Protein–RNA interactions for Protein: P38861

NMD3, 60S ribosomal export protein NMD3, yeastyeast

Known RBP Predictions only

Length 518 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
NMD3P38861 UTP22YGR090W 3714 nt2.23□□□□□ -2.05
NMD3P38861 IRC20YLR247C 4671 nt2.23□□□□□ -2.05
NMD3P38861 IRE1YHR079C 3348 nt2.22□□□□□ -2.05
NMD3P38861 YMR175W-AYMR175W-A 195 nt2.22□□□□□ -2.05
NMD3P38861 SAC3YDR159W 3906 nt2.22□□□□□ -2.05
NMD3P38861 COG4YPR105C 2586 nt2.21□□□□□ -2.06
NMD3P38861 CHS6YJL099W 2241 nt2.21□□□□□ -2.06
NMD3P38861 YHR214C-BYHR214C-B 5382 nt2.21□□□□□ -2.06
NMD3P38861 MSH6YDR097C 3729 nt2.2□□□□□ -2.06
NMD3P38861 ADR1YDR216W 3972 nt2.2□□□□□ -2.06
NMD3P38861 YJL052C-AYJL052C-A 120 nt2.2□□□□□ -2.06
NMD3P38861 RPL37BYDR500C 267 nt2.19□□□□□ -2.06
NMD3P38861 SOM1YEL059C-A 225 nt2.19□□□□□ -2.06
NMD3P38861 YDL206WYDL206W 2289 nt2.19□□□□□ -2.06
NMD3P38861 YCR087C-AYCR087C-A 462 nt2.18□□□□□ -2.06
NMD3P38861 FRK1YPL141C 2598 nt2.17□□□□□ -2.06
NMD3P38861 YLL020CYLL020C 306 nt2.17□□□□□ -2.06
NMD3P38861 GYP5YPL249C 2685 nt2.16□□□□□ -2.06
NMD3P38861 SEY1YOR165W 2331 nt2.16□□□□□ -2.06
NMD3P38861 YKL100W-AYKL100W-A 90 nt2.16□□□□□ -2.06
NMD3P38861 UFD4YKL010C 4452 nt2.16□□□□□ -2.06
NMD3P38861 YLR419WYLR419W 4308 nt2.15□□□□□ -2.06
NMD3P38861 YDL118WYDL118W 381 nt2.15□□□□□ -2.07
NMD3P38861 YAL067W-AYAL067W-A 228 nt2.15□□□□□ -2.07
NMD3P38861 DGR1YNL130C-A 147 nt2.15□□□□□ -2.07
NMD3P38861 YNL144CYNL144C 2223 nt2.15□□□□□ -2.07
NMD3P38861 HIR3YJR140C 4947 nt2.14□□□□□ -2.07
NMD3P38861 YGL182CYGL182C 324 nt2.13□□□□□ -2.07
NMD3P38861 UFD2YDL190C 2886 nt2.12□□□□□ -2.07
NMD3P38861 POL5YEL055C 3069 nt2.12□□□□□ -2.07
NMD3P38861 UTP8YGR128C 2142 nt2.12□□□□□ -2.07
NMD3P38861 LHS1YKL073W 2646 nt2.12□□□□□ -2.07
NMD3P38861 TBS1YBR150C 3285 nt2.11□□□□□ -2.07
NMD3P38861 RPM2YML091C 3609 nt2.11□□□□□ -2.07
NMD3P38861 NEO1YIL048W 3456 nt2.11□□□□□ -2.07
NMD3P38861 PAN2YGL094C 3348 nt2.11□□□□□ -2.07
NMD3P38861 NUT1YGL151W 3399 nt2.11□□□□□ -2.07
NMD3P38861 BRE1YDL074C 2103 nt2.11□□□□□ -2.07
NMD3P38861 YLL054CYLL054C 2532 nt2.11□□□□□ -2.07
NMD3P38861 ALY2YJL084C 3141 nt2.11□□□□□ -2.07
NMD3P38861 YOR093CYOR093C 4947 nt2.1□□□□□ -2.07
NMD3P38861 YGR109W-BYGR109W-B 4644 nt2.1□□□□□ -2.07
NMD3P38861 MYO4YAL029C 4416 nt2.1□□□□□ -2.07
NMD3P38861 SFB2YNL049C 2631 nt2.1□□□□□ -2.07
NMD3P38861 ROM2YLR371W 4071 nt2.1□□□□□ -2.07
NMD3P38861 SPP41YDR464W 4308 nt2.1□□□□□ -2.07
NMD3P38861 SEC63YOR254C 1992 nt2.1□□□□□ -2.07
NMD3P38861 YCS4YLR272C 3531 nt2.09□□□□□ -2.07
NMD3P38861 RSM22YKL155C 1887 nt2.09□□□□□ -2.08
NMD3P38861 FAB1YFR019W 6837 nt2.08□□□□□ -2.08
NMD3P38861 BFR2YDR299W 1605 nt2.08□□□□□ -2.08
NMD3P38861 SEC31YDL195W 3822 nt2.07□□□□□ -2.08
NMD3P38861 YGL041C-BYGL041C-B 183 nt2.07□□□□□ -2.08
NMD3P38861 YGL123C-AYGL123C-A 231 nt2.07□□□□□ -2.08
NMD3P38861 YMR247W-AYMR247W-A 144 nt2.07□□□□□ -2.08
NMD3P38861 MYO2YOR326W 4725 nt2.07□□□□□ -2.08
NMD3P38861 FKS1YLR342W 5631 nt2.06□□□□□ -2.08
NMD3P38861 PKH3YDR466W 2697 nt2.05□□□□□ -2.08
NMD3P38861 UTP21YLR409C 2820 nt2.05□□□□□ -2.08
NMD3P38861 COX5BYIL111W 456 nt2.05□□□□□ -2.08
NMD3P38861 SPO24YPR036W-A 204 nt2.05□□□□□ -2.08
NMD3P38861 CDC25YLR310C 4770 nt2.04□□□□□ -2.08
NMD3P38861 tT(UGU)HtT(UGU)H 72 nt2.03□□□□□ -2.08
NMD3P38861 YBL039C-AYBL039C-A 84 nt2.03□□□□□ -2.08
NMD3P38861 STB6YKL072W 2301 nt2.02□□□□□ -2.09
NMD3P38861 YLR422WYLR422W 5799 nt2.02□□□□□ -2.09
NMD3P38861 EMC5YIL027C 426 nt2.02□□□□□ -2.09
NMD3P38861 MMS4YBR098W 2076 nt2.02□□□□□ -2.09
NMD3P38861 YER172C-AYER172C-A 381 nt2.01□□□□□ -2.09
NMD3P38861 QCR9YGR183C 201 nt2.01□□□□□ -2.09
NMD3P38861 UBP2YOR124C 3819 nt2.01□□□□□ -2.09
NMD3P38861 MDS3YGL197W 4464 nt2□□□□□ -2.09
NMD3P38861 NUP192YJL039C 5052 nt1.99□□□□□ -2.09
NMD3P38861 FIG2YCR089W 4830 nt1.99□□□□□ -2.09
NMD3P38861 EAF1YDR359C 2949 nt1.98□□□□□ -2.09
NMD3P38861 DNF3YMR162C 4971 nt1.98□□□□□ -2.09
NMD3P38861 VPS15YBR097W 4365 nt1.98□□□□□ -2.09
NMD3P38861 MON2YNL297C 4911 nt1.98□□□□□ -2.09
NMD3P38861 RAD9YDR217C 3930 nt1.97□□□□□ -2.09
NMD3P38861 YIL142C-AYIL142C-A 333 nt1.97□□□□□ -2.09
NMD3P38861 YML002WYML002W 2214 nt1.95□□□□□ -2.1
NMD3P38861 PEP1YBL017C 4740 nt1.95□□□□□ -2.1
NMD3P38861 TAH1YCR060W 336 nt1.95□□□□□ -2.1
NMD3P38861 RTP1YMR185W 2946 nt1.94□□□□□ -2.1
NMD3P38861 YHR131W-AYHR131W-A 246 nt1.94□□□□□ -2.1
NMD3P38861 COA6YMR244C-A 315 nt1.94□□□□□ -2.1
NMD3P38861 SXM1YDR395W 2835 nt1.94□□□□□ -2.1
NMD3P38861 PMD1YER132C 5262 nt1.93□□□□□ -2.1
NMD3P38861 tM(CAU)Q2tM(CAU)Q2 78 nt1.93□□□□□ -2.1
NMD3P38861 HUG1YML058W-A 207 nt1.93□□□□□ -2.1
NMD3P38861 YOR161W-AYOR161W-A 81 nt1.93□□□□□ -2.1
NMD3P38861 RAD50YNL250W 3939 nt1.93□□□□□ -2.1
NMD3P38861 SMC1YFL008W 3678 nt1.92□□□□□ -2.1
NMD3P38861 YMR272W-BYMR272W-B 108 nt1.92□□□□□ -2.1
NMD3P38861 snR39BsnR39B 96 nt1.92□□□□□ -2.1
NMD3P38861 YAR009CYAR009C 3591 nt1.92□□□□□ -2.1
NMD3P38861 KCS1YDR017C 3153 nt1.91□□□□□ -2.1
NMD3P38861 tS(GCU)Q1tS(GCU)Q1 86 nt1.91□□□□□ -2.1
NMD3P38861 YLR041WYLR041W 321 nt1.91□□□□□ -2.1
NMD3P38861 CLU1YMR012W 3834 nt1.88□□□□□ -2.11
Retrieved 100 of 7,029 protein–RNA pairs in 45.6 ms