Protein–RNA interactions for Protein: Q01844

EWSR1, RNA-binding protein EWS, humanhuman

Known RBP eCLIP

Length 656 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EWSR1Q01844 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.553e-7■□□□□ 10.8
EWSR1Q01844 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC20.76■□□□□ 0.911e-6■□□□□ 10.7
EWSR1Q01844 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.313e-13■□□□□ 10.7
EWSR1Q01844 SRSF4-202ENST00000466448 1264 ntAPPRIS ALT2 TSL 314.04□□□□□ -0.163e-13■□□□□ 10.7
EWSR1Q01844 SRSF4-206ENST00000605204 1399 ntTSL 1 (best)14.03□□□□□ -0.163e-13■□□□□ 10.7
EWSR1Q01844 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC15.1■□□□□ 0.016e-7■□□□□ 10.7
EWSR1Q01844 SCAF8-204ENST00000461219 677 ntTSL 514.98□□□□□ -0.016e-7■□□□□ 10.7
EWSR1Q01844 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.116e-7■□□□□ 10.7
EWSR1Q01844 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.126e-7■□□□□ 10.7
EWSR1Q01844 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC14.01□□□□□ -0.176e-7■□□□□ 10.7
EWSR1Q01844 FLNA-216ENST00000490936 5374 ntTSL 1 (best)13.97□□□□□ -0.176e-7■□□□□ 10.7
EWSR1Q01844 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC12.66□□□□□ -0.386e-7■□□□□ 10.7
EWSR1Q01844 ZNF644-208ENST00000482467 710 ntTSL 512.4□□□□□ -0.426e-7■□□□□ 10.7
EWSR1Q01844 MVD-207ENST00000563463 543 ntTSL 311.82□□□□□ -0.525e-6■□□□□ 10.7
EWSR1Q01844 FLNA-206ENST00000420627 8225 ntTSL 511.54□□□□□ -0.566e-7■□□□□ 10.7
EWSR1Q01844 FLNA-201ENST00000344736 7932 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.576e-7■□□□□ 10.7
EWSR1Q01844 FLNA-203ENST00000369850 8382 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.596e-7■□□□□ 10.7
EWSR1Q01844 SCAF8-203ENST00000417268 4944 ntTSL 2 BASIC11.12□□□□□ -0.636e-7■□□□□ 10.7
EWSR1Q01844 FLNA-204ENST00000369856 8241 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.676e-7■□□□□ 10.7
EWSR1Q01844 FLNA-202ENST00000360319 8281 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.726e-7■□□□□ 10.7
EWSR1Q01844 FLNA-219ENST00000610817 7595 ntTSL 5 BASIC10.32□□□□□ -0.766e-7■□□□□ 10.7
EWSR1Q01844 ZNF644-211ENST00000498303 514 ntTSL 1 (best)10.31□□□□□ -0.766e-7■□□□□ 10.7
EWSR1Q01844 SCAF8-202ENST00000367186 4908 ntTSL 2 BASIC9.19□□□□□ -0.946e-7■□□□□ 10.7
EWSR1Q01844 SCAF8-205ENST00000464628 468 ntTSL 58.7□□□□□ -1.026e-7■□□□□ 10.7
EWSR1Q01844 ZNF644-202ENST00000347275 2036 ntTSL 1 (best) BASIC7.2□□□□□ -1.266e-7■□□□□ 10.7
EWSR1Q01844 ZNF644-210ENST00000495966 820 ntTSL 35.52□□□□□ -1.536e-7■□□□□ 10.7
EWSR1Q01844 ZNF644-204ENST00000370440 5702 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.566e-7■□□□□ 10.7
EWSR1Q01844 ZNF644-205ENST00000467231 851 ntTSL 32.03□□□□□ -2.086e-7■□□□□ 10.7
EWSR1Q01844 MBD3-211ENST00000592965 568 ntTSL 417.15■□□□□ 0.341e-6■□□□□ 10.7
EWSR1Q01844 MBD3-204ENST00000585967 583 ntTSL 412.51□□□□□ -0.411e-6■□□□□ 10.7
EWSR1Q01844 CSNK1D-212ENST00000580061 578 ntTSL 312.29□□□□□ -0.441e-6■□□□□ 10.6
EWSR1Q01844 UBAC1-204ENST00000478485 773 ntTSL 217.65■□□□□ 0.428e-7■□□□□ 10.6
EWSR1Q01844 GATAD2A-209ENST00000448576 271 ntTSL 321.01■□□□□ 0.955e-7■□□□□ 10.6
EWSR1Q01844 GATAD2A-212ENST00000494516 640 ntTSL 214.93□□□□□ -0.025e-7■□□□□ 10.6
EWSR1Q01844 AC010327.5-201ENST00000586923 3061 ntBASIC12.78□□□□□ -0.365e-7■□□□□ 10.6
EWSR1Q01844 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.385e-7■□□□□ 10.6
EWSR1Q01844 SSU72-202ENST00000359060 4176 ntTSL 2 BASIC9.61□□□□□ -0.875e-7■□□□□ 10.6
EWSR1Q01844 CR1L-203ENST00000508064 1788 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.95e-7■□□□□ 10.6
EWSR1Q01844 CD46P1-201ENST00000441364 763 ntBASIC6.92□□□□□ -1.35e-7■□□□□ 10.6
EWSR1Q01844 CR1L-205ENST00000531844 663 ntTSL 26.8□□□□□ -1.325e-7■□□□□ 10.6
EWSR1Q01844 DGCR2-202ENST00000389262 4814 ntTSL 1 (best)12.3□□□□□ -0.446e-7■□□□□ 10.6
EWSR1Q01844 DGCR2-201ENST00000263196 4480 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.596e-7■□□□□ 10.6
EWSR1Q01844 DGCR2-206ENST00000545799 4484 ntTSL 5 BASIC11.35□□□□□ -0.596e-7■□□□□ 10.6
EWSR1Q01844 DGCR2-205ENST00000537045 4361 ntTSL 2 BASIC10.01□□□□□ -0.816e-7■□□□□ 10.6
EWSR1Q01844 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.846e-7■□□□□ 10.5
EWSR1Q01844 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.242e-8■□□□□ 10.5
EWSR1Q01844 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.252e-8■□□□□ 10.5
EWSR1Q01844 NEK7-205ENST00000442588 519 ntTSL 512.56□□□□□ -0.42e-8■□□□□ 10.5
EWSR1Q01844 NEK7-201ENST00000367383 586 ntTSL 2 BASIC12.21□□□□□ -0.452e-8■□□□□ 10.5
EWSR1Q01844 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC17.42■□□□□ 0.383e-7■□□□□ 10.4
EWSR1Q01844 AC110285.2-202ENST00000608155 414 ntTSL 512.03□□□□□ -0.483e-7■□□□□ 10.4
EWSR1Q01844 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.694e-11■□□□□ 10.4
EWSR1Q01844 SEPT5-212ENST00000470814 2353 ntTSL 516.71■□□□□ 0.274e-11■□□□□ 10.4
EWSR1Q01844 NEAT1-204ENST00000612303 572 ntTSL 3 BASIC10.66□□□□□ -0.77e-34■□□□□ 10.4
EWSR1Q01844 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.524e-6■□□□□ 10.4
EWSR1Q01844 CLN6-224ENST00000638076 2323 ntTSL 1 (best)18.14■□□□□ 0.494e-6■□□□□ 10.4
EWSR1Q01844 AC107871.1-203ENST00000637054 3238 ntTSL 514.62□□□□□ -0.074e-6■□□□□ 10.4
EWSR1Q01844 AC107871.1-201ENST00000637888 2941 ntTSL 514.5□□□□□ -0.094e-6■□□□□ 10.4
EWSR1Q01844 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC14.02□□□□□ -0.164e-6■□□□□ 10.4
EWSR1Q01844 UBAC1-206ENST00000489050 864 ntTSL 37.18□□□□□ -1.264e-7■□□□□ 10.4
EWSR1Q01844 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.061e-6■□□□□ 10.3
EWSR1Q01844 SCRIB-207ENST00000531942 421 ntTSL 216.22■□□□□ 0.191e-6■□□□□ 10.3
EWSR1Q01844 EIF4G2-207ENST00000525995 592 ntTSL 415.69■□□□□ 0.11e-6■□□□□ 10.3
EWSR1Q01844 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.081e-6■□□□□ 10.3
EWSR1Q01844 EIF4G2-203ENST00000524932 1286 ntTSL 515.32■□□□□ 0.041e-6■□□□□ 10.3
EWSR1Q01844 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.041e-6■□□□□ 10.3
EWSR1Q01844 DDB1-220ENST00000542337 558 ntTSL 314.86□□□□□ -0.031e-6■□□□□ 10.3
EWSR1Q01844 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.141e-6■□□□□ 10.3
EWSR1Q01844 GOLGA2-203ENST00000458730 704 ntTSL 513.8□□□□□ -0.21e-6■□□□□ 10.3
EWSR1Q01844 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.251e-6■□□□□ 10.3
EWSR1Q01844 CHTF18-206ENST00000461268 814 ntTSL 512.9□□□□□ -0.341e-6■□□□□ 10.3
EWSR1Q01844 EIF4G2-228ENST00000534246 523 ntTSL 211.88□□□□□ -0.511e-6■□□□□ 10.3
EWSR1Q01844 POTEE-201ENST00000356920 4159 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.551e-6■□□□□ 10.3
EWSR1Q01844 EIF4G2-210ENST00000527419 571 ntTSL 511.39□□□□□ -0.591e-6■□□□□ 10.3
EWSR1Q01844 SLC39A7-204ENST00000463972 1410 ntTSL 210.94□□□□□ -0.661e-6■□□□□ 10.3
EWSR1Q01844 FAM118A-207ENST00000459849 695 ntTSL 310.68□□□□□ -0.71e-6■□□□□ 10.3
EWSR1Q01844 EIF4G2-216ENST00000530702 563 ntTSL 210.11□□□□□ -0.791e-6■□□□□ 10.3
EWSR1Q01844 CHTF18-212ENST00000493715 691 ntTSL 310.08□□□□□ -0.81e-6■□□□□ 10.3
EWSR1Q01844 AACSP1-201ENST00000503486 2822 ntTSL 1 (best) BASIC9.85□□□□□ -0.831e-6■□□□□ 10.3
EWSR1Q01844 DDB1-223ENST00000543658 571 ntTSL 49.28□□□□□ -0.921e-6■□□□□ 10.3
EWSR1Q01844 FAM118A-210ENST00000476754 675 ntTSL 39.23□□□□□ -0.931e-6■□□□□ 10.3
EWSR1Q01844 AACSP1-202ENST00000521412 1095 ntBASIC9.15□□□□□ -0.941e-6■□□□□ 10.3
EWSR1Q01844 FAM118A-209ENST00000476478 354 ntTSL 39.05□□□□□ -0.961e-6■□□□□ 10.3
EWSR1Q01844 EIF4G2-214ENST00000530211 591 ntTSL 28.85□□□□□ -0.991e-6■□□□□ 10.3
EWSR1Q01844 DDB1-221ENST00000543162 575 ntTSL 48.43□□□□□ -1.061e-6■□□□□ 10.3
EWSR1Q01844 EIF4G2-221ENST00000532082 1069 ntTSL 1 (best)8.39□□□□□ -1.071e-6■□□□□ 10.3
EWSR1Q01844 EIF4G2-201ENST00000339995 3978 ntAPPRIS ALT2 TSL 1 (best) BASIC8.13□□□□□ -1.111e-6■□□□□ 10.3
EWSR1Q01844 DDB1-222ENST00000543627 540 ntTSL 58.12□□□□□ -1.111e-6■□□□□ 10.3
EWSR1Q01844 DDB1-214ENST00000539426 805 ntTSL 38.11□□□□□ -1.111e-6■□□□□ 10.3
EWSR1Q01844 EIF4G2-219ENST00000531507 591 ntTSL 57.7□□□□□ -1.181e-6■□□□□ 10.3
EWSR1Q01844 DDB1-217ENST00000540166 3906 ntTSL 27.57□□□□□ -1.21e-6■□□□□ 10.3
EWSR1Q01844 EIF4G2-226ENST00000532570 573 ntTSL 57.39□□□□□ -1.231e-6■□□□□ 10.3
EWSR1Q01844 EIF4G2-202ENST00000396525 3346 ntAPPRIS ALT2 TSL 5 BASIC7.08□□□□□ -1.281e-6■□□□□ 10.3
EWSR1Q01844 DDB1-208ENST00000537120 1215 ntTSL 26.17□□□□□ -1.421e-6■□□□□ 10.3
EWSR1Q01844 EIF4G2-206ENST00000525972 584 ntTSL 24.89□□□□□ -1.631e-6■□□□□ 10.3
EWSR1Q01844 EIF4G2-212ENST00000528562 601 ntTSL 44.07□□□□□ -1.761e-6■□□□□ 10.3
EWSR1Q01844 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.229e-7■□□□□ 10.2
EWSR1Q01844 OGFOD2-213ENST00000540324 1828 ntTSL 1 (best)16.1■□□□□ 0.179e-7■□□□□ 10.2
EWSR1Q01844 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.179e-7■□□□□ 10.2
EWSR1Q01844 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC15.72■□□□□ 0.119e-7■□□□□ 10.2
Retrieved 100 of 7,101 protein–RNA pairs in 115.1 ms