Protein–RNA interactions for Protein: P40046

VTC1, Vacuolar transporter chaperone 1, yeastyeast

RIP-Chip data

Length 129 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VTC1P40046 tT(AGU)N1tT(AGU)N1 73 nt0.42□□□□□ -2.34
VTC1P40046 tT(AGU)N2tT(AGU)N2 73 nt0.42□□□□□ -2.34
VTC1P40046 tT(AGU)O1tT(AGU)O1 73 nt0.42□□□□□ -2.34
VTC1P40046 tT(AGU)O2tT(AGU)O2 73 nt0.42□□□□□ -2.34
VTC1P40046 YPL044CYPL044C 549 nt0.42□□□□□ -2.34
VTC1P40046 SGF11YPL047W 300 nt0.42□□□□□ -2.34
VTC1P40046 YIL142C-AYIL142C-A 333 nt0.41□□□□□ -2.34
VTC1P40046 HTB2YBL002W 396 nt0.41□□□□□ -2.34
VTC1P40046 PRP5YBR237W 2550 nt0.41□□□□□ -2.34
VTC1P40046 YPR016W-AYPR016W-A 261 nt0.4□□□□□ -2.35
VTC1P40046 YGR035CYGR035C 351 nt0.39□□□□□ -2.35
VTC1P40046 ESP1YGR098C 4893 nt0.39□□□□□ -2.35 RIP-Chip
VTC1P40046 COG8YML071C 1824 nt0.38□□□□□ -2.35
VTC1P40046 FMP27YLR454W 7887 nt0.38□□□□□ -2.35
VTC1P40046 HAL9YOL089C 3093 nt0.38□□□□□ -2.35
VTC1P40046 HMRA2YCR096C 360 nt0.38□□□□□ -2.35
VTC1P40046 YDR157WYDR157W 402 nt0.38□□□□□ -2.35
VTC1P40046 YDR048CYDR048C 315 nt0.37□□□□□ -2.35
VTC1P40046 YPR160W-AYPR160W-A 81 nt0.37□□□□□ -2.35
VTC1P40046 YDR354C-AYDR354C-A 144 nt0.36□□□□□ -2.35
VTC1P40046 RPL26BYGR034W 384 nt0.36□□□□□ -2.35
VTC1P40046 YHL046W-AYHL046W-A 327 nt0.36□□□□□ -2.35
VTC1P40046 YOR345CYOR345C 351 nt0.36□□□□□ -2.35
VTC1P40046 YMR160WYMR160W 2451 nt0.36□□□□□ -2.35
VTC1P40046 YOR029WYOR029W 336 nt0.35□□□□□ -2.35
VTC1P40046 YOR192C-BYOR192C-B 5313 nt0.35□□□□□ -2.35
VTC1P40046 OST4YDL232W 111 nt0.34□□□□□ -2.36
VTC1P40046 tN(GUU)QtN(GUU)Q 71 nt0.34□□□□□ -2.36
VTC1P40046 YIL134C-AYIL134C-A 204 nt0.34□□□□□ -2.36
VTC1P40046 YJL026C-AYJL026C-A 222 nt0.34□□□□□ -2.36
VTC1P40046 YJL127W-AYJL127W-A 117 nt0.34□□□□□ -2.36
VTC1P40046 ABF2YMR072W 552 nt0.34□□□□□ -2.36
VTC1P40046 PAA1YDR071C 576 nt0.33□□□□□ -2.36
VTC1P40046 PAU12YGR294W 363 nt0.33□□□□□ -2.36
VTC1P40046 YAF9YNL107W 681 nt0.33□□□□□ -2.36
VTC1P40046 BIL1YOR304C-A 231 nt0.33□□□□□ -2.36
VTC1P40046 YDR102CYDR102C 333 nt0.32□□□□□ -2.36
VTC1P40046 YFL019CYFL019C 354 nt0.32□□□□□ -2.36
VTC1P40046 YAL067W-AYAL067W-A 228 nt0.32□□□□□ -2.36
VTC1P40046 snR190snR190 190 nt0.32□□□□□ -2.36
VTC1P40046 COX5BYIL111W 456 nt0.31□□□□□ -2.36
VTC1P40046 YMR321CYMR321C 318 nt0.31□□□□□ -2.36
VTC1P40046 YOR218CYOR218C 420 nt0.31□□□□□ -2.36
VTC1P40046 SEC8YPR055W 3198 nt0.31□□□□□ -2.36
VTC1P40046 ULI1YFR026C 510 nt0.3□□□□□ -2.36
VTC1P40046 PRP42YDR235W 1635 nt0.29□□□□□ -2.36 RIP-Chip
VTC1P40046 SBH1YER087C-B 249 nt0.28□□□□□ -2.36
VTC1P40046 YOR015WYOR015W 360 nt0.28□□□□□ -2.36
VTC1P40046 BUL2YML111W 2763 nt0.28□□□□□ -2.37
VTC1P40046 BEM3YPL115C 3387 nt0.27□□□□□ -2.37
VTC1P40046 RPS27BYHR021C 249 nt0.27□□□□□ -2.37
VTC1P40046 YAL063C-AYAL063C-A 291 nt0.27□□□□□ -2.37
VTC1P40046 YLR399W-AYLR399W-A 105 nt0.27□□□□□ -2.37
VTC1P40046 YPR012WYPR012W 255 nt0.27□□□□□ -2.37
VTC1P40046 YPR092WYPR092W 306 nt0.27□□□□□ -2.37
VTC1P40046 HTL1YCR020W-B 237 nt0.26□□□□□ -2.37
VTC1P40046 YCR022CYCR022C 345 nt0.26□□□□□ -2.37
VTC1P40046 YGR069WYGR069W 336 nt0.26□□□□□ -2.37
VTC1P40046 YOR161W-AYOR161W-A 81 nt0.26□□□□□ -2.37
VTC1P40046 ORC3YLL004W 1851 nt0.26□□□□□ -2.37
VTC1P40046 VIK1YPL253C 1944 nt0.26□□□□□ -2.37
VTC1P40046 COY1YKL179C 2040 nt0.26□□□□□ -2.37
VTC1P40046 YCR018C-AYCR018C-A 255 nt0.25□□□□□ -2.37
VTC1P40046 snR60snR60 104 nt0.25□□□□□ -2.37
VTC1P40046 YLR282CYLR282C 342 nt0.25□□□□□ -2.37
VTC1P40046 YMR307C-AYMR307C-A 195 nt0.25□□□□□ -2.37
VTC1P40046 RPS30BYOR182C 192 nt0.25□□□□□ -2.37
VTC1P40046 PET111YMR257C 2403 nt0.25□□□□□ -2.37
VTC1P40046 YBL100W-BYBL100W-B 5313 nt0.25□□□□□ -2.37
VTC1P40046 YDR371C-AYDR371C-A 105 nt0.24□□□□□ -2.37
VTC1P40046 UTP20YBL004W 7482 nt0.24□□□□□ -2.37
VTC1P40046 RCO1YMR075W 2055 nt0.23□□□□□ -2.37
VTC1P40046 YDR183C-AYDR183C-A 258 nt0.23□□□□□ -2.37
VTC1P40046 RPS26AYGL189C 360 nt0.23□□□□□ -2.37
VTC1P40046 STF2YGR008C 255 nt0.23□□□□□ -2.37
VTC1P40046 YLR041WYLR041W 321 nt0.23□□□□□ -2.37
VTC1P40046 YFL063WYFL063W 456 nt0.22□□□□□ -2.37
VTC1P40046 YIL032CYIL032C 357 nt0.22□□□□□ -2.37
VTC1P40046 ULP2YIL031W 3105 nt0.21□□□□□ -2.38
VTC1P40046 YKL136WYKL136W 399 nt0.21□□□□□ -2.38
VTC1P40046 YLL019W-AYLL019W-A 93 nt0.21□□□□□ -2.38
VTC1P40046 YPR170W-AYPR170W-A 186 nt0.21□□□□□ -2.38
VTC1P40046 IQG1YPL242C 4488 nt0.21□□□□□ -2.38
VTC1P40046 YNL146WYNL146W 303 nt0.2□□□□□ -2.38
VTC1P40046 CSE2YNR010W 450 nt0.2□□□□□ -2.38
VTC1P40046 MLP1YKR095W 5628 nt0.2□□□□□ -2.38
VTC1P40046 ATP6Q0085 780 nt0.19□□□□□ -2.38
VTC1P40046 YEL020C-BYEL020C-B 198 nt0.19□□□□□ -2.38
VTC1P40046 YKL145W-AYKL145W-A 93 nt0.19□□□□□ -2.38
VTC1P40046 YPR197CYPR197C 564 nt0.19□□□□□ -2.38
VTC1P40046 NIP1YMR309C 2439 nt0.19□□□□□ -2.38
VTC1P40046 NNF2YGR089W 2811 nt0.19□□□□□ -2.38 RIP-Chip
VTC1P40046 YGL123C-AYGL123C-A 231 nt0.18□□□□□ -2.38
VTC1P40046 YJL197C-AYJL197C-A 282 nt0.18□□□□□ -2.38
VTC1P40046 snR36snR36 182 nt0.18□□□□□ -2.38
VTC1P40046 snR74snR74 88 nt0.17□□□□□ -2.38
VTC1P40046 YFL032WYFL032W 321 nt0.17□□□□□ -2.38
VTC1P40046 YLR120W-AYLR120W-A 102 nt0.17□□□□□ -2.38
VTC1P40046 HUG1YML058W-A 207 nt0.17□□□□□ -2.38
VTC1P40046 COX12YLR038C 252 nt0.16□□□□□ -2.38
Retrieved 100 of 7,029 protein–RNA pairs in 75.2 ms