Protein–RNA interactions for Protein: P53289

RTS3, Protein phosphatase type 2A regulatory subunit RTS3, yeastyeast

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RTS3P53289 YAF9YNL107W 681 nt1.02□□□□□ -2.25
RTS3P53289 ASE1YOR058C 2658 nt1.02□□□□□ -2.25
RTS3P53289 ECM12YHR021W-A 456 nt1.01□□□□□ -2.25
RTS3P53289 NHP2YDL208W 471 nt1□□□□□ -2.25
RTS3P53289 BEM2YER155C 6504 nt1□□□□□ -2.25
RTS3P53289 SEC8YPR055W 3198 nt1□□□□□ -2.25
RTS3P53289 HAL9YOL089C 3093 nt0.99□□□□□ -2.25
RTS3P53289 RPS27BYHR021C 249 nt0.99□□□□□ -2.25
RTS3P53289 YIL115W-AYIL115W-A 372 nt0.99□□□□□ -2.25
RTS3P53289 YNL211CYNL211C 261 nt0.99□□□□□ -2.25
RTS3P53289 SEC1YDR164C 2175 nt0.98□□□□□ -2.25
RTS3P53289 COG8YML071C 1824 nt0.97□□□□□ -2.25
RTS3P53289 ATP6Q0085 780 nt0.97□□□□□ -2.25
RTS3P53289 INA22YIR024C 651 nt0.97□□□□□ -2.25
RTS3P53289 PAM16YJL104W 450 nt0.97□□□□□ -2.25
RTS3P53289 CSE2YNR010W 450 nt0.97□□□□□ -2.25
RTS3P53289 YOR218CYOR218C 420 nt0.97□□□□□ -2.25
RTS3P53289 MYO1YHR023W 5787 nt0.96□□□□□ -2.26
RTS3P53289 NPR2YEL062W 1848 nt0.95□□□□□ -2.26
RTS3P53289 PAU12YGR294W 363 nt0.94□□□□□ -2.26
RTS3P53289 YIL142C-AYIL142C-A 333 nt0.94□□□□□ -2.26
RTS3P53289 YLR399W-AYLR399W-A 105 nt0.94□□□□□ -2.26
RTS3P53289 SGF11YPL047W 300 nt0.94□□□□□ -2.26
RTS3P53289 PAU24YBR301W 363 nt0.94□□□□□ -2.26
RTS3P53289 CHS6YJL099W 2241 nt0.93□□□□□ -2.26
RTS3P53289 HMRA1YCR097W 381 nt0.93□□□□□ -2.26
RTS3P53289 YAL067W-AYAL067W-A 228 nt0.93□□□□□ -2.26
RTS3P53289 RKR1YMR247C 4689 nt0.93□□□□□ -2.26
RTS3P53289 YPR159C-AYPR159C-A 102 nt0.93□□□□□ -2.26
RTS3P53289 YPR160W-AYPR160W-A 81 nt0.91□□□□□ -2.26
RTS3P53289 VIK1YPL253C 1944 nt0.91□□□□□ -2.26
RTS3P53289 GIM4YEL003W 336 nt0.9□□□□□ -2.27
RTS3P53289 YFL063WYFL063W 456 nt0.9□□□□□ -2.27
RTS3P53289 YIL032CYIL032C 357 nt0.9□□□□□ -2.27
RTS3P53289 YGL149WYGL149W 306 nt0.89□□□□□ -2.27
RTS3P53289 FYV10YIL097W 1551 nt0.88□□□□□ -2.27
RTS3P53289 RPL39YJL189W 156 nt0.88□□□□□ -2.27
RTS3P53289 YMR307C-AYMR307C-A 195 nt0.88□□□□□ -2.27
RTS3P53289 snR36snR36 182 nt0.88□□□□□ -2.27
RTS3P53289 snR56snR56 88 nt0.87□□□□□ -2.27
RTS3P53289 tF(GAA)BtF(GAA)B 73 nt0.87□□□□□ -2.27
RTS3P53289 tF(GAA)FtF(GAA)F 73 nt0.87□□□□□ -2.27
RTS3P53289 tF(GAA)GtF(GAA)G 73 nt0.87□□□□□ -2.27
RTS3P53289 tF(GAA)H1tF(GAA)H1 73 nt0.87□□□□□ -2.27
RTS3P53289 tF(GAA)H2tF(GAA)H2 73 nt0.87□□□□□ -2.27
RTS3P53289 tF(GAA)MtF(GAA)M 73 nt0.87□□□□□ -2.27
RTS3P53289 tF(GAA)P1tF(GAA)P1 73 nt0.87□□□□□ -2.27
RTS3P53289 tF(GAA)P2tF(GAA)P2 73 nt0.87□□□□□ -2.27
RTS3P53289 YFR012W-AYFR012W-A 87 nt0.87□□□□□ -2.27
RTS3P53289 YHR175W-AYHR175W-A 150 nt0.87□□□□□ -2.27
RTS3P53289 YMR160WYMR160W 2451 nt0.86□□□□□ -2.27
RTS3P53289 snR60snR60 104 nt0.86□□□□□ -2.27
RTS3P53289 YMR193C-AYMR193C-A 387 nt0.85□□□□□ -2.27
RTS3P53289 MLP1YKR095W 5628 nt0.85□□□□□ -2.27
RTS3P53289 QCR9YGR183C 201 nt0.84□□□□□ -2.27
RTS3P53289 YJL026C-AYJL026C-A 222 nt0.84□□□□□ -2.27
RTS3P53289 YKL118WYKL118W 312 nt0.84□□□□□ -2.27
RTS3P53289 snR190snR190 190 nt0.83□□□□□ -2.28
RTS3P53289 PRP5YBR237W 2550 nt0.83□□□□□ -2.28
RTS3P53289 YCR018C-AYCR018C-A 255 nt0.82□□□□□ -2.28
RTS3P53289 YML002WYML002W 2214 nt0.82□□□□□ -2.28
RTS3P53289 MLP2YIL149C 5040 nt0.81□□□□□ -2.28
RTS3P53289 YNL028WYNL028W 318 nt0.81□□□□□ -2.28
RTS3P53289 YDR354C-AYDR354C-A 144 nt0.8□□□□□ -2.28
RTS3P53289 YEL020C-BYEL020C-B 198 nt0.8□□□□□ -2.28
RTS3P53289 COX5BYIL111W 456 nt0.8□□□□□ -2.28
RTS3P53289 YMR031W-AYMR031W-A 327 nt0.8□□□□□ -2.28
RTS3P53289 YDL185C-AYDL185C-A 228 nt0.79□□□□□ -2.28
RTS3P53289 BIR1YJR089W 2865 nt0.78□□□□□ -2.28
RTS3P53289 YJL127W-AYJL127W-A 117 nt0.78□□□□□ -2.28
RTS3P53289 YJL197C-AYJL197C-A 282 nt0.78□□□□□ -2.28
RTS3P53289 OST4YDL232W 111 nt0.77□□□□□ -2.29
RTS3P53289 YFL032WYFL032W 321 nt0.77□□□□□ -2.29
RTS3P53289 YKL136WYKL136W 399 nt0.77□□□□□ -2.29
RTS3P53289 tR(ACG)Q2tR(ACG)Q2 74 nt0.76□□□□□ -2.29
RTS3P53289 STE5YDR103W 2754 nt0.75□□□□□ -2.29
RTS3P53289 PRP42YDR235W 1635 nt0.75□□□□□ -2.29
RTS3P53289 YER097WYER097W 330 nt0.74□□□□□ -2.29
RTS3P53289 YIL134C-AYIL134C-A 204 nt0.74□□□□□ -2.29
RTS3P53289 YDR413CYDR413C 576 nt0.73□□□□□ -2.29
RTS3P53289 tT(AGU)BtT(AGU)B 73 nt0.73□□□□□ -2.29
RTS3P53289 tT(AGU)CtT(AGU)C 73 nt0.73□□□□□ -2.29
RTS3P53289 tT(AGU)DtT(AGU)D 73 nt0.73□□□□□ -2.29
RTS3P53289 tT(AGU)HtT(AGU)H 73 nt0.73□□□□□ -2.29
RTS3P53289 tT(AGU)I1tT(AGU)I1 73 nt0.73□□□□□ -2.29
RTS3P53289 tT(AGU)I2tT(AGU)I2 73 nt0.73□□□□□ -2.29
RTS3P53289 tT(AGU)JtT(AGU)J 73 nt0.73□□□□□ -2.29
RTS3P53289 tT(AGU)N1tT(AGU)N1 73 nt0.73□□□□□ -2.29
RTS3P53289 tT(AGU)N2tT(AGU)N2 73 nt0.73□□□□□ -2.29
RTS3P53289 tT(AGU)O1tT(AGU)O1 73 nt0.73□□□□□ -2.29
RTS3P53289 tT(AGU)O2tT(AGU)O2 73 nt0.73□□□□□ -2.29
RTS3P53289 YKL100W-AYKL100W-A 90 nt0.73□□□□□ -2.29
RTS3P53289 YMR272W-AYMR272W-A 114 nt0.73□□□□□ -2.29
RTS3P53289 YLR282CYLR282C 342 nt0.72□□□□□ -2.29
RTS3P53289 YOR015WYOR015W 360 nt0.71□□□□□ -2.3
RTS3P53289 ULP2YIL031W 3105 nt0.7□□□□□ -2.3
RTS3P53289 YCR022CYCR022C 345 nt0.69□□□□□ -2.3
RTS3P53289 PET111YMR257C 2403 nt0.68□□□□□ -2.3
RTS3P53289 YOL014WYOL014W 375 nt0.68□□□□□ -2.3
RTS3P53289 YLR120W-AYLR120W-A 102 nt0.67□□□□□ -2.3
Retrieved 100 of 7,029 protein–RNA pairs in 19.6 ms