Protein–RNA interactions for Protein: Q8TE82

SH3TC1, SH3 domain and tetratricopeptide repeat-containing protein 1, humanhuman

Predictions only

Length 1,336 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC1Q8TE82 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
SH3TC1Q8TE82 TSPY15P-201ENST00000457163 923 ntBASIC25.14■■□□□ 1.62
SH3TC1Q8TE82 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC25.14■■□□□ 1.62
SH3TC1Q8TE82 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC25.14■■□□□ 1.62
SH3TC1Q8TE82 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC25.14■■□□□ 1.62
SH3TC1Q8TE82 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC25.14■■□□□ 1.62
SH3TC1Q8TE82 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC25.14■■□□□ 1.62
SH3TC1Q8TE82 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC25.14■■□□□ 1.62
SH3TC1Q8TE82 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC25.14■■□□□ 1.62
SH3TC1Q8TE82 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC25.14■■□□□ 1.62
SH3TC1Q8TE82 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC25.14■■□□□ 1.61
SH3TC1Q8TE82 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
SH3TC1Q8TE82 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC25.14■■□□□ 1.61
SH3TC1Q8TE82 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC25.13■■□□□ 1.61
SH3TC1Q8TE82 TREX2-204ENST00000370212 861 ntTSL 5 BASIC25.13■■□□□ 1.61
SH3TC1Q8TE82 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC25.13■■□□□ 1.61
SH3TC1Q8TE82 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC25.13■■□□□ 1.61
SH3TC1Q8TE82 F2R-202ENST00000505600 442 ntTSL 2 BASIC25.13■■□□□ 1.61
SH3TC1Q8TE82 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
SH3TC1Q8TE82 LINC01023-201ENST00000606054 436 ntBASIC25.13■■□□□ 1.61
SH3TC1Q8TE82 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
SH3TC1Q8TE82 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC25.13■■□□□ 1.61
SH3TC1Q8TE82 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
SH3TC1Q8TE82 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
SH3TC1Q8TE82 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC25.13■■□□□ 1.61
SH3TC1Q8TE82 HTR7P1-201ENST00000538670 1336 ntBASIC25.13■■□□□ 1.61
SH3TC1Q8TE82 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
SH3TC1Q8TE82 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
SH3TC1Q8TE82 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC25.13■■□□□ 1.61
SH3TC1Q8TE82 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
SH3TC1Q8TE82 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
SH3TC1Q8TE82 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
SH3TC1Q8TE82 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
SH3TC1Q8TE82 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC25.12■■□□□ 1.61
SH3TC1Q8TE82 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC25.12■■□□□ 1.61
SH3TC1Q8TE82 PNN-205ENST00000556530 601 ntTSL 2 BASIC25.12■■□□□ 1.61
SH3TC1Q8TE82 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC25.12■■□□□ 1.61
SH3TC1Q8TE82 SNX21-213ENST00000614929 587 ntTSL 5 BASIC25.12■■□□□ 1.61
SH3TC1Q8TE82 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC25.12■■□□□ 1.61
SH3TC1Q8TE82 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC25.12■■□□□ 1.61
SH3TC1Q8TE82 CLDN5-201ENST00000403084 2357 ntBASIC25.12■■□□□ 1.61
SH3TC1Q8TE82 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC25.12■■□□□ 1.61
SH3TC1Q8TE82 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC25.12■■□□□ 1.61
SH3TC1Q8TE82 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC25.12■■□□□ 1.61
SH3TC1Q8TE82 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
SH3TC1Q8TE82 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC25.12■■□□□ 1.61
SH3TC1Q8TE82 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC25.12■■□□□ 1.61
SH3TC1Q8TE82 HLA-G-202ENST00000376815 851 ntBASIC25.12■■□□□ 1.61
SH3TC1Q8TE82 HLA-G-203ENST00000376818 1127 ntBASIC25.12■■□□□ 1.61
SH3TC1Q8TE82 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
SH3TC1Q8TE82 SAPCD2P4-201ENST00000424595 1171 ntBASIC25.12■■□□□ 1.61
SH3TC1Q8TE82 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC25.12■■□□□ 1.61
SH3TC1Q8TE82 AL355075.4-201ENST00000554988 638 ntBASIC25.12■■□□□ 1.61
SH3TC1Q8TE82 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC25.12■■□□□ 1.61
SH3TC1Q8TE82 AF186192.3-201ENST00000583427 947 ntBASIC25.12■■□□□ 1.61
SH3TC1Q8TE82 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
SH3TC1Q8TE82 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC25.11■■□□□ 1.61
SH3TC1Q8TE82 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC25.11■■□□□ 1.61
SH3TC1Q8TE82 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC25.11■■□□□ 1.61
SH3TC1Q8TE82 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC25.11■■□□□ 1.61
SH3TC1Q8TE82 AF106564.1-201ENST00000607058 2553 ntBASIC25.11■■□□□ 1.61
SH3TC1Q8TE82 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC25.11■■□□□ 1.61
SH3TC1Q8TE82 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC25.11■■□□□ 1.61
SH3TC1Q8TE82 AL121603.2-201ENST00000557373 2117 ntBASIC25.11■■□□□ 1.61
SH3TC1Q8TE82 PLK5-205ENST00000642079 1969 ntBASIC25.11■■□□□ 1.61
SH3TC1Q8TE82 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
SH3TC1Q8TE82 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC25.11■■□□□ 1.61
SH3TC1Q8TE82 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
SH3TC1Q8TE82 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC25.11■■□□□ 1.61
SH3TC1Q8TE82 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC25.11■■□□□ 1.61
SH3TC1Q8TE82 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC25.11■■□□□ 1.61
SH3TC1Q8TE82 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC25.11■■□□□ 1.61
SH3TC1Q8TE82 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC25.11■■□□□ 1.61
SH3TC1Q8TE82 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC25.1■■□□□ 1.61
SH3TC1Q8TE82 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
SH3TC1Q8TE82 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC25.1■■□□□ 1.61
SH3TC1Q8TE82 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
SH3TC1Q8TE82 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
SH3TC1Q8TE82 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
SH3TC1Q8TE82 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC25.1■■□□□ 1.61
SH3TC1Q8TE82 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC25.1■■□□□ 1.61
SH3TC1Q8TE82 GRAP-204ENST00000573099 846 ntTSL 3 BASIC25.1■■□□□ 1.61
SH3TC1Q8TE82 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
SH3TC1Q8TE82 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
SH3TC1Q8TE82 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
SH3TC1Q8TE82 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC25.09■■□□□ 1.61
SH3TC1Q8TE82 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC25.09■■□□□ 1.61
SH3TC1Q8TE82 AL353807.1-201ENST00000427475 662 ntBASIC25.09■■□□□ 1.61
SH3TC1Q8TE82 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC25.09■■□□□ 1.61
SH3TC1Q8TE82 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC25.09■■□□□ 1.61
SH3TC1Q8TE82 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC25.09■■□□□ 1.61
SH3TC1Q8TE82 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC25.09■■□□□ 1.61
SH3TC1Q8TE82 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC25.09■■□□□ 1.61
SH3TC1Q8TE82 AL031963.3-201ENST00000606441 850 ntBASIC25.09■■□□□ 1.61
SH3TC1Q8TE82 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC25.09■■□□□ 1.61
SH3TC1Q8TE82 ERF-202ENST00000440177 2032 ntTSL 2 BASIC25.08■■□□□ 1.61
SH3TC1Q8TE82 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC25.08■■□□□ 1.61
SH3TC1Q8TE82 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
SH3TC1Q8TE82 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC25.08■■□□□ 1.61
SH3TC1Q8TE82 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
Retrieved 100 of 98,524 protein–RNA pairs in 89 ms