Protein–RNA interactions for Protein: P23968

VMA16, V-type proton ATPase subunit c'', yeastyeast

Predictions only

Length 213 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VMA16P23968 NUP192YJL039C 5052 nt1.19□□□□□ -2.22
VMA16P23968 MSH3YCR092C 3057 nt1.18□□□□□ -2.22
VMA16P23968 YDR354C-AYDR354C-A 144 nt1.18□□□□□ -2.22
VMA16P23968 YGL188C-AYGL188C-A 141 nt1.18□□□□□ -2.22
VMA16P23968 CDC25YLR310C 4770 nt1.17□□□□□ -2.22
VMA16P23968 YJL026C-AYJL026C-A 222 nt1.17□□□□□ -2.22
VMA16P23968 YNL211CYNL211C 261 nt1.16□□□□□ -2.22
VMA16P23968 NOP9YJL010C 2001 nt1.15□□□□□ -2.22
VMA16P23968 snR55snR55 98 nt1.15□□□□□ -2.23
VMA16P23968 YLL019W-AYLL019W-A 93 nt1.15□□□□□ -2.23
VMA16P23968 YOL155W-AYOL155W-A 135 nt1.15□□□□□ -2.23
VMA16P23968 YDR366CYDR366C 399 nt1.14□□□□□ -2.23
VMA16P23968 YGL041CYGL041C 204 nt1.14□□□□□ -2.23
VMA16P23968 YIR030W-AYIR030W-A 384 nt1.14□□□□□ -2.23
VMA16P23968 ABF2YMR072W 552 nt1.14□□□□□ -2.23
VMA16P23968 CMC4YMR194C-B 222 nt1.14□□□□□ -2.23
VMA16P23968 ASE1YOR058C 2658 nt1.14□□□□□ -2.23
VMA16P23968 YOR072W-BYOR072W-B 162 nt1.13□□□□□ -2.23
VMA16P23968 snR80snR80 171 nt1.12□□□□□ -2.23
VMA16P23968 YAL067W-AYAL067W-A 228 nt1.12□□□□□ -2.23
VMA16P23968 NPR2YEL062W 1848 nt1.12□□□□□ -2.23
VMA16P23968 GEA2YEL022W 4380 nt1.11□□□□□ -2.23
VMA16P23968 NST1YNL091W 3723 nt1.11□□□□□ -2.23
VMA16P23968 APL1YJR005W 2103 nt1.1□□□□□ -2.23
VMA16P23968 PAA1YDR071C 576 nt1.1□□□□□ -2.23
VMA16P23968 ISD11YER048W-A 285 nt1.1□□□□□ -2.23
VMA16P23968 PFD1YJL179W 330 nt1.1□□□□□ -2.23
VMA16P23968 YDL196WYDL196W 330 nt1.09□□□□□ -2.23
VMA16P23968 CDC31YOR257W 486 nt1.09□□□□□ -2.23
VMA16P23968 YPL044CYPL044C 549 nt1.09□□□□□ -2.23
VMA16P23968 SMC1YFL008W 3678 nt1.09□□□□□ -2.24
VMA16P23968 VAM6YDL077C 3150 nt1.08□□□□□ -2.24
VMA16P23968 YFR012W-AYFR012W-A 87 nt1.08□□□□□ -2.24
VMA16P23968 YBR182C-AYBR182C-A 195 nt1.08□□□□□ -2.24
VMA16P23968 YKU70YMR284W 1809 nt1.08□□□□□ -2.24
VMA16P23968 YDL073WYDL073W 2955 nt1.08□□□□□ -2.24
VMA16P23968 PRP16YKR086W 3216 nt1.07□□□□□ -2.24
VMA16P23968 YDL185C-AYDL185C-A 228 nt1.06□□□□□ -2.24
VMA16P23968 YOR302WYOR302W 78 nt1.05□□□□□ -2.24
VMA16P23968 RPL26BYGR034W 384 nt1.04□□□□□ -2.24
VMA16P23968 PMP1YCR024C-A 123 nt1.03□□□□□ -2.24
VMA16P23968 BFR2YDR299W 1605 nt1.03□□□□□ -2.24
VMA16P23968 SPT7YBR081C 3999 nt1.02□□□□□ -2.25
VMA16P23968 TTI1YKL033W 3117 nt1.02□□□□□ -2.25
VMA16P23968 ANS1YHR126C 480 nt1.01□□□□□ -2.25
VMA16P23968 YIL134C-AYIL134C-A 204 nt1.01□□□□□ -2.25
VMA16P23968 COX12YLR038C 252 nt1□□□□□ -2.25
VMA16P23968 YPR117WYPR117W 7470 nt1□□□□□ -2.25
VMA16P23968 HAL9YOL089C 3093 nt0.99□□□□□ -2.25
VMA16P23968 RPS30BYOR182C 192 nt0.99□□□□□ -2.25
VMA16P23968 SCC2YDR180W 4482 nt0.99□□□□□ -2.25
VMA16P23968 COY1YKL179C 2040 nt0.98□□□□□ -2.25
VMA16P23968 YCR018C-AYCR018C-A 255 nt0.98□□□□□ -2.25
VMA16P23968 tH(GUG)E1tH(GUG)E1 72 nt0.98□□□□□ -2.25
VMA16P23968 tH(GUG)E2tH(GUG)E2 72 nt0.98□□□□□ -2.25
VMA16P23968 tH(GUG)G1tH(GUG)G1 72 nt0.98□□□□□ -2.25
VMA16P23968 tH(GUG)G2tH(GUG)G2 72 nt0.98□□□□□ -2.25
VMA16P23968 tH(GUG)HtH(GUG)H 72 nt0.98□□□□□ -2.25
VMA16P23968 tH(GUG)KtH(GUG)K 72 nt0.98□□□□□ -2.25
VMA16P23968 tH(GUG)MtH(GUG)M 72 nt0.98□□□□□ -2.25
VMA16P23968 YMR158W-BYMR158W-B 321 nt0.98□□□□□ -2.25
VMA16P23968 YNL097C-BYNL097C-B 123 nt0.98□□□□□ -2.25
VMA16P23968 YOR345CYOR345C 351 nt0.98□□□□□ -2.25
VMA16P23968 snR190snR190 190 nt0.98□□□□□ -2.25
VMA16P23968 YLR282CYLR282C 342 nt0.97□□□□□ -2.25
VMA16P23968 RPL33BYOR234C 324 nt0.97□□□□□ -2.25
VMA16P23968 YGL123C-AYGL123C-A 231 nt0.96□□□□□ -2.26
VMA16P23968 EMT1tM(CAU)D 73 nt0.96□□□□□ -2.26
VMA16P23968 EMT5tM(CAU)J1 73 nt0.96□□□□□ -2.26
VMA16P23968 EMT3tM(CAU)J2 73 nt0.96□□□□□ -2.26
VMA16P23968 EMT4tM(CAU)M 73 nt0.96□□□□□ -2.26
VMA16P23968 EMT2tM(CAU)O2 73 nt0.96□□□□□ -2.26
VMA16P23968 SEC8YPR055W 3198 nt0.96□□□□□ -2.26
VMA16P23968 DOP1YDR141C 5097 nt0.95□□□□□ -2.26
VMA16P23968 COX5BYIL111W 456 nt0.95□□□□□ -2.26
VMA16P23968 YOR161W-AYOR161W-A 81 nt0.95□□□□□ -2.26
VMA16P23968 YBR131C-AYBR131C-A 90 nt0.95□□□□□ -2.26
VMA16P23968 APQ12YIL040W 417 nt0.94□□□□□ -2.26
VMA16P23968 YPR160W-AYPR160W-A 81 nt0.94□□□□□ -2.26
VMA16P23968 RKR1YMR247C 4689 nt0.93□□□□□ -2.26
VMA16P23968 BEM2YER155C 6504 nt0.92□□□□□ -2.26
VMA16P23968 IML1YJR138W 4755 nt0.92□□□□□ -2.26
VMA16P23968 SPG3YDR504C 384 nt0.92□□□□□ -2.26
VMA16P23968 ULI1YFR026C 510 nt0.92□□□□□ -2.26
VMA16P23968 BLI1YKL061W 342 nt0.92□□□□□ -2.26
VMA16P23968 YIL002W-AYIL002W-A 210 nt0.91□□□□□ -2.26
VMA16P23968 YLR041WYLR041W 321 nt0.91□□□□□ -2.26
VMA16P23968 YLR399W-AYLR399W-A 105 nt0.91□□□□□ -2.26
VMA16P23968 YGR130CYGR130C 2451 nt0.91□□□□□ -2.26
VMA16P23968 YER053C-AYER053C-A 114 nt0.9□□□□□ -2.27
VMA16P23968 tV(UAC)BtV(UAC)B 74 nt0.9□□□□□ -2.27
VMA16P23968 tV(UAC)DtV(UAC)D 74 nt0.9□□□□□ -2.27
VMA16P23968 YKL100W-AYKL100W-A 90 nt0.9□□□□□ -2.27
VMA16P23968 YNL284C-BYNL284C-B 5268 nt0.9□□□□□ -2.27
VMA16P23968 PRP5YBR237W 2550 nt0.9□□□□□ -2.27
VMA16P23968 YCR038W-AYCR038W-A 126 nt0.89□□□□□ -2.27
VMA16P23968 YML002WYML002W 2214 nt0.88□□□□□ -2.27
VMA16P23968 JLP2YMR132C 627 nt0.88□□□□□ -2.27
VMA16P23968 UBP3YER151C 2739 nt0.88□□□□□ -2.27
VMA16P23968 CHS6YJL099W 2241 nt0.88□□□□□ -2.27
Retrieved 100 of 7,029 protein–RNA pairs in 28.1 ms