Protein–RNA interactions for Protein: P39682

PRP39, Pre-mRNA-processing factor 39, yeastyeast

Known RBP Predictions only

Length 629 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
PRP39P39682 tF(GAA)FtF(GAA)F 73 nt0.64□□□□□ -2.31
PRP39P39682 tF(GAA)GtF(GAA)G 73 nt0.64□□□□□ -2.31
PRP39P39682 tF(GAA)H1tF(GAA)H1 73 nt0.64□□□□□ -2.31
PRP39P39682 tF(GAA)H2tF(GAA)H2 73 nt0.64□□□□□ -2.31
PRP39P39682 tF(GAA)MtF(GAA)M 73 nt0.64□□□□□ -2.31
PRP39P39682 tF(GAA)P1tF(GAA)P1 73 nt0.64□□□□□ -2.31
PRP39P39682 tF(GAA)P2tF(GAA)P2 73 nt0.64□□□□□ -2.31
PRP39P39682 tW(UCA)QtW(UCA)Q 74 nt0.64□□□□□ -2.31
PRP39P39682 NPR2YEL062W 1848 nt0.64□□□□□ -2.31
PRP39P39682 RPL26BYGR034W 384 nt0.63□□□□□ -2.31
PRP39P39682 ASE1YOR058C 2658 nt0.63□□□□□ -2.31
PRP39P39682 LTE1YAL024C 4308 nt0.62□□□□□ -2.31
PRP39P39682 YMR272W-AYMR272W-A 114 nt0.62□□□□□ -2.31
PRP39P39682 YPL225WYPL225W 441 nt0.62□□□□□ -2.31
PRP39P39682 YHR007C-AYHR007C-A 216 nt0.61□□□□□ -2.31
PRP39P39682 YMR031W-AYMR031W-A 327 nt0.61□□□□□ -2.31
PRP39P39682 YNL211CYNL211C 261 nt0.61□□□□□ -2.31
PRP39P39682 TAR1YLR154W-C 375 nt0.6□□□□□ -2.31
PRP39P39682 YOR218CYOR218C 420 nt0.6□□□□□ -2.31
PRP39P39682 YMR321CYMR321C 318 nt0.59□□□□□ -2.31
PRP39P39682 YFR012W-AYFR012W-A 87 nt0.58□□□□□ -2.32
PRP39P39682 YHL046W-AYHL046W-A 327 nt0.57□□□□□ -2.32
PRP39P39682 SGF11YPL047W 300 nt0.57□□□□□ -2.32
PRP39P39682 SEC8YPR055W 3198 nt0.57□□□□□ -2.32
PRP39P39682 YML002WYML002W 2214 nt0.56□□□□□ -2.32
PRP39P39682 YDR118W-AYDR118W-A 117 nt0.56□□□□□ -2.32
PRP39P39682 FYV10YIL097W 1551 nt0.56□□□□□ -2.32
PRP39P39682 YFL019CYFL019C 354 nt0.55□□□□□ -2.32
PRP39P39682 YPR160W-AYPR160W-A 81 nt0.55□□□□□ -2.32
PRP39P39682 UTP10YJL109C 5310 nt0.55□□□□□ -2.32
PRP39P39682 YDR048CYDR048C 315 nt0.54□□□□□ -2.32
PRP39P39682 SSS1YDR086C 243 nt0.54□□□□□ -2.32
PRP39P39682 QCR9YGR183C 201 nt0.54□□□□□ -2.32
PRP39P39682 PAU12YGR294W 363 nt0.54□□□□□ -2.32
PRP39P39682 HAL9YOL089C 3093 nt0.53□□□□□ -2.32
PRP39P39682 YLR399W-AYLR399W-A 105 nt0.53□□□□□ -2.32
PRP39P39682 BEM3YPL115C 3387 nt0.53□□□□□ -2.33
PRP39P39682 ULP2YIL031W 3105 nt0.51□□□□□ -2.33
PRP39P39682 YIL115W-AYIL115W-A 372 nt0.51□□□□□ -2.33
PRP39P39682 YIL134C-AYIL134C-A 204 nt0.51□□□□□ -2.33
PRP39P39682 YKL145W-AYKL145W-A 93 nt0.51□□□□□ -2.33
PRP39P39682 YPR016W-AYPR016W-A 261 nt0.51□□□□□ -2.33
PRP39P39682 COG8YML071C 1824 nt0.5□□□□□ -2.33
PRP39P39682 PRP5YBR237W 2550 nt0.5□□□□□ -2.33
PRP39P39682 YJL127W-AYJL127W-A 117 nt0.5□□□□□ -2.33
PRP39P39682 YAL067W-AYAL067W-A 228 nt0.5□□□□□ -2.33
PRP39P39682 COX5BYIL111W 456 nt0.49□□□□□ -2.33
PRP39P39682 YDL185C-AYDL185C-A 228 nt0.48□□□□□ -2.33
PRP39P39682 RPS27BYHR021C 249 nt0.48□□□□□ -2.33
PRP39P39682 YPR012WYPR012W 255 nt0.48□□□□□ -2.33
PRP39P39682 YPR170W-AYPR170W-A 186 nt0.48□□□□□ -2.33
PRP39P39682 YSP1YHR155W 3687 nt0.48□□□□□ -2.33
PRP39P39682 FMP27YLR454W 7887 nt0.47□□□□□ -2.33
PRP39P39682 OST4YDL232W 111 nt0.47□□□□□ -2.33
PRP39P39682 YMR307C-AYMR307C-A 195 nt0.47□□□□□ -2.33
PRP39P39682 YOL014WYOL014W 375 nt0.47□□□□□ -2.33
PRP39P39682 snR190snR190 190 nt0.47□□□□□ -2.33
PRP39P39682 YCR018C-AYCR018C-A 255 nt0.45□□□□□ -2.34
PRP39P39682 CSE2YNR010W 450 nt0.45□□□□□ -2.34
PRP39P39682 PRP42YDR235W 1635 nt0.45□□□□□ -2.34
PRP39P39682 PET111YMR257C 2403 nt0.44□□□□□ -2.34
PRP39P39682 HTL1YCR020W-B 237 nt0.44□□□□□ -2.34
PRP39P39682 YJL026C-AYJL026C-A 222 nt0.44□□□□□ -2.34
PRP39P39682 YDR102CYDR102C 333 nt0.43□□□□□ -2.34
PRP39P39682 YDR354C-AYDR354C-A 144 nt0.43□□□□□ -2.34
PRP39P39682 AI1Q0050 2505 nt0.43□□□□□ -2.34
PRP39P39682 MLP1YKR095W 5628 nt0.42□□□□□ -2.34
PRP39P39682 YAF9YNL107W 681 nt0.42□□□□□ -2.34
PRP39P39682 VIK1YPL253C 1944 nt0.42□□□□□ -2.34
PRP39P39682 TRS65YGR166W 1683 nt0.4□□□□□ -2.34
PRP39P39682 SBH1YER087C-B 249 nt0.4□□□□□ -2.35
PRP39P39682 YPL038W-AYPL038W-A 192 nt0.4□□□□□ -2.35
PRP39P39682 IQG1YPL242C 4488 nt0.4□□□□□ -2.35
PRP39P39682 YKL136WYKL136W 399 nt0.39□□□□□ -2.35
PRP39P39682 YPR197CYPR197C 564 nt0.39□□□□□ -2.35
PRP39P39682 snR60snR60 104 nt0.38□□□□□ -2.35
PRP39P39682 YEL020C-BYEL020C-B 198 nt0.38□□□□□ -2.35
PRP39P39682 YLR282CYLR282C 342 nt0.38□□□□□ -2.35
PRP39P39682 YOR345CYOR345C 351 nt0.38□□□□□ -2.35
PRP39P39682 YDR183C-AYDR183C-A 258 nt0.37□□□□□ -2.35
PRP39P39682 YIL032CYIL032C 357 nt0.37□□□□□ -2.35
PRP39P39682 YOR192C-BYOR192C-B 5313 nt0.37□□□□□ -2.35
PRP39P39682 tN(GUU)QtN(GUU)Q 71 nt0.36□□□□□ -2.35
PRP39P39682 YCR022CYCR022C 345 nt0.35□□□□□ -2.35
PRP39P39682 ABF2YMR072W 552 nt0.35□□□□□ -2.35
PRP39P39682 BIR1YJR089W 2865 nt0.34□□□□□ -2.36
PRP39P39682 MLP2YIL149C 5040 nt0.33□□□□□ -2.36
PRP39P39682 COY1YKL179C 2040 nt0.33□□□□□ -2.36
PRP39P39682 ULI1YFR026C 510 nt0.33□□□□□ -2.36
PRP39P39682 YJL197C-AYJL197C-A 282 nt0.33□□□□□ -2.36
PRP39P39682 ATP6Q0085 780 nt0.31□□□□□ -2.36
PRP39P39682 YMR193C-AYMR193C-A 387 nt0.31□□□□□ -2.36
PRP39P39682 YPR092WYPR092W 306 nt0.31□□□□□ -2.36
PRP39P39682 NNF2YGR089W 2811 nt0.31□□□□□ -2.36
PRP39P39682 YDL240C-AYDL240C-A 138 nt0.3□□□□□ -2.36
PRP39P39682 YFL063WYFL063W 456 nt0.3□□□□□ -2.36
PRP39P39682 YGL149WYGL149W 306 nt0.3□□□□□ -2.36
PRP39P39682 snR36snR36 182 nt0.3□□□□□ -2.36
PRP39P39682 MYO1YHR023W 5787 nt0.3□□□□□ -2.36
PRP39P39682 STE5YDR103W 2754 nt0.29□□□□□ -2.36
Retrieved 100 of 7,029 protein–RNA pairs in 68.8 ms