Protein–RNA interactions for Protein: P25558

BUD3, Bud site selection protein 3, yeastyeast

Predictions only

Length 1,636 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
BUD3P25558 YNL162W-AYNL162W-A 219 nt-2.37□□□□□ -2.79
BUD3P25558 YCR018C-AYCR018C-A 255 nt-2.38□□□□□ -2.79
BUD3P25558 YGR228WYGR228W 345 nt-2.39□□□□□ -2.79
BUD3P25558 VAM3YOR106W 852 nt-2.39□□□□□ -2.79
BUD3P25558 snR49snR49 165 nt-2.4□□□□□ -2.79
BUD3P25558 RPS20YHL015W 366 nt-2.41□□□□□ -2.8
BUD3P25558 BER1YLR412W 825 nt-2.41□□□□□ -2.8
BUD3P25558 LOC1YFR001W 615 nt-2.42□□□□□ -2.8
BUD3P25558 YJR140W-AYJR140W-A 150 nt-2.42□□□□□ -2.8
BUD3P25558 BNS1YGR230W 414 nt-2.42□□□□□ -2.8
BUD3P25558 RUF20RUF20 443 nt-2.44□□□□□ -2.8
BUD3P25558 tT(UGU)Q1tT(UGU)Q1 76 nt-2.45□□□□□ -2.8
BUD3P25558 snR5snR5 204 nt-2.46□□□□□ -2.8
BUD3P25558 snR24snR24 89 nt-2.46□□□□□ -2.8
BUD3P25558 YDR290WYDR290W 330 nt-2.48□□□□□ -2.81
BUD3P25558 YBR072C-AYBR072C-A 162 nt-2.48□□□□□ -2.81
BUD3P25558 THG1YGR024C 714 nt-2.49□□□□□ -2.81
BUD3P25558 snR189snR189 189 nt-2.49□□□□□ -2.81
BUD3P25558 SPC24YMR117C 642 nt-2.5□□□□□ -2.81
BUD3P25558 PET20YPL159C 762 nt-2.5□□□□□ -2.81
BUD3P25558 YPR092WYPR092W 306 nt-2.5□□□□□ -2.81
BUD3P25558 PMP2YEL017C-A 132 nt-2.51□□□□□ -2.81
BUD3P25558 YPL068CYPL068C 882 nt-2.51□□□□□ -2.81
BUD3P25558 COX7YMR256C 183 nt-2.52□□□□□ -2.81
BUD3P25558 YOR011W-AYOR011W-A 207 nt-2.54□□□□□ -2.82
BUD3P25558 CUP1-1YHR053C 186 nt-2.57□□□□□ -2.82
BUD3P25558 CUP1-2YHR055C 186 nt-2.57□□□□□ -2.82
BUD3P25558 DFG10YIL049W 762 nt-2.57□□□□□ -2.82
BUD3P25558 YOR366WYOR366W 354 nt-2.57□□□□□ -2.82
BUD3P25558 SCEIQ0160 708 nt-2.59□□□□□ -2.82
BUD3P25558 YBL107W-AYBL107W-A 105 nt-2.6□□□□□ -2.83
BUD3P25558 VPS63YLR261C 327 nt-2.6□□□□□ -2.83
BUD3P25558 YLR264C-AYLR264C-A 117 nt-2.61□□□□□ -2.83
BUD3P25558 YGL015CYGL015C 393 nt-2.62□□□□□ -2.83
BUD3P25558 IRC16YPR038W 360 nt-2.62□□□□□ -2.83
BUD3P25558 YER135CYER135C 393 nt-2.63□□□□□ -2.83
BUD3P25558 YOR192C-CYOR192C-C 237 nt-2.63□□□□□ -2.83
BUD3P25558 YKL202WYKL202W 582 nt-2.64□□□□□ -2.83
BUD3P25558 YPR010C-AYPR010C-A 219 nt-2.64□□□□□ -2.83
BUD3P25558 RPL22BYFL034C-A 369 nt-2.64□□□□□ -2.83
BUD3P25558 LSM4YER112W 564 nt-2.65□□□□□ -2.83
BUD3P25558 CWC23YGL128C 852 nt-2.66□□□□□ -2.84
BUD3P25558 YDR366CYDR366C 399 nt-2.67□□□□□ -2.84
BUD3P25558 SGF11YPL047W 300 nt-2.67□□□□□ -2.84
BUD3P25558 HUR1YGL168W 333 nt-2.68□□□□□ -2.84
BUD3P25558 YOL106WYOL106W 354 nt-2.68□□□□□ -2.84
BUD3P25558 snR72snR72 98 nt-2.68□□□□□ -2.84
BUD3P25558 VPS20YMR077C 666 nt-2.69□□□□□ -2.84
BUD3P25558 YOR170WYOR170W 306 nt-2.69□□□□□ -2.84
BUD3P25558 snR74snR74 88 nt-2.73□□□□□ -2.85
BUD3P25558 CBS1YDL069C 690 nt-2.74□□□□□ -2.85
BUD3P25558 YER188C-AYER188C-A 300 nt-2.75□□□□□ -2.85
BUD3P25558 snR59snR59 78 nt-2.75□□□□□ -2.85
BUD3P25558 YPR016W-AYPR016W-A 261 nt-2.75□□□□□ -2.85
BUD3P25558 YGL052WYGL052W 306 nt-2.76□□□□□ -2.85
BUD3P25558 snR51snR51 107 nt-2.76□□□□□ -2.85
BUD3P25558 MND1YGL183C 660 nt-2.78□□□□□ -2.85
BUD3P25558 AIM29YKR074W 468 nt-2.78□□□□□ -2.85
BUD3P25558 POP7YBR167C 423 nt-2.79□□□□□ -2.86
BUD3P25558 SRB7YDR308C 423 nt-2.8□□□□□ -2.86
BUD3P25558 YKL063CYKL063C 504 nt-2.8□□□□□ -2.86
BUD3P25558 snR81snR81 201 nt-2.82□□□□□ -2.86
BUD3P25558 YGL239CYGL239C 315 nt-2.82□□□□□ -2.86
BUD3P25558 SDH6YDR379C-A 240 nt-2.83□□□□□ -2.86
BUD3P25558 RDS3YPR094W 324 nt-2.84□□□□□ -2.86
BUD3P25558 HMLALPHA2YCL067C 633 nt-2.85□□□□□ -2.87
BUD3P25558 MATALPHA2YCR039C 633 nt-2.85□□□□□ -2.87
BUD3P25558 HMRA2YCR096C 360 nt-2.85□□□□□ -2.87
BUD3P25558 YPT6YLR262C 648 nt-2.86□□□□□ -2.87
BUD3P25558 YNL058CYNL058C 951 nt-2.87□□□□□ -2.87
BUD3P25558 CDC65tQ(CUG)M 72 nt-2.88□□□□□ -2.87
BUD3P25558 ACF4YJR083C 930 nt-2.89□□□□□ -2.87
BUD3P25558 ZEO1YOL109W 342 nt-2.89□□□□□ -2.87
BUD3P25558 YER053C-AYER053C-A 114 nt-2.9□□□□□ -2.87
BUD3P25558 EAF6YJR082C 342 nt-2.91□□□□□ -2.88
BUD3P25558 FYV7YLR068W 456 nt-2.92□□□□□ -2.88
BUD3P25558 YFR009W-AYFR009W-A 258 nt-2.94□□□□□ -2.88
BUD3P25558 ILM1YJR118C 612 nt-2.95□□□□□ -2.88
BUD3P25558 YMR304C-AYMR304C-A 351 nt-2.95□□□□□ -2.88
BUD3P25558 YOR364WYOR364W 369 nt-2.96□□□□□ -2.88
BUD3P25558 YHR125WYHR125W 306 nt-2.97□□□□□ -2.88
BUD3P25558 YPL229WYPL229W 621 nt-2.97□□□□□ -2.88
BUD3P25558 YKL100W-AYKL100W-A 90 nt-2.97□□□□□ -2.89
BUD3P25558 YAR029WYAR029W 225 nt-2.99□□□□□ -2.89
BUD3P25558 YGR025WYGR025W 303 nt-3□□□□□ -2.89
BUD3P25558 YOR293C-AYOR293C-A 150 nt-3□□□□□ -2.89
BUD3P25558 JLP2YMR132C 627 nt-3.02□□□□□ -2.89
BUD3P25558 YBR285WYBR285W 435 nt-3.04□□□□□ -2.9
BUD3P25558 YOR121CYOR121C 306 nt-3.04□□□□□ -2.9
BUD3P25558 YNL171CYNL171C 369 nt-3.05□□□□□ -2.9
BUD3P25558 YLR334CYLR334C 381 nt-3.06□□□□□ -2.9
BUD3P25558 YGL230CYGL230C 444 nt-3.07□□□□□ -2.9
BUD3P25558 YJR087WYJR087W 351 nt-3.08□□□□□ -2.9
BUD3P25558 snR77snR77 88 nt-3.09□□□□□ -2.9
BUD3P25558 YGR240C-AYGR240C-A 201 nt-3.09□□□□□ -2.9
BUD3P25558 YCR001WYCR001W 315 nt-3.1□□□□□ -2.91
BUD3P25558 BUD26YDR241W 288 nt-3.11□□□□□ -2.91
BUD3P25558 YDR354C-AYDR354C-A 144 nt-3.11□□□□□ -2.91
BUD3P25558 YKL044WYKL044W 321 nt-3.11□□□□□ -2.91
BUD3P25558 YNL146C-AYNL146C-A 195 nt-3.11□□□□□ -2.91
Retrieved 100 of 7,029 protein–RNA pairs in 42.5 ms