Protein–RNA interactions for Protein: P40548

SNL1, HSP70 co-chaperone SNL1, yeastyeast

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SNL1P40548 NPR2YEL062W 1848 nt0.66□□□□□ -2.3
SNL1P40548 COG8YML071C 1824 nt0.66□□□□□ -2.3
SNL1P40548 YMR031W-AYMR031W-A 327 nt0.66□□□□□ -2.3
SNL1P40548 YAF9YNL107W 681 nt0.66□□□□□ -2.3
SNL1P40548 YPR197CYPR197C 564 nt0.66□□□□□ -2.3
SNL1P40548 INA22YIR024C 651 nt0.65□□□□□ -2.31
SNL1P40548 SGF11YPL047W 300 nt0.65□□□□□ -2.31
SNL1P40548 BEM3YPL115C 3387 nt0.64□□□□□ -2.31
SNL1P40548 YDR183C-AYDR183C-A 258 nt0.64□□□□□ -2.31
SNL1P40548 SEC8YPR055W 3198 nt0.64□□□□□ -2.31
SNL1P40548 FYV10YIL097W 1551 nt0.63□□□□□ -2.31
SNL1P40548 RPS27BYHR021C 249 nt0.63□□□□□ -2.31
SNL1P40548 YPR160W-AYPR160W-A 81 nt0.63□□□□□ -2.31
SNL1P40548 YSP1YHR155W 3687 nt0.62□□□□□ -2.31
SNL1P40548 tT(AGU)BtT(AGU)B 73 nt0.62□□□□□ -2.31
SNL1P40548 tT(AGU)CtT(AGU)C 73 nt0.62□□□□□ -2.31
SNL1P40548 tT(AGU)DtT(AGU)D 73 nt0.62□□□□□ -2.31
SNL1P40548 tT(AGU)HtT(AGU)H 73 nt0.62□□□□□ -2.31
SNL1P40548 tT(AGU)I1tT(AGU)I1 73 nt0.62□□□□□ -2.31
SNL1P40548 tT(AGU)I2tT(AGU)I2 73 nt0.62□□□□□ -2.31
SNL1P40548 tT(AGU)JtT(AGU)J 73 nt0.62□□□□□ -2.31
SNL1P40548 tT(AGU)N1tT(AGU)N1 73 nt0.62□□□□□ -2.31
SNL1P40548 tT(AGU)N2tT(AGU)N2 73 nt0.62□□□□□ -2.31
SNL1P40548 tT(AGU)O1tT(AGU)O1 73 nt0.62□□□□□ -2.31
SNL1P40548 tT(AGU)O2tT(AGU)O2 73 nt0.62□□□□□ -2.31
SNL1P40548 YOR218CYOR218C 420 nt0.62□□□□□ -2.31
SNL1P40548 YAL067W-AYAL067W-A 228 nt0.61□□□□□ -2.31
SNL1P40548 YPL038W-AYPL038W-A 192 nt0.61□□□□□ -2.31
SNL1P40548 YPR159C-AYPR159C-A 102 nt0.61□□□□□ -2.31
SNL1P40548 YDL185C-AYDL185C-A 228 nt0.6□□□□□ -2.31
SNL1P40548 ATP6Q0085 780 nt0.6□□□□□ -2.31
SNL1P40548 YLR399W-AYLR399W-A 105 nt0.6□□□□□ -2.31
SNL1P40548 PRP5YBR237W 2550 nt0.6□□□□□ -2.31
SNL1P40548 YDL240C-AYDL240C-A 138 nt0.59□□□□□ -2.31
SNL1P40548 YJL026C-AYJL026C-A 222 nt0.59□□□□□ -2.31
SNL1P40548 YML002WYML002W 2214 nt0.58□□□□□ -2.32
SNL1P40548 VIK1YPL253C 1944 nt0.58□□□□□ -2.32
SNL1P40548 ANS1YHR126C 480 nt0.57□□□□□ -2.32
SNL1P40548 IQG1YPL242C 4488 nt0.56□□□□□ -2.32
SNL1P40548 YDR354C-AYDR354C-A 144 nt0.56□□□□□ -2.32
SNL1P40548 YFL063WYFL063W 456 nt0.56□□□□□ -2.32
SNL1P40548 YMR307C-AYMR307C-A 195 nt0.56□□□□□ -2.32
SNL1P40548 YIL032CYIL032C 357 nt0.55□□□□□ -2.32
SNL1P40548 CSE2YNR010W 450 nt0.55□□□□□ -2.32
SNL1P40548 snR190snR190 190 nt0.55□□□□□ -2.32
SNL1P40548 snR60snR60 104 nt0.54□□□□□ -2.32
SNL1P40548 OST4YDL232W 111 nt0.54□□□□□ -2.32
SNL1P40548 YIL142C-AYIL142C-A 333 nt0.54□□□□□ -2.32
SNL1P40548 COX5BYIL111W 456 nt0.53□□□□□ -2.32
SNL1P40548 YJL127W-AYJL127W-A 117 nt0.53□□□□□ -2.32
SNL1P40548 UBP3YER151C 2739 nt0.52□□□□□ -2.33
SNL1P40548 snR36snR36 182 nt0.52□□□□□ -2.33
SNL1P40548 UTP10YJL109C 5310 nt0.52□□□□□ -2.33
SNL1P40548 YCR018C-AYCR018C-A 255 nt0.51□□□□□ -2.33
SNL1P40548 YIL134C-AYIL134C-A 204 nt0.51□□□□□ -2.33
SNL1P40548 YMR193C-AYMR193C-A 387 nt0.51□□□□□ -2.33
SNL1P40548 PRP42YDR235W 1635 nt0.5□□□□□ -2.33
SNL1P40548 HMRA1YCR097W 381 nt0.5□□□□□ -2.33
SNL1P40548 GIM4YEL003W 336 nt0.5□□□□□ -2.33
SNL1P40548 YGL149WYGL149W 306 nt0.5□□□□□ -2.33
SNL1P40548 YEL020C-BYEL020C-B 198 nt0.49□□□□□ -2.33
SNL1P40548 YJL197C-AYJL197C-A 282 nt0.48□□□□□ -2.33
SNL1P40548 YCR022CYCR022C 345 nt0.47□□□□□ -2.33
SNL1P40548 YFL032WYFL032W 321 nt0.47□□□□□ -2.33
SNL1P40548 YKL118WYKL118W 312 nt0.47□□□□□ -2.33
SNL1P40548 YLR282CYLR282C 342 nt0.47□□□□□ -2.33
SNL1P40548 YNL028WYNL028W 318 nt0.47□□□□□ -2.33
SNL1P40548 YOR345CYOR345C 351 nt0.47□□□□□ -2.33
SNL1P40548 YHR175W-AYHR175W-A 150 nt0.46□□□□□ -2.34
SNL1P40548 PAM16YJL104W 450 nt0.46□□□□□ -2.34
SNL1P40548 RPL39YJL189W 156 nt0.46□□□□□ -2.34
SNL1P40548 YKL136WYKL136W 399 nt0.46□□□□□ -2.34
SNL1P40548 MLP1YKR095W 5628 nt0.46□□□□□ -2.34
SNL1P40548 snR56snR56 88 nt0.45□□□□□ -2.34
SNL1P40548 YER097WYER097W 330 nt0.45□□□□□ -2.34
SNL1P40548 PAU12YGR294W 363 nt0.45□□□□□ -2.34
SNL1P40548 PET111YMR257C 2403 nt0.45□□□□□ -2.34
SNL1P40548 ULI1YFR026C 510 nt0.44□□□□□ -2.34
SNL1P40548 tN(GUU)QtN(GUU)Q 71 nt0.44□□□□□ -2.34
SNL1P40548 YOR015WYOR015W 360 nt0.44□□□□□ -2.34
SNL1P40548 FMP27YLR454W 7887 nt0.43□□□□□ -2.34
SNL1P40548 YLR041WYLR041W 321 nt0.43□□□□□ -2.34
SNL1P40548 YLR120W-AYLR120W-A 102 nt0.43□□□□□ -2.34
SNL1P40548 COY1YKL179C 2040 nt0.43□□□□□ -2.34
SNL1P40548 STE5YDR103W 2754 nt0.42□□□□□ -2.34
SNL1P40548 YDR413CYDR413C 576 nt0.42□□□□□ -2.34
SNL1P40548 SBH1YER087C-B 249 nt0.42□□□□□ -2.34
SNL1P40548 YGR069WYGR069W 336 nt0.42□□□□□ -2.34
SNL1P40548 tR(ACG)Q2tR(ACG)Q2 74 nt0.41□□□□□ -2.34
SNL1P40548 YLL019W-AYLL019W-A 93 nt0.41□□□□□ -2.34
SNL1P40548 MLP2YIL149C 5040 nt0.41□□□□□ -2.34
SNL1P40548 ABF2YMR072W 552 nt0.4□□□□□ -2.35
SNL1P40548 YGL123C-AYGL123C-A 231 nt0.39□□□□□ -2.35
SNL1P40548 YOR161W-AYOR161W-A 81 nt0.39□□□□□ -2.35
SNL1P40548 YPR092WYPR092W 306 nt0.39□□□□□ -2.35
SNL1P40548 BLI1YKL061W 342 nt0.38□□□□□ -2.35
SNL1P40548 YKL100W-AYKL100W-A 90 nt0.38□□□□□ -2.35
SNL1P40548 ESP1YGR098C 4893 nt0.38□□□□□ -2.35
SNL1P40548 YOR192C-BYOR192C-B 5313 nt0.36□□□□□ -2.35
SNL1P40548 YMR172C-AYMR172C-A 384 nt0.36□□□□□ -2.35
Retrieved 100 of 7,029 protein–RNA pairs in 68.1 ms