Protein–RNA interactions for Protein: Q07979

RSC58, Chromatin structure-remodeling complex protein RSC58, yeastyeast

Predictions only

Length 502 aa.

Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RSC58Q07979 TMA7YLR262C-A 195 nt2.08□□□□□ -2.08
RSC58Q07979 NUP170YBL079W 4509 nt2.08□□□□□ -2.08
RSC58Q07979 YDL206WYDL206W 2289 nt2.07□□□□□ -2.08
RSC58Q07979 SPP41YDR464W 4308 nt2.06□□□□□ -2.08
RSC58Q07979 MSB1YOR188W 3414 nt2.06□□□□□ -2.08
RSC58Q07979 YAL067W-AYAL067W-A 228 nt2.06□□□□□ -2.08
RSC58Q07979 STF2YGR008C 255 nt2.04□□□□□ -2.08
RSC58Q07979 UTP8YGR128C 2142 nt2.04□□□□□ -2.08
RSC58Q07979 MYO4YAL029C 4416 nt2.04□□□□□ -2.08
RSC58Q07979 UFD2YDL190C 2886 nt2.03□□□□□ -2.08
RSC58Q07979 YGL123C-AYGL123C-A 231 nt2.03□□□□□ -2.08
RSC58Q07979 QCR9YGR183C 201 nt2.03□□□□□ -2.08
RSC58Q07979 YLL020CYLL020C 306 nt2.03□□□□□ -2.08
RSC58Q07979 STB6YKL072W 2301 nt2.03□□□□□ -2.08
RSC58Q07979 SEC63YOR254C 1992 nt2.03□□□□□ -2.08
RSC58Q07979 SFB2YNL049C 2631 nt2.03□□□□□ -2.09
RSC58Q07979 YER172C-AYER172C-A 381 nt2.02□□□□□ -2.09
RSC58Q07979 SPO24YPR036W-A 204 nt2.02□□□□□ -2.09
RSC58Q07979 BFR2YDR299W 1605 nt2.02□□□□□ -2.09
RSC58Q07979 SEY1YOR165W 2331 nt2.01□□□□□ -2.09
RSC58Q07979 YBL039C-AYBL039C-A 84 nt2□□□□□ -2.09
RSC58Q07979 TFC3YAL001C 3483 nt2□□□□□ -2.09
RSC58Q07979 POL5YEL055C 3069 nt2□□□□□ -2.09
RSC58Q07979 UBP2YOR124C 3819 nt2□□□□□ -2.09
RSC58Q07979 YHR131W-AYHR131W-A 246 nt1.99□□□□□ -2.09
RSC58Q07979 SLN1YIL147C 3663 nt1.99□□□□□ -2.09
RSC58Q07979 SEC16YPL085W 6588 nt1.99□□□□□ -2.09
RSC58Q07979 TRM3YDL112W 4311 nt1.98□□□□□ -2.09
RSC58Q07979 YIL142C-AYIL142C-A 333 nt1.98□□□□□ -2.09
RSC58Q07979 YOR161W-AYOR161W-A 81 nt1.98□□□□□ -2.09
RSC58Q07979 snR39BsnR39B 96 nt1.98□□□□□ -2.09
RSC58Q07979 UTP21YLR409C 2820 nt1.97□□□□□ -2.09
RSC58Q07979 GCN2YDR283C 4980 nt1.97□□□□□ -2.09
RSC58Q07979 COA6YMR244C-A 315 nt1.97□□□□□ -2.09
RSC58Q07979 TDA9YML081W 3756 nt1.97□□□□□ -2.09
RSC58Q07979 MSH6YDR097C 3729 nt1.97□□□□□ -2.09
RSC58Q07979 TOR2YKL203C 7425 nt1.96□□□□□ -2.1
RSC58Q07979 NUT1YGL151W 3399 nt1.96□□□□□ -2.1
RSC58Q07979 YJR039WYJR039W 3366 nt1.96□□□□□ -2.1
RSC58Q07979 YJL052C-AYJL052C-A 120 nt1.96□□□□□ -2.1
RSC58Q07979 DGR1YNL130C-A 147 nt1.96□□□□□ -2.1
RSC58Q07979 RSM22YKL155C 1887 nt1.96□□□□□ -2.1
RSC58Q07979 BPH1YCR032W 6504 nt1.96□□□□□ -2.1
RSC58Q07979 UFD4YKL010C 4452 nt1.95□□□□□ -2.1
RSC58Q07979 YKL100W-AYKL100W-A 90 nt1.95□□□□□ -2.1
RSC58Q07979 EAF1YDR359C 2949 nt1.95□□□□□ -2.1
RSC58Q07979 YMR045CYMR045C 5268 nt1.95□□□□□ -2.1
RSC58Q07979 SEC31YDL195W 3822 nt1.94□□□□□ -2.1
RSC58Q07979 TAH1YCR060W 336 nt1.94□□□□□ -2.1
RSC58Q07979 RCO1YMR075W 2055 nt1.94□□□□□ -2.1
RSC58Q07979 TBS1YBR150C 3285 nt1.93□□□□□ -2.1
RSC58Q07979 COX5BYIL111W 456 nt1.93□□□□□ -2.1
RSC58Q07979 UBR2YLR024C 5619 nt1.93□□□□□ -2.1
RSC58Q07979 RAD50YNL250W 3939 nt1.93□□□□□ -2.1
RSC58Q07979 YLR419WYLR419W 4308 nt1.93□□□□□ -2.1
RSC58Q07979 NUP157YER105C 4176 nt1.92□□□□□ -2.1
RSC58Q07979 ALY2YJL084C 3141 nt1.92□□□□□ -2.1
RSC58Q07979 tS(GCU)Q1tS(GCU)Q1 86 nt1.91□□□□□ -2.1
RSC58Q07979 BRE1YDL074C 2103 nt1.91□□□□□ -2.1
RSC58Q07979 PAN2YGL094C 3348 nt1.91□□□□□ -2.1
RSC58Q07979 PKH3YDR466W 2697 nt1.9□□□□□ -2.1
RSC58Q07979 MMS4YBR098W 2076 nt1.89□□□□□ -2.11
RSC58Q07979 EMC5YIL027C 426 nt1.89□□□□□ -2.11
RSC58Q07979 NEO1YIL048W 3456 nt1.88□□□□□ -2.11
RSC58Q07979 tM(CAU)Q2tM(CAU)Q2 78 nt1.88□□□□□ -2.11
RSC58Q07979 YAR009CYAR009C 3591 nt1.88□□□□□ -2.11
RSC58Q07979 GYP5YPL249C 2685 nt1.86□□□□□ -2.11
RSC58Q07979 YML002WYML002W 2214 nt1.86□□□□□ -2.11
RSC58Q07979 YHR214C-BYHR214C-B 5382 nt1.86□□□□□ -2.11
RSC58Q07979 SMC1YFL008W 3678 nt1.86□□□□□ -2.11
RSC58Q07979 SAC3YDR159W 3906 nt1.86□□□□□ -2.11
RSC58Q07979 KIP1YBL063W 3336 nt1.86□□□□□ -2.11
RSC58Q07979 YLL066W-BYLL066W-B 171 nt1.85□□□□□ -2.11
RSC58Q07979 UTP22YGR090W 3714 nt1.85□□□□□ -2.11
RSC58Q07979 SLX4YLR135W 2247 nt1.85□□□□□ -2.11
RSC58Q07979 RTP1YMR185W 2946 nt1.84□□□□□ -2.11
RSC58Q07979 YMR247W-AYMR247W-A 144 nt1.84□□□□□ -2.11
RSC58Q07979 snR14snR14 160 nt1.84□□□□□ -2.11
RSC58Q07979 SEC21YNL287W 2808 nt1.83□□□□□ -2.12
RSC58Q07979 SMC4YLR086W 4257 nt1.83□□□□□ -2.12
RSC58Q07979 COG6YNL041C 2520 nt1.82□□□□□ -2.12
RSC58Q07979 FKS1YLR342W 5631 nt1.82□□□□□ -2.12
RSC58Q07979 snR81snR81 201 nt1.82□□□□□ -2.12
RSC58Q07979 tT(UGU)HtT(UGU)H 72 nt1.82□□□□□ -2.12
RSC58Q07979 snR45snR45 172 nt1.82□□□□□ -2.12
RSC58Q07979 REV3YPL167C 4515 nt1.81□□□□□ -2.12
RSC58Q07979 YLR041WYLR041W 321 nt1.8□□□□□ -2.12
RSC58Q07979 FYV10YIL097W 1551 nt1.8□□□□□ -2.12
RSC58Q07979 SKI3YPR189W 4299 nt1.79□□□□□ -2.12
RSC58Q07979 YDR210WYDR210W 228 nt1.79□□□□□ -2.12
RSC58Q07979 YLR232WYLR232W 348 nt1.79□□□□□ -2.12
RSC58Q07979 KAP120YPL125W 3099 nt1.79□□□□□ -2.12
RSC58Q07979 NOP9YJL010C 2001 nt1.78□□□□□ -2.12
RSC58Q07979 YJL127W-AYJL127W-A 117 nt1.78□□□□□ -2.12
RSC58Q07979 MYO2YOR326W 4725 nt1.78□□□□□ -2.12
RSC58Q07979 KAP122YGL016W 3246 nt1.76□□□□□ -2.13
RSC58Q07979 KCS1YDR017C 3153 nt1.75□□□□□ -2.13
RSC58Q07979 snR190snR190 190 nt1.75□□□□□ -2.13
RSC58Q07979 STO1YMR125W 2586 nt1.75□□□□□ -2.13
RSC58Q07979 BIR1YJR089W 2865 nt1.74□□□□□ -2.13
Retrieved 100 of 7,029 protein–RNA pairs in 40.5 ms