Protein–RNA interactions for Protein: P53899

CUZ1, CDC48-associated ubiquitin-like/zinc finger protein 1, yeastyeast

Predictions only

Length 274 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CUZ1P53899 CTR9YOL145C 3234 nt2.35□□□□□ -2.03
CUZ1P53899 SEC21YNL287W 2808 nt2.33□□□□□ -2.04
CUZ1P53899 ORC3YLL004W 1851 nt2.33□□□□□ -2.04
CUZ1P53899 CDC60YPL160W 3273 nt2.33□□□□□ -2.04
CUZ1P53899 COA6YMR244C-A 315 nt2.33□□□□□ -2.04
CUZ1P53899 ASE1YOR058C 2658 nt2.33□□□□□ -2.04
CUZ1P53899 TRA1YHR099W 11235 nt2.33□□□□□ -2.04
CUZ1P53899 PDR3YBL005W 2931 nt2.32□□□□□ -2.04
CUZ1P53899 YLR286W-AYLR286W-A 135 nt2.32□□□□□ -2.04
CUZ1P53899 NAB6YML117W 3405 nt2.32□□□□□ -2.04
CUZ1P53899 SEY1YOR165W 2331 nt2.31□□□□□ -2.04
CUZ1P53899 TRM3YDL112W 4311 nt2.31□□□□□ -2.04
CUZ1P53899 PRP8YHR165C 7242 nt2.31□□□□□ -2.04
CUZ1P53899 GCN2YDR283C 4980 nt2.3□□□□□ -2.04
CUZ1P53899 ESL2YKR096W 3588 nt2.3□□□□□ -2.04
CUZ1P53899 YER078W-AYER078W-A 165 nt2.3□□□□□ -2.04
CUZ1P53899 ESC1YMR219W 4977 nt2.3□□□□□ -2.04
CUZ1P53899 IRE1YHR079C 3348 nt2.29□□□□□ -2.04
CUZ1P53899 SVL3YPL032C 2478 nt2.29□□□□□ -2.04
CUZ1P53899 UBR1YGR184C 5853 nt2.29□□□□□ -2.04
CUZ1P53899 YLR041WYLR041W 321 nt2.29□□□□□ -2.04
CUZ1P53899 YEF3YLR249W 3135 nt2.29□□□□□ -2.04
CUZ1P53899 YOR343W-BYOR343W-B 5313 nt2.28□□□□□ -2.04
CUZ1P53899 TUS1YLR425W 3924 nt2.28□□□□□ -2.04
CUZ1P53899 SGS1YMR190C 4344 nt2.28□□□□□ -2.04
CUZ1P53899 TRS130YMR218C 3309 nt2.27□□□□□ -2.05
CUZ1P53899 PDR1YGL013C 3207 nt2.27□□□□□ -2.05
CUZ1P53899 TIM9YEL020W-A 264 nt2.27□□□□□ -2.05
CUZ1P53899 CHC1YGL206C 4962 nt2.27□□□□□ -2.05
CUZ1P53899 UFD4YKL010C 4452 nt2.26□□□□□ -2.05
CUZ1P53899 TRL1YJL087C 2484 nt2.26□□□□□ -2.05
CUZ1P53899 PDR11YIL013C 4236 nt2.25□□□□□ -2.05
CUZ1P53899 PET309YLR067C 2898 nt2.25□□□□□ -2.05
CUZ1P53899 ALY2YJL084C 3141 nt2.25□□□□□ -2.05
CUZ1P53899 SYH1YPL105C 2550 nt2.25□□□□□ -2.05
CUZ1P53899 IRA2YOL081W 9240 nt2.24□□□□□ -2.05
CUZ1P53899 NOP9YJL010C 2001 nt2.24□□□□□ -2.05
CUZ1P53899 SPO24YPR036W-A 204 nt2.23□□□□□ -2.05
CUZ1P53899 TOF1YNL273W 3717 nt2.22□□□□□ -2.05
CUZ1P53899 GEA1YJR031C 4227 nt2.22□□□□□ -2.05
CUZ1P53899 YHR086W-AYHR086W-A 162 nt2.22□□□□□ -2.05
CUZ1P53899 SMC1YFL008W 3678 nt2.21□□□□□ -2.06
CUZ1P53899 SEC10YLR166C 2616 nt2.21□□□□□ -2.06
CUZ1P53899 MYO2YOR326W 4725 nt2.21□□□□□ -2.06
CUZ1P53899 ARP8YOR141C 2646 nt2.21□□□□□ -2.06
CUZ1P53899 RAD9YDR217C 3930 nt2.2□□□□□ -2.06
CUZ1P53899 YPR097WYPR097W 3222 nt2.2□□□□□ -2.06
CUZ1P53899 snR75snR75 89 nt2.2□□□□□ -2.06
CUZ1P53899 YOR055WYOR055W 435 nt2.2□□□□□ -2.06
CUZ1P53899 RPM2YML091C 3609 nt2.2□□□□□ -2.06
CUZ1P53899 PAN2YGL094C 3348 nt2.2□□□□□ -2.06
CUZ1P53899 GIP3YPL137C 3831 nt2.2□□□□□ -2.06
CUZ1P53899 RGA1YOR127W 3024 nt2.2□□□□□ -2.06
CUZ1P53899 HSL1YKL101W 4557 nt2.19□□□□□ -2.06
CUZ1P53899 YKL096C-BYKL096C-B 150 nt2.19□□□□□ -2.06
CUZ1P53899 SFB2YNL049C 2631 nt2.19□□□□□ -2.06
CUZ1P53899 SAP1YER047C 2694 nt2.18□□□□□ -2.06
CUZ1P53899 RPS29AYLR388W 171 nt2.18□□□□□ -2.06
CUZ1P53899 GYP5YPL249C 2685 nt2.18□□□□□ -2.06
CUZ1P53899 HIR3YJR140C 4947 nt2.17□□□□□ -2.06
CUZ1P53899 SLN1YIL147C 3663 nt2.16□□□□□ -2.06
CUZ1P53899 MMS4YBR098W 2076 nt2.16□□□□□ -2.06
CUZ1P53899 NUT1YGL151W 3399 nt2.16□□□□□ -2.06
CUZ1P53899 FLO11YIR019C 4104 nt2.16□□□□□ -2.06
CUZ1P53899 YDR209CYDR209C 414 nt2.16□□□□□ -2.06
CUZ1P53899 RPL26BYGR034W 384 nt2.16□□□□□ -2.06
CUZ1P53899 YKL225WYKL225W 348 nt2.16□□□□□ -2.06
CUZ1P53899 SRB8YCR081W 4284 nt2.15□□□□□ -2.06
CUZ1P53899 FAR11YNL127W 2862 nt2.15□□□□□ -2.07
CUZ1P53899 YBR200W-AYBR200W-A 165 nt2.15□□□□□ -2.07
CUZ1P53899 WAR1YML076C 2835 nt2.15□□□□□ -2.07
CUZ1P53899 UBP3YER151C 2739 nt2.15□□□□□ -2.07
CUZ1P53899 NUP170YBL079W 4509 nt2.14□□□□□ -2.07
CUZ1P53899 YAR009CYAR009C 3591 nt2.14□□□□□ -2.07
CUZ1P53899 RAV1YJR033C 4074 nt2.14□□□□□ -2.07
CUZ1P53899 AZF1YOR113W 2745 nt2.14□□□□□ -2.07
CUZ1P53899 YLR149C-AYLR149C-A 87 nt2.14□□□□□ -2.07
CUZ1P53899 LCL1YPL056C 306 nt2.14□□□□□ -2.07
CUZ1P53899 SSD1YDR293C 3753 nt2.14□□□□□ -2.07
CUZ1P53899 MSB1YOR188W 3414 nt2.13□□□□□ -2.07
CUZ1P53899 BNR1YIL159W 4128 nt2.13□□□□□ -2.07
CUZ1P53899 SCD5YOR329C 2619 nt2.13□□□□□ -2.07
CUZ1P53899 snR190snR190 190 nt2.13□□□□□ -2.07
CUZ1P53899 YDL073WYDL073W 2955 nt2.11□□□□□ -2.07
CUZ1P53899 UTP21YLR409C 2820 nt2.11□□□□□ -2.07
CUZ1P53899 PIK1YNL267W 3201 nt2.11□□□□□ -2.07
CUZ1P53899 YJL052C-AYJL052C-A 120 nt2.1□□□□□ -2.07
CUZ1P53899 RAD50YNL250W 3939 nt2.1□□□□□ -2.07
CUZ1P53899 TOP2YNL088W 4287 nt2.09□□□□□ -2.07
CUZ1P53899 PSD2YGR170W 3417 nt2.08□□□□□ -2.08
CUZ1P53899 RTT101YJL047C 2529 nt2.08□□□□□ -2.08
CUZ1P53899 VPS13YLL040C 9435 nt2.07□□□□□ -2.08
CUZ1P53899 NNF2YGR089W 2811 nt2.07□□□□□ -2.08
CUZ1P53899 SPF1YEL031W 3648 nt2.06□□□□□ -2.08
CUZ1P53899 CHS1YNL192W 3396 nt2.06□□□□□ -2.08
CUZ1P53899 KOG1YHR186C 4674 nt2.06□□□□□ -2.08
CUZ1P53899 TDA9YML081W 3756 nt2.05□□□□□ -2.08
CUZ1P53899 MSH6YDR097C 3729 nt2.05□□□□□ -2.08
CUZ1P53899 ROM2YLR371W 4071 nt2.04□□□□□ -2.08
CUZ1P53899 KIP1YBL063W 3336 nt2.04□□□□□ -2.08
Retrieved 100 of 7,029 protein–RNA pairs in 53.7 ms