Protein–RNA interactions for Protein: A0A0A0MS06

TRBV23-1, T-cell receptor beta variable 23-1 (non-functional) (Fragment), humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV23-1A0A0A0MS06 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC16.9■□□□□ 0.3
TRBV23-1A0A0A0MS06 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC16.9■□□□□ 0.3
TRBV23-1A0A0A0MS06 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC16.9■□□□□ 0.3
TRBV23-1A0A0A0MS06 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TRBV23-1A0A0A0MS06 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC16.9■□□□□ 0.3
TRBV23-1A0A0A0MS06 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC16.9■□□□□ 0.3
TRBV23-1A0A0A0MS06 CYP2T3P-201ENST00000601990 817 ntBASIC16.9■□□□□ 0.3
TRBV23-1A0A0A0MS06 GXYLT1P5-201ENST00000614548 1189 ntBASIC16.9■□□□□ 0.3
TRBV23-1A0A0A0MS06 AL589743.5-201ENST00000616611 1050 ntBASIC16.9■□□□□ 0.3
TRBV23-1A0A0A0MS06 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC16.9■□□□□ 0.3
TRBV23-1A0A0A0MS06 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRBV23-1A0A0A0MS06 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRBV23-1A0A0A0MS06 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRBV23-1A0A0A0MS06 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRBV23-1A0A0A0MS06 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRBV23-1A0A0A0MS06 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRBV23-1A0A0A0MS06 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
TRBV23-1A0A0A0MS06 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC16.9■□□□□ 0.3
TRBV23-1A0A0A0MS06 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRBV23-1A0A0A0MS06 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TRBV23-1A0A0A0MS06 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
TRBV23-1A0A0A0MS06 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
TRBV23-1A0A0A0MS06 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.3
TRBV23-1A0A0A0MS06 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC16.89■□□□□ 0.3
TRBV23-1A0A0A0MS06 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRBV23-1A0A0A0MS06 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
TRBV23-1A0A0A0MS06 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
TRBV23-1A0A0A0MS06 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC16.89■□□□□ 0.29
TRBV23-1A0A0A0MS06 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
TRBV23-1A0A0A0MS06 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRBV23-1A0A0A0MS06 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRBV23-1A0A0A0MS06 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRBV23-1A0A0A0MS06 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC16.89■□□□□ 0.29
TRBV23-1A0A0A0MS06 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
TRBV23-1A0A0A0MS06 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRBV23-1A0A0A0MS06 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRBV23-1A0A0A0MS06 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC16.89■□□□□ 0.29
TRBV23-1A0A0A0MS06 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
TRBV23-1A0A0A0MS06 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
TRBV23-1A0A0A0MS06 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRBV23-1A0A0A0MS06 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC16.89■□□□□ 0.29
TRBV23-1A0A0A0MS06 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC16.89■□□□□ 0.29
TRBV23-1A0A0A0MS06 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRBV23-1A0A0A0MS06 MIR2861-201ENST00000636310 90 ntBASIC16.89■□□□□ 0.29
TRBV23-1A0A0A0MS06 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRBV23-1A0A0A0MS06 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRBV23-1A0A0A0MS06 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRBV23-1A0A0A0MS06 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
TRBV23-1A0A0A0MS06 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRBV23-1A0A0A0MS06 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
TRBV23-1A0A0A0MS06 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC16.89■□□□□ 0.29
TRBV23-1A0A0A0MS06 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRBV23-1A0A0A0MS06 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
TRBV23-1A0A0A0MS06 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRBV23-1A0A0A0MS06 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRBV23-1A0A0A0MS06 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRBV23-1A0A0A0MS06 LINC01521-201ENST00000504184 1943 ntBASIC16.88■□□□□ 0.29
TRBV23-1A0A0A0MS06 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRBV23-1A0A0A0MS06 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TRBV23-1A0A0A0MS06 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRBV23-1A0A0A0MS06 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRBV23-1A0A0A0MS06 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRBV23-1A0A0A0MS06 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRBV23-1A0A0A0MS06 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRBV23-1A0A0A0MS06 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC16.88■□□□□ 0.29
TRBV23-1A0A0A0MS06 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRBV23-1A0A0A0MS06 KRT18P68-201ENST00000392293 1000 ntBASIC16.88■□□□□ 0.29
TRBV23-1A0A0A0MS06 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TRBV23-1A0A0A0MS06 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC16.88■□□□□ 0.29
TRBV23-1A0A0A0MS06 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC16.88■□□□□ 0.29
TRBV23-1A0A0A0MS06 MAP2K4P1-201ENST00000438453 1195 ntBASIC16.88■□□□□ 0.29
TRBV23-1A0A0A0MS06 TSPY6P-201ENST00000448518 926 ntBASIC16.88■□□□□ 0.29
TRBV23-1A0A0A0MS06 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC16.88■□□□□ 0.29
TRBV23-1A0A0A0MS06 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC16.88■□□□□ 0.29
TRBV23-1A0A0A0MS06 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC16.88■□□□□ 0.29
TRBV23-1A0A0A0MS06 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC16.88■□□□□ 0.29
TRBV23-1A0A0A0MS06 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC16.88■□□□□ 0.29
TRBV23-1A0A0A0MS06 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
TRBV23-1A0A0A0MS06 WT1-AS_3.1-201ENST00000613262 234 ntBASIC16.88■□□□□ 0.29
TRBV23-1A0A0A0MS06 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
TRBV23-1A0A0A0MS06 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TRBV23-1A0A0A0MS06 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC16.88■□□□□ 0.29
TRBV23-1A0A0A0MS06 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
TRBV23-1A0A0A0MS06 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TRBV23-1A0A0A0MS06 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRBV23-1A0A0A0MS06 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TRBV23-1A0A0A0MS06 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRBV23-1A0A0A0MS06 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRBV23-1A0A0A0MS06 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
TRBV23-1A0A0A0MS06 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC16.87■□□□□ 0.29
TRBV23-1A0A0A0MS06 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TRBV23-1A0A0A0MS06 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TRBV23-1A0A0A0MS06 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRBV23-1A0A0A0MS06 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC16.87■□□□□ 0.29
TRBV23-1A0A0A0MS06 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC16.87■□□□□ 0.29
TRBV23-1A0A0A0MS06 FZD10-202ENST00000539839 3282 ntBASIC16.87■□□□□ 0.29
TRBV23-1A0A0A0MS06 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC16.87■□□□□ 0.29
TRBV23-1A0A0A0MS06 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRBV23-1A0A0A0MS06 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
TRBV23-1A0A0A0MS06 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms