Protein–RNA interactions for Protein: P47057

SNX4, Sorting nexin-4, yeastyeast

Predictions only

Length 423 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SNX4P47057 tT(AGU)N1tT(AGU)N1 73 nt0.51□□□□□ -2.33
SNX4P47057 tT(AGU)N2tT(AGU)N2 73 nt0.51□□□□□ -2.33
SNX4P47057 tT(AGU)O1tT(AGU)O1 73 nt0.51□□□□□ -2.33
SNX4P47057 tT(AGU)O2tT(AGU)O2 73 nt0.51□□□□□ -2.33
SNX4P47057 RPS25BYLR333C 327 nt0.51□□□□□ -2.33
SNX4P47057 ASE1YOR058C 2658 nt0.5□□□□□ -2.33
SNX4P47057 YFR012W-AYFR012W-A 87 nt0.5□□□□□ -2.33
SNX4P47057 YGR035CYGR035C 351 nt0.5□□□□□ -2.33
SNX4P47057 PAU12YGR294W 363 nt0.5□□□□□ -2.33
SNX4P47057 YJL120WYJL120W 324 nt0.5□□□□□ -2.33
SNX4P47057 BIL1YOR304C-A 231 nt0.5□□□□□ -2.33
SNX4P47057 NPR2YEL062W 1848 nt0.5□□□□□ -2.33
SNX4P47057 CHS6YJL099W 2241 nt0.49□□□□□ -2.33
SNX4P47057 YNL211CYNL211C 261 nt0.49□□□□□ -2.33
SNX4P47057 SPO21YOL091W 1830 nt0.48□□□□□ -2.33
SNX4P47057 YHR007C-AYHR007C-A 216 nt0.48□□□□□ -2.33
SNX4P47057 TAR1YLR154W-C 375 nt0.48□□□□□ -2.33
SNX4P47057 SGF11YPL047W 300 nt0.48□□□□□ -2.33
SNX4P47057 YPL225WYPL225W 441 nt0.48□□□□□ -2.33
SNX4P47057 LTE1YAL024C 4308 nt0.47□□□□□ -2.33
SNX4P47057 SSS1YDR086C 243 nt0.47□□□□□ -2.33
SNX4P47057 YDR118W-AYDR118W-A 117 nt0.47□□□□□ -2.33
SNX4P47057 YDR048CYDR048C 315 nt0.46□□□□□ -2.34
SNX4P47057 PAA1YDR071C 576 nt0.46□□□□□ -2.34
SNX4P47057 QCR9YGR183C 201 nt0.46□□□□□ -2.34
SNX4P47057 YAL063C-AYAL063C-A 291 nt0.46□□□□□ -2.34
SNX4P47057 YPR016W-AYPR016W-A 261 nt0.45□□□□□ -2.34
SNX4P47057 RPL26BYGR034W 384 nt0.44□□□□□ -2.34
SNX4P47057 YFL019CYFL019C 354 nt0.43□□□□□ -2.34
SNX4P47057 YIL115W-AYIL115W-A 372 nt0.43□□□□□ -2.34
SNX4P47057 FYV10YIL097W 1551 nt0.42□□□□□ -2.34
SNX4P47057 YKL145W-AYKL145W-A 93 nt0.42□□□□□ -2.34
SNX4P47057 YOL014WYOL014W 375 nt0.42□□□□□ -2.34
SNX4P47057 YHL046W-AYHL046W-A 327 nt0.41□□□□□ -2.34
SNX4P47057 YMR321CYMR321C 318 nt0.41□□□□□ -2.34
SNX4P47057 YOR218CYOR218C 420 nt0.41□□□□□ -2.34
SNX4P47057 COG8YML071C 1824 nt0.41□□□□□ -2.34
SNX4P47057 YDL185C-AYDL185C-A 228 nt0.4□□□□□ -2.35
SNX4P47057 YSP1YHR155W 3687 nt0.4□□□□□ -2.35
SNX4P47057 YIL134C-AYIL134C-A 204 nt0.39□□□□□ -2.35
SNX4P47057 YJL127W-AYJL127W-A 117 nt0.39□□□□□ -2.35
SNX4P47057 YPR160W-AYPR160W-A 81 nt0.39□□□□□ -2.35
SNX4P47057 SEC8YPR055W 3198 nt0.39□□□□□ -2.35
SNX4P47057 FMP27YLR454W 7887 nt0.38□□□□□ -2.35
SNX4P47057 YDR354C-AYDR354C-A 144 nt0.38□□□□□ -2.35
SNX4P47057 COX5BYIL111W 456 nt0.38□□□□□ -2.35
SNX4P47057 YPR170W-AYPR170W-A 186 nt0.38□□□□□ -2.35
SNX4P47057 PRP5YBR237W 2550 nt0.38□□□□□ -2.35
SNX4P47057 ULP2YIL031W 3105 nt0.37□□□□□ -2.35
SNX4P47057 RPS27BYHR021C 249 nt0.37□□□□□ -2.35
SNX4P47057 YAL067W-AYAL067W-A 228 nt0.37□□□□□ -2.35
SNX4P47057 YAF9YNL107W 681 nt0.37□□□□□ -2.35
SNX4P47057 YPR012WYPR012W 255 nt0.37□□□□□ -2.35
SNX4P47057 snR190snR190 190 nt0.37□□□□□ -2.35
SNX4P47057 BIR1YJR089W 2865 nt0.36□□□□□ -2.35
SNX4P47057 HAL9YOL089C 3093 nt0.36□□□□□ -2.35
SNX4P47057 YCR018C-AYCR018C-A 255 nt0.36□□□□□ -2.35
SNX4P47057 YDR102CYDR102C 333 nt0.36□□□□□ -2.35
SNX4P47057 OST4YDL232W 111 nt0.35□□□□□ -2.35
SNX4P47057 YLR399W-AYLR399W-A 105 nt0.35□□□□□ -2.35
SNX4P47057 AI1Q0050 2505 nt0.35□□□□□ -2.35
SNX4P47057 TRS65YGR166W 1683 nt0.34□□□□□ -2.35
SNX4P47057 snR60snR60 104 nt0.34□□□□□ -2.36
SNX4P47057 YMR307C-AYMR307C-A 195 nt0.34□□□□□ -2.36
SNX4P47057 YOR192C-BYOR192C-B 5313 nt0.34□□□□□ -2.36
SNX4P47057 VIK1YPL253C 1944 nt0.33□□□□□ -2.36
SNX4P47057 PRP42YDR235W 1635 nt0.33□□□□□ -2.36
SNX4P47057 PET111YMR257C 2403 nt0.33□□□□□ -2.36
SNX4P47057 HTL1YCR020W-B 237 nt0.32□□□□□ -2.36
SNX4P47057 SBH1YER087C-B 249 nt0.32□□□□□ -2.36
SNX4P47057 YJL026C-AYJL026C-A 222 nt0.32□□□□□ -2.36
SNX4P47057 YOR345CYOR345C 351 nt0.32□□□□□ -2.36
SNX4P47057 YPR197CYPR197C 564 nt0.32□□□□□ -2.36
SNX4P47057 tN(GUU)QtN(GUU)Q 71 nt0.31□□□□□ -2.36
SNX4P47057 YIL032CYIL032C 357 nt0.31□□□□□ -2.36
SNX4P47057 CSE2YNR010W 450 nt0.31□□□□□ -2.36
SNX4P47057 BEM3YPL115C 3387 nt0.31□□□□□ -2.36
SNX4P47057 YKL136WYKL136W 399 nt0.3□□□□□ -2.36
SNX4P47057 ABF2YMR072W 552 nt0.3□□□□□ -2.36
SNX4P47057 YLR282CYLR282C 342 nt0.29□□□□□ -2.36
SNX4P47057 YPL038W-AYPL038W-A 192 nt0.29□□□□□ -2.36
SNX4P47057 COY1YKL179C 2040 nt0.29□□□□□ -2.36
SNX4P47057 YDR183C-AYDR183C-A 258 nt0.28□□□□□ -2.36
SNX4P47057 ULI1YFR026C 510 nt0.28□□□□□ -2.36
SNX4P47057 YPR092WYPR092W 306 nt0.28□□□□□ -2.36
SNX4P47057 snR36snR36 182 nt0.28□□□□□ -2.36
SNX4P47057 IQG1YPL242C 4488 nt0.27□□□□□ -2.37
SNX4P47057 THO2YNL139C 4794 nt0.27□□□□□ -2.37
SNX4P47057 STE5YDR103W 2754 nt0.27□□□□□ -2.37
SNX4P47057 YLL019W-AYLL019W-A 93 nt0.26□□□□□ -2.37
SNX4P47057 YOR161W-AYOR161W-A 81 nt0.26□□□□□ -2.37
SNX4P47057 YBL100W-BYBL100W-B 5313 nt0.25□□□□□ -2.37
SNX4P47057 YCR022CYCR022C 345 nt0.25□□□□□ -2.37
SNX4P47057 YEL020C-BYEL020C-B 198 nt0.25□□□□□ -2.37
SNX4P47057 YFL063WYFL063W 456 nt0.25□□□□□ -2.37
SNX4P47057 YGL149WYGL149W 306 nt0.25□□□□□ -2.37
SNX4P47057 YJL197C-AYJL197C-A 282 nt0.25□□□□□ -2.37
SNX4P47057 YMR193C-AYMR193C-A 387 nt0.25□□□□□ -2.37
SNX4P47057 MLP1YKR095W 5628 nt0.24□□□□□ -2.37
SNX4P47057 YDL240C-AYDL240C-A 138 nt0.24□□□□□ -2.37
Retrieved 100 of 7,029 protein–RNA pairs in 110.9 ms