Protein–RNA interactions for Protein: P25046

ROX3, Mediator of RNA polymerase II transcription subunit 19, yeastyeast

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
ROX3P25046 HTB1YDR224C 396 nt-0.57□□□□□ -2.5
ROX3P25046 YJL135WYJL135W 318 nt-0.58□□□□□ -2.5
ROX3P25046 YLR399W-AYLR399W-A 105 nt-0.58□□□□□ -2.5
ROX3P25046 YBR064WYBR064W 429 nt-0.58□□□□□ -2.5
ROX3P25046 YBR206WYBR206W 324 nt-0.58□□□□□ -2.5
ROX3P25046 ASE1YOR058C 2658 nt-0.59□□□□□ -2.5
ROX3P25046 RRI2YOL117W 1938 nt-0.59□□□□□ -2.5
ROX3P25046 LIN1YHR156C 1023 nt-0.59□□□□□ -2.5
ROX3P25046 YJL007CYJL007C 315 nt-0.59□□□□□ -2.5
ROX3P25046 YLR198CYLR198C 360 nt-0.59□□□□□ -2.5
ROX3P25046 DIE2YGR227W 1578 nt-0.6□□□□□ -2.51
ROX3P25046 YDR269CYDR269C 324 nt-0.6□□□□□ -2.51
ROX3P25046 LRP1YHR081W 555 nt-0.6□□□□□ -2.51
ROX3P25046 ACF4YJR083C 930 nt-0.6□□□□□ -2.51
ROX3P25046 SPO21YOL091W 1830 nt-0.6□□□□□ -2.51
ROX3P25046 RSM23YGL129C 1353 nt-0.6□□□□□ -2.51
ROX3P25046 SNU56YDR240C 1479 nt-0.61□□□□□ -2.51
ROX3P25046 YKL023C-AYKL023C-A 228 nt-0.62□□□□□ -2.51
ROX3P25046 ATG16YMR159C 453 nt-0.62□□□□□ -2.51
ROX3P25046 YMR304C-AYMR304C-A 351 nt-0.62□□□□□ -2.51
ROX3P25046 YAP6YDR259C 1152 nt-0.63□□□□□ -2.51
ROX3P25046 YFR012W-AYFR012W-A 87 nt-0.63□□□□□ -2.51
ROX3P25046 YHR050W-AYHR050W-A 171 nt-0.63□□□□□ -2.51
ROX3P25046 NIP1YMR309C 2439 nt-0.64□□□□□ -2.51
ROX3P25046 RPM2YML091C 3609 nt-0.64□□□□□ -2.51
ROX3P25046 HTB2YBL002W 396 nt-0.65□□□□□ -2.51
ROX3P25046 YOR345CYOR345C 351 nt-0.65□□□□□ -2.51
ROX3P25046 PBI2YNL015W 228 nt-0.67□□□□□ -2.52
ROX3P25046 YCR022CYCR022C 345 nt-0.68□□□□□ -2.52
ROX3P25046 LOC1YFR001W 615 nt-0.68□□□□□ -2.52
ROX3P25046 POL32YJR043C 1053 nt-0.68□□□□□ -2.52
ROX3P25046 UBS1YBR165W 834 nt-0.68□□□□□ -2.52
ROX3P25046 YER188C-AYER188C-A 300 nt-0.69□□□□□ -2.52
ROX3P25046 CWC23YGL128C 852 nt-0.69□□□□□ -2.52
ROX3P25046 YIR044CYIR044C 186 nt-0.69□□□□□ -2.52
ROX3P25046 YKL068W-AYKL068W-A 237 nt-0.69□□□□□ -2.52
ROX3P25046 YPL205CYPL205C 345 nt-0.69□□□□□ -2.52
ROX3P25046 YPL060C-AYPL060C-A 3315 nt-0.69□□□□□ -2.52
ROX3P25046 YOL160WYOL160W 342 nt-0.7□□□□□ -2.52
ROX3P25046 YDR220CYDR220C 294 nt-0.71□□□□□ -2.52
ROX3P25046 YJR141WYJR141W 1044 nt-0.71□□□□□ -2.52
ROX3P25046 YNL146C-AYNL146C-A 195 nt-0.71□□□□□ -2.52
ROX3P25046 YOR248WYOR248W 303 nt-0.71□□□□□ -2.52
ROX3P25046 PTP2YOR208W 2253 nt-0.72□□□□□ -2.52
ROX3P25046 RPL22BYFL034C-A 369 nt-0.72□□□□□ -2.52
ROX3P25046 YHR131W-AYHR131W-A 246 nt-0.72□□□□□ -2.52
ROX3P25046 YBL008W-AYBL008W-A 240 nt-0.72□□□□□ -2.52
ROX3P25046 TIM13YGR181W 318 nt-0.73□□□□□ -2.53
ROX3P25046 tT(UGU)G1tT(UGU)G1 72 nt-0.73□□□□□ -2.53
ROX3P25046 tT(UGU)G2tT(UGU)G2 72 nt-0.73□□□□□ -2.53
ROX3P25046 tT(UGU)PtT(UGU)P 72 nt-0.73□□□□□ -2.53
ROX3P25046 YMR075C-AYMR075C-A 366 nt-0.73□□□□□ -2.53
ROX3P25046 YHL046W-AYHL046W-A 327 nt-0.74□□□□□ -2.53
ROX3P25046 ILM1YJR118C 612 nt-0.74□□□□□ -2.53
ROX3P25046 YMR013C-AYMR013C-A 150 nt-0.74□□□□□ -2.53
ROX3P25046 VAM3YOR106W 852 nt-0.74□□□□□ -2.53
ROX3P25046 YPL261CYPL261C 309 nt-0.74□□□□□ -2.53
ROX3P25046 SRB7YDR308C 423 nt-0.75□□□□□ -2.53
ROX3P25046 YNL067W-BYNL067W-B 141 nt-0.75□□□□□ -2.53
ROX3P25046 snR33snR33 183 nt-0.76□□□□□ -2.53
ROX3P25046 snR34snR34 203 nt-0.76□□□□□ -2.53
ROX3P25046 YLL006W-AYLL006W-A 177 nt-0.77□□□□□ -2.53
ROX3P25046 YML108WYML108W 318 nt-0.77□□□□□ -2.53
ROX3P25046 EMC4YGL231C 573 nt-0.78□□□□□ -2.53
ROX3P25046 YNL319WYNL319W 441 nt-0.78□□□□□ -2.53
ROX3P25046 IRC16YPR038W 360 nt-0.78□□□□□ -2.53
ROX3P25046 tN(GUU)QtN(GUU)Q 71 nt-0.79□□□□□ -2.54
ROX3P25046 YNR077CYNR077C 255 nt-0.79□□□□□ -2.54
ROX3P25046 YPR096CYPR096C 303 nt-0.79□□□□□ -2.54
ROX3P25046 YLR171WYLR171W 390 nt-0.8□□□□□ -2.54
ROX3P25046 YGL015CYGL015C 393 nt-0.81□□□□□ -2.54
ROX3P25046 ECL1YGR146C 636 nt-0.81□□□□□ -2.54
ROX3P25046 YGR270C-AYGR270C-A 219 nt-0.81□□□□□ -2.54
ROX3P25046 SEM1YDR363W-A 270 nt-0.82□□□□□ -2.54
ROX3P25046 DCP1YOL149W 696 nt-0.82□□□□□ -2.54
ROX3P25046 snR72snR72 98 nt-0.84□□□□□ -2.54
ROX3P25046 YGL239CYGL239C 315 nt-0.84□□□□□ -2.54
ROX3P25046 YKL202WYKL202W 582 nt-0.84□□□□□ -2.54
ROX3P25046 IPP1YBR011C 864 nt-0.84□□□□□ -2.54
ROX3P25046 YMR307C-AYMR307C-A 195 nt-0.86□□□□□ -2.55
ROX3P25046 YDL007C-AYDL007C-A 258 nt-0.88□□□□□ -2.55
ROX3P25046 BUD26YDR241W 288 nt-0.88□□□□□ -2.55
ROX3P25046 YGR115CYGR115C 780 nt-0.88□□□□□ -2.55
ROX3P25046 YCR018C-AYCR018C-A 255 nt-0.89□□□□□ -2.55
ROX3P25046 YCR038W-AYCR038W-A 126 nt-0.89□□□□□ -2.55
ROX3P25046 snR161snR161 161 nt-0.9□□□□□ -2.55
ROX3P25046 APQ13YJL075C 417 nt-0.91□□□□□ -2.56
ROX3P25046 YJL120WYJL120W 324 nt-0.91□□□□□ -2.56
ROX3P25046 ATG31YDR022C 591 nt-0.92□□□□□ -2.56
ROX3P25046 YIL071W-AYIL071W-A 477 nt-0.92□□□□□ -2.56
ROX3P25046 YLR287CYLR287C 1068 nt-0.92□□□□□ -2.56
ROX3P25046 snR36snR36 182 nt-0.92□□□□□ -2.56
ROX3P25046 snR51snR51 107 nt-0.92□□□□□ -2.56
ROX3P25046 COG6YNL041C 2520 nt-0.92□□□□□ -2.56
ROX3P25046 YDL185C-AYDL185C-A 228 nt-0.93□□□□□ -2.56
ROX3P25046 RPS20YHL015W 366 nt-0.93□□□□□ -2.56
ROX3P25046 MRPS8YMR158W 468 nt-0.93□□□□□ -2.56
ROX3P25046 YPR039WYPR039W 336 nt-0.93□□□□□ -2.56
ROX3P25046 PCF11YDR228C 1881 nt-0.95□□□□□ -2.56
ROX3P25046 YBL107W-AYBL107W-A 105 nt-0.95□□□□□ -2.56
Retrieved 100 of 7,029 protein–RNA pairs in 33.4 ms