Protein–RNA interactions for Protein: P53081

NIF3, NGG1-interacting factor 3, yeastyeast

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
NIF3P53081 PKH2YOL100W 3246 nt0.74□□□□□ -2.29
NIF3P53081 PAC1YOR269W 1485 nt0.73□□□□□ -2.29
NIF3P53081 YDL196WYDL196W 330 nt0.73□□□□□ -2.29
NIF3P53081 RPS20YHL015W 366 nt0.73□□□□□ -2.29
NIF3P53081 RPL38YLR325C 237 nt0.73□□□□□ -2.29
NIF3P53081 YOR032W-AYOR032W-A 201 nt0.73□□□□□ -2.29
NIF3P53081 YJR157WYJR157W 363 nt0.72□□□□□ -2.29
NIF3P53081 YNL324WYNL324W 396 nt0.71□□□□□ -2.3
NIF3P53081 RKR1YMR247C 4689 nt0.7□□□□□ -2.3
NIF3P53081 YER079WYER079W 633 nt0.7□□□□□ -2.3
NIF3P53081 MAM33YIL070C 801 nt0.7□□□□□ -2.3
NIF3P53081 YML007C-AYML007C-A 111 nt0.7□□□□□ -2.3
NIF3P53081 YPR002C-AYPR002C-A 198 nt0.7□□□□□ -2.3
NIF3P53081 CUL3YGR003W 2235 nt0.69□□□□□ -2.3
NIF3P53081 SWF1YDR126W 1011 nt0.69□□□□□ -2.3
NIF3P53081 YDR521WYDR521W 336 nt0.69□□□□□ -2.3
NIF3P53081 YJR011CYJR011C 786 nt0.69□□□□□ -2.3
NIF3P53081 ISD11YER048W-A 285 nt0.68□□□□□ -2.3
NIF3P53081 AGA2YGL032C 264 nt0.68□□□□□ -2.3
NIF3P53081 Q0144Q0144 330 nt0.68□□□□□ -2.3
NIF3P53081 YOR072W-AYOR072W-A 249 nt0.68□□□□□ -2.3
NIF3P53081 YLR264C-AYLR264C-A 117 nt0.67□□□□□ -2.3
NIF3P53081 YPR159C-AYPR159C-A 102 nt0.67□□□□□ -2.3
NIF3P53081 YLL007CYLL007C 1998 nt0.66□□□□□ -2.3
NIF3P53081 NHP2YDL208W 471 nt0.66□□□□□ -2.3
NIF3P53081 YDR426CYDR426C 378 nt0.66□□□□□ -2.3
NIF3P53081 YHR138CYHR138C 345 nt0.65□□□□□ -2.31
NIF3P53081 BSC3YLR465C 309 nt0.65□□□□□ -2.31
NIF3P53081 IES4YOR189W 351 nt0.65□□□□□ -2.31
NIF3P53081 YBR064WYBR064W 429 nt0.65□□□□□ -2.31
NIF3P53081 YBR206WYBR206W 324 nt0.65□□□□□ -2.31
NIF3P53081 YBR285WYBR285W 435 nt0.65□□□□□ -2.31
NIF3P53081 DBP6YNR038W 1890 nt0.65□□□□□ -2.31
NIF3P53081 ALG13YGL047W 609 nt0.64□□□□□ -2.31
NIF3P53081 VPS20YMR077C 666 nt0.64□□□□□ -2.31
NIF3P53081 SEC1YDR164C 2175 nt0.64□□□□□ -2.31
NIF3P53081 PTP2YOR208W 2253 nt0.64□□□□□ -2.31
NIF3P53081 YDR344CYDR344C 444 nt0.63□□□□□ -2.31
NIF3P53081 PCC1YKR095W-A 267 nt0.63□□□□□ -2.31
NIF3P53081 YOR053WYOR053W 342 nt0.63□□□□□ -2.31
NIF3P53081 BFR2YDR299W 1605 nt0.63□□□□□ -2.31
NIF3P53081 PAM16YJL104W 450 nt0.62□□□□□ -2.31
NIF3P53081 YOR282WYOR282W 321 nt0.62□□□□□ -2.31
NIF3P53081 YCK3YER123W 1575 nt0.62□□□□□ -2.31
NIF3P53081 PMP1YCR024C-A 123 nt0.61□□□□□ -2.31
NIF3P53081 YER137W-AYER137W-A 306 nt0.61□□□□□ -2.31
NIF3P53081 YMR001C-AYMR001C-A 231 nt0.61□□□□□ -2.31
NIF3P53081 CMC4YMR194C-B 222 nt0.61□□□□□ -2.31
NIF3P53081 NOP9YJL010C 2001 nt0.6□□□□□ -2.31
NIF3P53081 CSN9YDR179C 489 nt0.6□□□□□ -2.31
NIF3P53081 YMR031W-AYMR031W-A 327 nt0.6□□□□□ -2.31
NIF3P53081 YMR272W-AYMR272W-A 114 nt0.6□□□□□ -2.31
NIF3P53081 LEE1YPL054W 906 nt0.6□□□□□ -2.31
NIF3P53081 MCM10YIL150C 1716 nt0.59□□□□□ -2.31
NIF3P53081 YOR121CYOR121C 306 nt0.59□□□□□ -2.31
NIF3P53081 UBP3YER151C 2739 nt0.59□□□□□ -2.32
NIF3P53081 OLI1Q0130 231 nt0.58□□□□□ -2.32
NIF3P53081 ECM12YHR021W-A 456 nt0.58□□□□□ -2.32
NIF3P53081 YLR222C-AYLR222C-A 231 nt0.58□□□□□ -2.32
NIF3P53081 YHR063W-AYHR063W-A 336 nt0.57□□□□□ -2.32
NIF3P53081 YOR029WYOR029W 336 nt0.57□□□□□ -2.32
NIF3P53081 YPL044CYPL044C 549 nt0.57□□□□□ -2.32
NIF3P53081 tT(AGU)BtT(AGU)B 73 nt0.56□□□□□ -2.32
NIF3P53081 tT(AGU)CtT(AGU)C 73 nt0.56□□□□□ -2.32
NIF3P53081 tT(AGU)DtT(AGU)D 73 nt0.56□□□□□ -2.32
NIF3P53081 tT(AGU)HtT(AGU)H 73 nt0.56□□□□□ -2.32
NIF3P53081 tT(AGU)I1tT(AGU)I1 73 nt0.56□□□□□ -2.32
NIF3P53081 tT(AGU)I2tT(AGU)I2 73 nt0.56□□□□□ -2.32
NIF3P53081 tT(AGU)JtT(AGU)J 73 nt0.56□□□□□ -2.32
NIF3P53081 tT(AGU)N1tT(AGU)N1 73 nt0.56□□□□□ -2.32
NIF3P53081 tT(AGU)N2tT(AGU)N2 73 nt0.56□□□□□ -2.32
NIF3P53081 tT(AGU)O1tT(AGU)O1 73 nt0.56□□□□□ -2.32
NIF3P53081 tT(AGU)O2tT(AGU)O2 73 nt0.56□□□□□ -2.32
NIF3P53081 YLR334CYLR334C 381 nt0.56□□□□□ -2.32
NIF3P53081 ASE1YOR058C 2658 nt0.55□□□□□ -2.32
NIF3P53081 YAL068W-AYAL068W-A 255 nt0.55□□□□□ -2.32
NIF3P53081 MYO1YHR023W 5787 nt0.55□□□□□ -2.32
NIF3P53081 OST1YJL002C 1431 nt0.55□□□□□ -2.32
NIF3P53081 HMRA2YCR096C 360 nt0.54□□□□□ -2.32
NIF3P53081 YLR154W-FYLR154W-F 141 nt0.54□□□□□ -2.32
NIF3P53081 UTP10YJL109C 5310 nt0.53□□□□□ -2.32
NIF3P53081 CHS6YJL099W 2241 nt0.53□□□□□ -2.32
NIF3P53081 YJL120WYJL120W 324 nt0.53□□□□□ -2.32
NIF3P53081 YOR293C-AYOR293C-A 150 nt0.53□□□□□ -2.32
NIF3P53081 NPR2YEL062W 1848 nt0.52□□□□□ -2.33
NIF3P53081 YFR012W-AYFR012W-A 87 nt0.52□□□□□ -2.33
NIF3P53081 STF2YGR008C 255 nt0.52□□□□□ -2.33
NIF3P53081 tW(UCA)QtW(UCA)Q 74 nt0.52□□□□□ -2.33
NIF3P53081 YIL142C-AYIL142C-A 333 nt0.52□□□□□ -2.33
NIF3P53081 YAR029WYAR029W 225 nt0.52□□□□□ -2.33
NIF3P53081 SPO21YOL091W 1830 nt0.52□□□□□ -2.33
NIF3P53081 PAA1YDR071C 576 nt0.51□□□□□ -2.33
NIF3P53081 YAR053WYAR053W 297 nt0.51□□□□□ -2.33
NIF3P53081 RPS25BYLR333C 327 nt0.51□□□□□ -2.33
NIF3P53081 YOR011W-AYOR011W-A 207 nt0.51□□□□□ -2.33
NIF3P53081 LTE1YAL024C 4308 nt0.51□□□□□ -2.33
NIF3P53081 YNL211CYNL211C 261 nt0.5□□□□□ -2.33
NIF3P53081 YPL225WYPL225W 441 nt0.5□□□□□ -2.33
NIF3P53081 YML002WYML002W 2214 nt0.5□□□□□ -2.33
NIF3P53081 RPL35AYDL191W 363 nt0.49□□□□□ -2.33
Retrieved 100 of 7,029 protein–RNA pairs in 29 ms