ -2.25
DNL4Q08387 snR55snR55 98 nt1.02□□□□□ -2.25
DNL4Q08387 snR74snR74 88 nt1.02□□□□□ -2.25
DNL4Q08387 MCM10YIL150C 1716 nt1.02□□□□□ -2.25
DNL4Q08387 YOL155W-AYOL155W-A 135 nt1.02□□□□□ -2.25
DNL4Q08387 SGF11YPL047W 300 nt1.02□□□□□ -2.25
DNL4Q08387 UTP20YBL004W 7482 nt1.02□□□□□ -2.25
DNL4Q08387 YMR158W-BYMR158W-B 321 nt1.01□□□□□ -2.25
DNL4Q08387 YMR307C-AYMR307C-A 195 nt1.01□□□□□ -2.25
DNL4Q08387 tF(GAA)BtF(GAA)B 73 nt1□□□□□ -2.25
DNL4Q08387 tF(GAA)FtF(GAA)F 73 nt1□□□□□ -2.25
DNL4Q08387 tF(GAA)GtF(GAA)G 73 nt1□□□□□ -2.25
DNL4Q08387 tF(GAA)H1tF(GAA)H1 73 nt1□□□□□ -2.25
DNL4Q08387 tF(GAA)H2tF(GAA)H2 73 nt1□□□□□ -2.25
DNL4Q08387 tF(GAA)MtF(GAA)M 73 nt1□□□□□ -2.25
DNL4Q08387 tF(GAA)P1tF(GAA)P1 73 nt1□□□□□ -2.25
DNL4Q08387 tF(GAA)P2tF(GAA)P2 73 nt1□□□□□ -2.25
DNL4Q08387 QCR9YGR183C 201 nt1□□□□□ -2.25
DNL4Q08387 ABF2YMR072W 552 nt1□□□□□ -2.25
DNL4Q08387 SMC1YFL008W 3678 nt1□□□□□ -2.25
DNL4Q08387 PAN2YGL094C 3348 nt0.99□□□□□ -2.25
DNL4Q08387 NUP157YER105C 4176 nt0.99□□□□□ -2.25
DNL4Q08387 YPR117WYPR117W 7470 nt0.98□□□□□ -2.25
DNL4Q08387 YLL019W-AYLL019W-A 93 nt0.98□□□□□ -2.25
DNL4Q08387 YBR200W-AYBR200W-A 165 nt0.98□□□□□ -2.25
DNL4Q08387 NPR2YEL062W 1848 nt0.98□□□□□ -2.25
DNL4Q08387 WAR1YML076C 2835 nt0.97□□□□□ -2.25
DNL4Q08387 YDR354C-AYDR354C-A 144 nt0.97□□□□□ -2.25
DNL4Q08387 tF(GAA)QtF(GAA)Q 75 nt0.97□□□□□ -2.25
DNL4Q08387 OLI1Q0130 231 nt0.96□□□□□ -2.26
DNL4Q08387 YIL142C-AYIL142C-A 333 nt0.96□□□□□ -2.26
DNL4Q08387 YOR072W-BYOR072W-B 162 nt0.96□□□□□ -2.26
DNL4Q08387 KAP120YPL125W 3099 nt0.94□□□□□ -2.26
DNL4Q08387 YNL211CYNL211C 261 nt0.93□□□□□ -2.26
DNL4Q08387 YIR030W-AYIR030W-A 384 nt0.92□□□□□ -2.26
DNL4Q08387 YOR302WYOR302W 78 nt0.92□□□□□ -2.26
DNL4Q08387 CMC4YMR194C-B 222 nt0.91□□□□□ -2.26
DNL4Q08387 YBR182C-AYBR182C-A 195 nt0.91□□□□□ -2.26
DNL4Q08387 YKU70YMR284W 1809 nt0.91□□□□□ -2.26
DNL4Q08387 YDL196WYDL196W 330 nt0.9□□□□□ -2.27
DNL4Q08387 YBR131C-AYBR131C-A 90 nt0.9□□□□□ -2.27
DNL4Q08387 YOR345CYOR345C 351 nt0.89□□□□□ -2.27
DNL4Q08387 YMR160WYMR160W 2451 nt0.88□□□□□ -2.27
DNL4Q08387 PAA1YDR071C 576 nt0.88□□□□□ -2.27
DNL4Q08387 YJL026C-AYJL026C-A 222 nt0.88□□□□□ -2.27
DNL4Q08387 YDL073WYDL073W 2955 nt0.87□□□□□ -2.27
DNL4Q08387 YFR012W-AYFR012W-A 87 nt0.87□□□□□ -2.27
DNL4Q08387 NOP9YJL010C 2001 nt0.87□□□□□ -2.27
DNL4Q08387 YAL067W-AYAL067W-A 228 nt0.86□□□□□ -2.27
DNL4Q08387 JLP2YMR132C 627 nt0.86□□□□□ -2.27
DNL4Q08387 SPG3YDR504C 384 nt0.85□□□□□ -2.27
DNL4Q08387 ULI1YFR026C 510 nt0.85□□□□□ -2.27
DNL4Q08387 YPL044CYPL044C 549 nt0.85□□□□□ -2.27
DNL4Q08387 YCR018C-AYCR018C-A 255 nt0.84□□□□□ -2.27
DNL4Q08387 YDL185C-AYDL185C-A 228 nt0.84□□□□□ -2.27
DNL4Q08387 ISD11YER048W-A 285 nt0.84□□□□□ -2.27
DNL4Q08387 COY1YKL179C 2040 nt0.84□□□□□ -2.28
DNL4Q08387 PRP16YKR086W 3216 nt0.83□□□□□ -2.28
DNL4Q08387 COX12YLR038C 252 nt0.82□□□□□ -2.28
DNL4Q08387 YOL014WYOL014W 375 nt0.82□□□□□ -2.28
DNL4Q08387 BFR2YDR299W 1605 nt0.82□□□□□ -2.28
DNL4Q08387 YCR038W-AYCR038W-A 126 nt0.81□□□□□ -2.28
DNL4Q08387 YIL134C-AYIL134C-A 204 nt0.81□□□□□ -2.28
DNL4Q08387 BLI1YKL061W 342 nt0.81□□□□□ -2.28
Retrieved 100 of 7,029 protein–RNA pairs in 49.4 ms