Protein–RNA interactions for Protein: Q12348

RRI2, COP9 signalosome complex subunit 10, yeastyeast

Predictions only

Length 645 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RRI2Q12348 IFH1YLR223C 3258 nt1.29□□□□□ -2.2
RRI2Q12348 YFL019CYFL019C 354 nt1.29□□□□□ -2.2
RRI2Q12348 MAM33YIL070C 801 nt1.29□□□□□ -2.2
RRI2Q12348 YAR053WYAR053W 297 nt1.29□□□□□ -2.2
RRI2Q12348 CDC39YCR093W 6327 nt1.28□□□□□ -2.21
RRI2Q12348 MDS3YGL197W 4464 nt1.27□□□□□ -2.21
RRI2Q12348 YAL063C-AYAL063C-A 291 nt1.27□□□□□ -2.21
RRI2Q12348 WAR1YML076C 2835 nt1.26□□□□□ -2.21
RRI2Q12348 PAN2YGL094C 3348 nt1.25□□□□□ -2.21
RRI2Q12348 YAR009CYAR009C 3591 nt1.25□□□□□ -2.21
RRI2Q12348 PTP2YOR208W 2253 nt1.25□□□□□ -2.21
RRI2Q12348 NIP100YPL174C 2607 nt1.24□□□□□ -2.21
RRI2Q12348 SPT7YBR081C 3999 nt1.24□□□□□ -2.21
RRI2Q12348 YBL008W-AYBL008W-A 240 nt1.24□□□□□ -2.21
RRI2Q12348 BIL1YOR304C-A 231 nt1.24□□□□□ -2.21
RRI2Q12348 YLL007CYLL007C 1998 nt1.24□□□□□ -2.21
RRI2Q12348 NUP157YER105C 4176 nt1.23□□□□□ -2.21
RRI2Q12348 YGR035CYGR035C 351 nt1.23□□□□□ -2.21
RRI2Q12348 SMC1YFL008W 3678 nt1.23□□□□□ -2.21
RRI2Q12348 ROM2YLR371W 4071 nt1.22□□□□□ -2.21
RRI2Q12348 CSN9YDR179C 489 nt1.22□□□□□ -2.21
RRI2Q12348 YOR029WYOR029W 336 nt1.22□□□□□ -2.21
RRI2Q12348 YPR170W-AYPR170W-A 186 nt1.22□□□□□ -2.21
RRI2Q12348 APL1YJR005W 2103 nt1.22□□□□□ -2.21
RRI2Q12348 YJR011CYJR011C 786 nt1.21□□□□□ -2.22
RRI2Q12348 RPL34BYIL052C 366 nt1.2□□□□□ -2.22
RRI2Q12348 NST1YNL091W 3723 nt1.17□□□□□ -2.22
RRI2Q12348 YDR118W-AYDR118W-A 117 nt1.17□□□□□ -2.22
RRI2Q12348 tW(UCA)QtW(UCA)Q 74 nt1.16□□□□□ -2.22
RRI2Q12348 PAM16YJL104W 450 nt1.16□□□□□ -2.22
RRI2Q12348 HTB2YBL002W 396 nt1.16□□□□□ -2.22
RRI2Q12348 GEA2YEL022W 4380 nt1.16□□□□□ -2.22
RRI2Q12348 HMRA2YCR096C 360 nt1.15□□□□□ -2.23
RRI2Q12348 YDR521WYDR521W 336 nt1.15□□□□□ -2.23
RRI2Q12348 YHL042WYHL042W 453 nt1.15□□□□□ -2.23
RRI2Q12348 YAR029WYAR029W 225 nt1.15□□□□□ -2.23
RRI2Q12348 VAM6YDL077C 3150 nt1.14□□□□□ -2.23
RRI2Q12348 YPR012WYPR012W 255 nt1.14□□□□□ -2.23
RRI2Q12348 RPL35AYDL191W 363 nt1.13□□□□□ -2.23
RRI2Q12348 RPS30BYOR182C 192 nt1.13□□□□□ -2.23
RRI2Q12348 OST1YJL002C 1431 nt1.13□□□□□ -2.23
RRI2Q12348 KAP120YPL125W 3099 nt1.12□□□□□ -2.23
RRI2Q12348 YCK3YER123W 1575 nt1.12□□□□□ -2.23
RRI2Q12348 ISD11YER048W-A 285 nt1.11□□□□□ -2.23
RRI2Q12348 YNL284C-BYNL284C-B 5268 nt1.11□□□□□ -2.23
RRI2Q12348 YBR206WYBR206W 324 nt1.1□□□□□ -2.23
RRI2Q12348 YDL196WYDL196W 330 nt1.09□□□□□ -2.23
RRI2Q12348 IES4YOR189W 351 nt1.09□□□□□ -2.23
RRI2Q12348 DBP6YNR038W 1890 nt1.09□□□□□ -2.24
RRI2Q12348 ALG13YGL047W 609 nt1.08□□□□□ -2.24
RRI2Q12348 YLR334CYLR334C 381 nt1.08□□□□□ -2.24
RRI2Q12348 YBR064WYBR064W 429 nt1.08□□□□□ -2.24
RRI2Q12348 SCC2YDR180W 4482 nt1.07□□□□□ -2.24
RRI2Q12348 INA22YIR024C 651 nt1.07□□□□□ -2.24
RRI2Q12348 YOR282WYOR282W 321 nt1.07□□□□□ -2.24
RRI2Q12348 YPR016W-AYPR016W-A 261 nt1.07□□□□□ -2.24
RRI2Q12348 YHR007C-AYHR007C-A 216 nt1.06□□□□□ -2.24
RRI2Q12348 BEM2YER155C 6504 nt1.06□□□□□ -2.24
RRI2Q12348 OLI1Q0130 231 nt1.05□□□□□ -2.24
RRI2Q12348 EMT1tM(CAU)D 73 nt1.05□□□□□ -2.24
RRI2Q12348 EMT5tM(CAU)J1 73 nt1.05□□□□□ -2.24
RRI2Q12348 EMT3tM(CAU)J2 73 nt1.05□□□□□ -2.24
RRI2Q12348 EMT4tM(CAU)M 73 nt1.05□□□□□ -2.24
RRI2Q12348 EMT2tM(CAU)O2 73 nt1.05□□□□□ -2.24
RRI2Q12348 YDR048CYDR048C 315 nt1.04□□□□□ -2.24
RRI2Q12348 YOR011W-AYOR011W-A 207 nt1.04□□□□□ -2.24
RRI2Q12348 PAU24YBR301W 363 nt1.04□□□□□ -2.24
RRI2Q12348 YHL046W-AYHL046W-A 327 nt1.03□□□□□ -2.24
RRI2Q12348 TAR1YLR154W-C 375 nt1.03□□□□□ -2.24
RRI2Q12348 YDR344CYDR344C 444 nt1.02□□□□□ -2.25
RRI2Q12348 ECM12YHR021W-A 456 nt1.02□□□□□ -2.25
RRI2Q12348 RPS25BYLR333C 327 nt1.02□□□□□ -2.25
RRI2Q12348 SPO21YOL091W 1830 nt1.02□□□□□ -2.25
RRI2Q12348 YPL044CYPL044C 549 nt1.02□□□□□ -2.25
RRI2Q12348 YPR197CYPR197C 564 nt1.01□□□□□ -2.25
RRI2Q12348 YPR117WYPR117W 7470 nt1□□□□□ -2.25
RRI2Q12348 YJR029WYJR029W 5268 nt1□□□□□ -2.25
RRI2Q12348 YPR137C-BYPR137C-B 5268 nt1□□□□□ -2.25
RRI2Q12348 PAA1YDR071C 576 nt0.99□□□□□ -2.25
RRI2Q12348 YPL038W-AYPL038W-A 192 nt0.99□□□□□ -2.25
RRI2Q12348 MCM10YIL150C 1716 nt0.98□□□□□ -2.25
RRI2Q12348 NOP9YJL010C 2001 nt0.98□□□□□ -2.25
RRI2Q12348 BUD3YCL014W 4911 nt0.98□□□□□ -2.25
RRI2Q12348 YIL142C-AYIL142C-A 333 nt0.98□□□□□ -2.25
RRI2Q12348 CMC4YMR194C-B 222 nt0.98□□□□□ -2.25
RRI2Q12348 YJL120WYJL120W 324 nt0.97□□□□□ -2.25
RRI2Q12348 DOP1YDR141C 5097 nt0.97□□□□□ -2.25
RRI2Q12348 BFR2YDR299W 1605 nt0.97□□□□□ -2.25
RRI2Q12348 YMR321CYMR321C 318 nt0.96□□□□□ -2.26
RRI2Q12348 SSS1YDR086C 243 nt0.95□□□□□ -2.26
RRI2Q12348 YHR063W-AYHR063W-A 336 nt0.95□□□□□ -2.26
RRI2Q12348 PMP1YCR024C-A 123 nt0.94□□□□□ -2.26
RRI2Q12348 tF(GAA)BtF(GAA)B 73 nt0.94□□□□□ -2.26
RRI2Q12348 tF(GAA)FtF(GAA)F 73 nt0.94□□□□□ -2.26
RRI2Q12348 tF(GAA)GtF(GAA)G 73 nt0.94□□□□□ -2.26
RRI2Q12348 tF(GAA)H1tF(GAA)H1 73 nt0.94□□□□□ -2.26
RRI2Q12348 tF(GAA)H2tF(GAA)H2 73 nt0.94□□□□□ -2.26
RRI2Q12348 tF(GAA)MtF(GAA)M 73 nt0.94□□□□□ -2.26
RRI2Q12348 tF(GAA)P1tF(GAA)P1 73 nt0.94□□□□□ -2.26
RRI2Q12348 tF(GAA)P2tF(GAA)P2 73 nt0.94□□□□□ -2.26
Retrieved 100 of 7,029 protein–RNA pairs in 96.4 ms