Protein–RNA interactions for Protein: P53172

SDS23, Protein SDS23, yeastyeast

Predictions only

Length 527 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SDS23P53172 YHR063W-AYHR063W-A 336 nt0.66□□□□□ -2.3
SDS23P53172 YMR321CYMR321C 318 nt0.66□□□□□ -2.3
SDS23P53172 snR36snR36 182 nt0.66□□□□□ -2.3
SDS23P53172 tR(ACG)Q2tR(ACG)Q2 74 nt0.65□□□□□ -2.31
SDS23P53172 YDL073WYDL073W 2955 nt0.65□□□□□ -2.31
SDS23P53172 NPR2YEL062W 1848 nt0.64□□□□□ -2.31
SDS23P53172 SEC1YDR164C 2175 nt0.63□□□□□ -2.31
SDS23P53172 PRP16YKR086W 3216 nt0.63□□□□□ -2.31
SDS23P53172 HTL1YCR020W-B 237 nt0.63□□□□□ -2.31
SDS23P53172 RPL26BYGR034W 384 nt0.63□□□□□ -2.31
SDS23P53172 RPS27BYHR021C 249 nt0.63□□□□□ -2.31
SDS23P53172 YIL032CYIL032C 357 nt0.63□□□□□ -2.31
SDS23P53172 VIK1YPL253C 1944 nt0.63□□□□□ -2.31
SDS23P53172 YOR218CYOR218C 420 nt0.62□□□□□ -2.31
SDS23P53172 ASE1YOR058C 2658 nt0.61□□□□□ -2.31
SDS23P53172 NHP2YDL208W 471 nt0.61□□□□□ -2.31
SDS23P53172 YDR183C-AYDR183C-A 258 nt0.61□□□□□ -2.31
SDS23P53172 YFL032WYFL032W 321 nt0.61□□□□□ -2.31
SDS23P53172 CHS6YJL099W 2241 nt0.61□□□□□ -2.31
SDS23P53172 ATP6Q0085 780 nt0.6□□□□□ -2.31
SDS23P53172 YGL149WYGL149W 306 nt0.6□□□□□ -2.31
SDS23P53172 YMR193C-AYMR193C-A 387 nt0.6□□□□□ -2.31
SDS23P53172 CSE2YNR010W 450 nt0.6□□□□□ -2.31
SDS23P53172 YDR354C-AYDR354C-A 144 nt0.59□□□□□ -2.31
SDS23P53172 YDL185C-AYDL185C-A 228 nt0.58□□□□□ -2.32
SDS23P53172 YDR413CYDR413C 576 nt0.58□□□□□ -2.32
SDS23P53172 YFL063WYFL063W 456 nt0.58□□□□□ -2.32
SDS23P53172 YML002WYML002W 2214 nt0.58□□□□□ -2.32
SDS23P53172 YCR018C-AYCR018C-A 255 nt0.57□□□□□ -2.32
SDS23P53172 YKL118WYKL118W 312 nt0.57□□□□□ -2.32
SDS23P53172 YMR272W-AYMR272W-A 114 nt0.57□□□□□ -2.32
SDS23P53172 UTP10YJL109C 5310 nt0.56□□□□□ -2.32
SDS23P53172 UBP3YER151C 2739 nt0.56□□□□□ -2.32
SDS23P53172 YAL067W-AYAL067W-A 228 nt0.56□□□□□ -2.32
SDS23P53172 YPR159C-AYPR159C-A 102 nt0.56□□□□□ -2.32
SDS23P53172 PAM16YJL104W 450 nt0.55□□□□□ -2.32
SDS23P53172 YER097WYER097W 330 nt0.54□□□□□ -2.32
SDS23P53172 YMR031W-AYMR031W-A 327 nt0.54□□□□□ -2.32
SDS23P53172 YPR160W-AYPR160W-A 81 nt0.54□□□□□ -2.32
SDS23P53172 LTE1YAL024C 4308 nt0.54□□□□□ -2.32
SDS23P53172 SEC8YPR055W 3198 nt0.53□□□□□ -2.32
SDS23P53172 YJL026C-AYJL026C-A 222 nt0.53□□□□□ -2.32
SDS23P53172 YKL136WYKL136W 399 nt0.53□□□□□ -2.32
SDS23P53172 YNL028WYNL028W 318 nt0.53□□□□□ -2.32
SDS23P53172 snR190snR190 190 nt0.53□□□□□ -2.32
SDS23P53172 FYV10YIL097W 1551 nt0.53□□□□□ -2.33
SDS23P53172 COX5BYIL111W 456 nt0.52□□□□□ -2.33
SDS23P53172 YDR524W-CYDR524W-C 90 nt0.51□□□□□ -2.33
SDS23P53172 RPL39YJL189W 156 nt0.51□□□□□ -2.33
SDS23P53172 YMR307C-AYMR307C-A 195 nt0.51□□□□□ -2.33
SDS23P53172 STE5YDR103W 2754 nt0.51□□□□□ -2.33
SDS23P53172 STF2YGR008C 255 nt0.5□□□□□ -2.33
SDS23P53172 YJL197C-AYJL197C-A 282 nt0.5□□□□□ -2.33
SDS23P53172 YLL019W-AYLL019W-A 93 nt0.5□□□□□ -2.33
SDS23P53172 YLR399W-AYLR399W-A 105 nt0.5□□□□□ -2.33
SDS23P53172 PRP5YBR237W 2550 nt0.5□□□□□ -2.33
SDS23P53172 YIL134C-AYIL134C-A 204 nt0.49□□□□□ -2.33
SDS23P53172 YJL127W-AYJL127W-A 117 nt0.49□□□□□ -2.33
SDS23P53172 YOR015WYOR015W 360 nt0.49□□□□□ -2.33
SDS23P53172 COY1YKL179C 2040 nt0.48□□□□□ -2.33
SDS23P53172 YLR282CYLR282C 342 nt0.48□□□□□ -2.33
SDS23P53172 RAD61YDR014W 1944 nt0.47□□□□□ -2.33
SDS23P53172 OST4YDL232W 111 nt0.47□□□□□ -2.33
SDS23P53172 YEL020C-BYEL020C-B 198 nt0.47□□□□□ -2.33
SDS23P53172 YIL142C-AYIL142C-A 333 nt0.47□□□□□ -2.33
SDS23P53172 HUG1YML058W-A 207 nt0.47□□□□□ -2.33
SDS23P53172 tN(GUU)QtN(GUU)Q 71 nt0.46□□□□□ -2.34
SDS23P53172 tT(AGU)BtT(AGU)B 73 nt0.46□□□□□ -2.34
SDS23P53172 tT(AGU)CtT(AGU)C 73 nt0.46□□□□□ -2.34
SDS23P53172 tT(AGU)DtT(AGU)D 73 nt0.46□□□□□ -2.34
SDS23P53172 tT(AGU)HtT(AGU)H 73 nt0.46□□□□□ -2.34
SDS23P53172 tT(AGU)I1tT(AGU)I1 73 nt0.46□□□□□ -2.34
SDS23P53172 tT(AGU)I2tT(AGU)I2 73 nt0.46□□□□□ -2.34
SDS23P53172 tT(AGU)JtT(AGU)J 73 nt0.46□□□□□ -2.34
SDS23P53172 tT(AGU)N1tT(AGU)N1 73 nt0.46□□□□□ -2.34
SDS23P53172 tT(AGU)N2tT(AGU)N2 73 nt0.46□□□□□ -2.34
SDS23P53172 tT(AGU)O1tT(AGU)O1 73 nt0.46□□□□□ -2.34
SDS23P53172 tT(AGU)O2tT(AGU)O2 73 nt0.46□□□□□ -2.34
SDS23P53172 YLR120W-AYLR120W-A 102 nt0.46□□□□□ -2.34
SDS23P53172 PRP42YDR235W 1635 nt0.46□□□□□ -2.34
SDS23P53172 MYO1YHR023W 5787 nt0.45□□□□□ -2.34
SDS23P53172 YOR072W-BYOR072W-B 162 nt0.45□□□□□ -2.34
SDS23P53172 YOR161W-AYOR161W-A 81 nt0.45□□□□□ -2.34
SDS23P53172 YPR092WYPR092W 306 nt0.45□□□□□ -2.34
SDS23P53172 YOR192C-BYOR192C-B 5313 nt0.45□□□□□ -2.34
SDS23P53172 PET111YMR257C 2403 nt0.44□□□□□ -2.34
SDS23P53172 ULI1YFR026C 510 nt0.44□□□□□ -2.34
SDS23P53172 YGR069WYGR069W 336 nt0.44□□□□□ -2.34
SDS23P53172 YGL123C-AYGL123C-A 231 nt0.43□□□□□ -2.34
SDS23P53172 RPS30BYOR182C 192 nt0.43□□□□□ -2.34
SDS23P53172 YOR345CYOR345C 351 nt0.43□□□□□ -2.34
SDS23P53172 HAL9YOL089C 3093 nt0.43□□□□□ -2.34
SDS23P53172 snR74snR74 88 nt0.41□□□□□ -2.34
SDS23P53172 SBH1YER087C-B 249 nt0.41□□□□□ -2.34
SDS23P53172 YGL052WYGL052W 306 nt0.41□□□□□ -2.34
SDS23P53172 PAU12YGR294W 363 nt0.41□□□□□ -2.34
SDS23P53172 BLI1YKL061W 342 nt0.41□□□□□ -2.34
SDS23P53172 YMR172C-AYMR172C-A 384 nt0.4□□□□□ -2.35
SDS23P53172 YPR010C-AYPR010C-A 219 nt0.4□□□□□ -2.35
SDS23P53172 FMP27YLR454W 7887 nt0.4□□□□□ -2.35
Retrieved 100 of 7,029 protein–RNA pairs in 57.7 ms