Protein–RNA interactions for Protein: P38915

SPT8, Transcription factor SPT8, yeastyeast

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SPT8P38915 YDL206WYDL206W 2289 nt0.81□□□□□ -2.28
SPT8P38915 MMS4YBR098W 2076 nt0.8□□□□□ -2.28
SPT8P38915 RIM20YOR275C 1986 nt0.8□□□□□ -2.28
SPT8P38915 NHP2YDL208W 471 nt0.8□□□□□ -2.28
SPT8P38915 SWF1YDR126W 1011 nt0.8□□□□□ -2.28
SPT8P38915 RAD34YDR314C 2079 nt0.8□□□□□ -2.28
SPT8P38915 PDE2YOR360C 1581 nt0.79□□□□□ -2.28
SPT8P38915 YDL196WYDL196W 330 nt0.79□□□□□ -2.28
SPT8P38915 ATG31YDR022C 591 nt0.78□□□□□ -2.28
SPT8P38915 YDR521WYDR521W 336 nt0.78□□□□□ -2.28
SPT8P38915 AGA2YGL032C 264 nt0.78□□□□□ -2.28
SPT8P38915 YPL261CYPL261C 309 nt0.78□□□□□ -2.28
SPT8P38915 YHR138CYHR138C 345 nt0.77□□□□□ -2.29
SPT8P38915 CMC4YMR194C-B 222 nt0.77□□□□□ -2.29
SPT8P38915 MYO1YHR023W 5787 nt0.77□□□□□ -2.29
SPT8P38915 INP2YMR163C 2118 nt0.77□□□□□ -2.29
SPT8P38915 NIP100YPL174C 2607 nt0.77□□□□□ -2.29
SPT8P38915 tT(AGU)BtT(AGU)B 73 nt0.76□□□□□ -2.29
SPT8P38915 tT(AGU)CtT(AGU)C 73 nt0.76□□□□□ -2.29
SPT8P38915 tT(AGU)DtT(AGU)D 73 nt0.76□□□□□ -2.29
SPT8P38915 tT(AGU)HtT(AGU)H 73 nt0.76□□□□□ -2.29
SPT8P38915 tT(AGU)I1tT(AGU)I1 73 nt0.76□□□□□ -2.29
SPT8P38915 tT(AGU)I2tT(AGU)I2 73 nt0.76□□□□□ -2.29
SPT8P38915 tT(AGU)JtT(AGU)J 73 nt0.76□□□□□ -2.29
SPT8P38915 tT(AGU)N1tT(AGU)N1 73 nt0.76□□□□□ -2.29
SPT8P38915 tT(AGU)N2tT(AGU)N2 73 nt0.76□□□□□ -2.29
SPT8P38915 tT(AGU)O1tT(AGU)O1 73 nt0.76□□□□□ -2.29
SPT8P38915 tT(AGU)O2tT(AGU)O2 73 nt0.76□□□□□ -2.29
SPT8P38915 YJR011CYJR011C 786 nt0.76□□□□□ -2.29
SPT8P38915 LEE1YPL054W 906 nt0.76□□□□□ -2.29
SPT8P38915 YMR160WYMR160W 2451 nt0.76□□□□□ -2.29
SPT8P38915 CSN9YDR179C 489 nt0.75□□□□□ -2.29
SPT8P38915 YER137W-AYER137W-A 306 nt0.75□□□□□ -2.29
SPT8P38915 YLR264C-AYLR264C-A 117 nt0.75□□□□□ -2.29
SPT8P38915 YOR072W-AYOR072W-A 249 nt0.75□□□□□ -2.29
SPT8P38915 YBR206WYBR206W 324 nt0.75□□□□□ -2.29
SPT8P38915 YBR285WYBR285W 435 nt0.75□□□□□ -2.29
SPT8P38915 LTE1YAL024C 4308 nt0.75□□□□□ -2.29
SPT8P38915 tF(GAA)BtF(GAA)B 73 nt0.74□□□□□ -2.29
SPT8P38915 tF(GAA)FtF(GAA)F 73 nt0.74□□□□□ -2.29
SPT8P38915 tF(GAA)GtF(GAA)G 73 nt0.74□□□□□ -2.29
SPT8P38915 tF(GAA)H1tF(GAA)H1 73 nt0.74□□□□□ -2.29
SPT8P38915 tF(GAA)H2tF(GAA)H2 73 nt0.74□□□□□ -2.29
SPT8P38915 tF(GAA)MtF(GAA)M 73 nt0.74□□□□□ -2.29
SPT8P38915 tF(GAA)P1tF(GAA)P1 73 nt0.74□□□□□ -2.29
SPT8P38915 tF(GAA)P2tF(GAA)P2 73 nt0.74□□□□□ -2.29
SPT8P38915 YGR174W-AYGR174W-A 87 nt0.74□□□□□ -2.29
SPT8P38915 MAM33YIL070C 801 nt0.74□□□□□ -2.29
SPT8P38915 YKL063CYKL063C 504 nt0.74□□□□□ -2.29
SPT8P38915 YLR222C-AYLR222C-A 231 nt0.74□□□□□ -2.29
SPT8P38915 YOR108C-AYOR108C-A 210 nt0.74□□□□□ -2.29
SPT8P38915 WAR1YML076C 2835 nt0.73□□□□□ -2.29
SPT8P38915 YDR426CYDR426C 378 nt0.73□□□□□ -2.29
SPT8P38915 BSC3YLR465C 309 nt0.73□□□□□ -2.29
SPT8P38915 YMR272W-AYMR272W-A 114 nt0.73□□□□□ -2.29
SPT8P38915 YNL058CYNL058C 951 nt0.73□□□□□ -2.29
SPT8P38915 YNL324WYNL324W 396 nt0.73□□□□□ -2.29
SPT8P38915 YOR293C-AYOR293C-A 150 nt0.73□□□□□ -2.29
SPT8P38915 YBR064WYBR064W 429 nt0.73□□□□□ -2.29
SPT8P38915 PKH2YOL100W 3246 nt0.73□□□□□ -2.29
SPT8P38915 PAU12YGR294W 363 nt0.72□□□□□ -2.29
SPT8P38915 YHL042WYHL042W 453 nt0.72□□□□□ -2.29
SPT8P38915 RPL38YLR325C 237 nt0.72□□□□□ -2.29
SPT8P38915 YMR290W-AYMR290W-A 348 nt0.72□□□□□ -2.29
SPT8P38915 YPR002C-AYPR002C-A 198 nt0.72□□□□□ -2.29
SPT8P38915 BFR2YDR299W 1605 nt0.71□□□□□ -2.3
SPT8P38915 PAN2YGL094C 3348 nt0.71□□□□□ -2.3
SPT8P38915 GPG1YGL121C 381 nt0.7□□□□□ -2.3
SPT8P38915 YML007C-AYML007C-A 111 nt0.7□□□□□ -2.3
SPT8P38915 YMR031W-AYMR031W-A 327 nt0.7□□□□□ -2.3
SPT8P38915 YPR159C-AYPR159C-A 102 nt0.7□□□□□ -2.3
SPT8P38915 ALG13YGL047W 609 nt0.69□□□□□ -2.3
SPT8P38915 QCR9YGR183C 201 nt0.69□□□□□ -2.3
SPT8P38915 tW(UCA)QtW(UCA)Q 74 nt0.68□□□□□ -2.3
SPT8P38915 MCM10YIL150C 1716 nt0.68□□□□□ -2.3
SPT8P38915 YOR053WYOR053W 342 nt0.68□□□□□ -2.3
SPT8P38915 ASE1YOR058C 2658 nt0.66□□□□□ -2.3
SPT8P38915 YDR344CYDR344C 444 nt0.66□□□□□ -2.3
SPT8P38915 ISD11YER048W-A 285 nt0.66□□□□□ -2.3
SPT8P38915 VAR1Q0140 1197 nt0.66□□□□□ -2.3
SPT8P38915 YOR121CYOR121C 306 nt0.66□□□□□ -2.3
SPT8P38915 YCK3YER123W 1575 nt0.66□□□□□ -2.3
SPT8P38915 ULP2YIL031W 3105 nt0.65□□□□□ -2.3
SPT8P38915 YLL007CYLL007C 1998 nt0.65□□□□□ -2.31
SPT8P38915 DBP6YNR038W 1890 nt0.65□□□□□ -2.31
SPT8P38915 FMP27YLR454W 7887 nt0.64□□□□□ -2.31
SPT8P38915 YFR012W-AYFR012W-A 87 nt0.64□□□□□ -2.31
SPT8P38915 YLR334CYLR334C 381 nt0.64□□□□□ -2.31
SPT8P38915 IES4YOR189W 351 nt0.64□□□□□ -2.31
SPT8P38915 UTP10YJL109C 5310 nt0.64□□□□□ -2.31
SPT8P38915 ECM12YHR021W-A 456 nt0.63□□□□□ -2.31
SPT8P38915 YIR044CYIR044C 186 nt0.63□□□□□ -2.31
SPT8P38915 YAL068W-AYAL068W-A 255 nt0.63□□□□□ -2.31
SPT8P38915 YLR154W-FYLR154W-F 141 nt0.63□□□□□ -2.31
SPT8P38915 YMR001C-AYMR001C-A 231 nt0.63□□□□□ -2.31
SPT8P38915 CUL3YGR003W 2235 nt0.62□□□□□ -2.31
SPT8P38915 RPL35AYDL191W 363 nt0.62□□□□□ -2.31
SPT8P38915 YOR192C-BYOR192C-B 5313 nt0.62□□□□□ -2.31
SPT8P38915 NOP9YJL010C 2001 nt0.61□□□□□ -2.31
SPT8P38915 PMP1YCR024C-A 123 nt0.61□□□□□ -2.31
Retrieved 100 of 7,029 protein–RNA pairs in 8.3 ms