Protein–RNA interactions for Protein: Q3E7X9

RPS28A, 40S ribosomal protein S28-A, yeastyeast

Predicted RBP Predictions only

Length 67 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPS28AQ3E7X9 AFR1YDR085C 1863 nt0.04□□□□□ -2.4
RPS28AQ3E7X9 UBP3YER151C 2739 nt0.04□□□□□ -2.4
RPS28AQ3E7X9 snR5snR5 204 nt0.03□□□□□ -2.4
RPS28AQ3E7X9 YER087C-AYER087C-A 552 nt0.03□□□□□ -2.4
RPS28AQ3E7X9 URM1YIL008W 300 nt0.03□□□□□ -2.4
RPS28AQ3E7X9 YBR063CYBR063C 1215 nt0.03□□□□□ -2.4
RPS28AQ3E7X9 YPL185WYPL185W 396 nt0.02□□□□□ -2.41
RPS28AQ3E7X9 YJL135WYJL135W 318 nt0.01□□□□□ -2.41
RPS28AQ3E7X9 YDR344CYDR344C 444 nt-0.01□□□□□ -2.41
RPS28AQ3E7X9 YGL239CYGL239C 315 nt-0.01□□□□□ -2.41
RPS28AQ3E7X9 SPO13YHR014W 876 nt-0.01□□□□□ -2.41
RPS28AQ3E7X9 COX12YLR038C 252 nt-0.01□□□□□ -2.41
RPS28AQ3E7X9 YCL002CYCL002C 792 nt-0.01□□□□□ -2.41
RPS28AQ3E7X9 YGL230CYGL230C 444 nt-0.02□□□□□ -2.41
RPS28AQ3E7X9 VMA21YGR105W 234 nt-0.02□□□□□ -2.41
RPS28AQ3E7X9 RTT102YGR275W 474 nt-0.02□□□□□ -2.41
RPS28AQ3E7X9 BIG1YHR101C 1008 nt-0.02□□□□□ -2.41
RPS28AQ3E7X9 PHS1YJL097W 654 nt-0.02□□□□□ -2.41
RPS28AQ3E7X9 YMR141W-AYMR141W-A 225 nt-0.02□□□□□ -2.41
RPS28AQ3E7X9 YNL050CYNL050C 813 nt-0.02□□□□□ -2.41
RPS28AQ3E7X9 CDC33YOL139C 642 nt-0.02□□□□□ -2.41
RPS28AQ3E7X9 YPL261CYPL261C 309 nt-0.02□□□□□ -2.41
RPS28AQ3E7X9 YPR039WYPR039W 336 nt-0.02□□□□□ -2.41
RPS28AQ3E7X9 HAL9YOL089C 3093 nt-0.03□□□□□ -2.41
RPS28AQ3E7X9 PRP5YBR237W 2550 nt-0.03□□□□□ -2.41
RPS28AQ3E7X9 MND1YGL183C 660 nt-0.03□□□□□ -2.41
RPS28AQ3E7X9 YKL068W-AYKL068W-A 237 nt-0.03□□□□□ -2.41
RPS28AQ3E7X9 MRPL32YCR003W 552 nt-0.04□□□□□ -2.42
RPS28AQ3E7X9 YER175W-AYER175W-A 165 nt-0.04□□□□□ -2.42
RPS28AQ3E7X9 YIR018C-AYIR018C-A 138 nt-0.04□□□□□ -2.42
RPS28AQ3E7X9 AFB1YLR040C 675 nt-0.04□□□□□ -2.42
RPS28AQ3E7X9 UBX4YMR067C 1251 nt-0.04□□□□□ -2.42
RPS28AQ3E7X9 IRC16YPR038W 360 nt-0.04□□□□□ -2.42
RPS28AQ3E7X9 SCEIQ0160 708 nt-0.05□□□□□ -2.42
RPS28AQ3E7X9 YIR044CYIR044C 186 nt-0.05□□□□□ -2.42
RPS28AQ3E7X9 ILM1YJR118C 612 nt-0.05□□□□□ -2.42
RPS28AQ3E7X9 YOR053WYOR053W 342 nt-0.05□□□□□ -2.42
RPS28AQ3E7X9 YBR076C-AYBR076C-A 267 nt-0.05□□□□□ -2.42
RPS28AQ3E7X9 YMR160WYMR160W 2451 nt-0.05□□□□□ -2.42
RPS28AQ3E7X9 snR9snR9 187 nt-0.06□□□□□ -2.42
RPS28AQ3E7X9 INP2YMR163C 2118 nt-0.06□□□□□ -2.42
RPS28AQ3E7X9 OST1YJL002C 1431 nt-0.06□□□□□ -2.42
RPS28AQ3E7X9 EFR3YMR212C 2349 nt-0.07□□□□□ -2.42
RPS28AQ3E7X9 ASE1YOR058C 2658 nt-0.07□□□□□ -2.42
RPS28AQ3E7X9 YOL160WYOL160W 342 nt-0.07□□□□□ -2.42
RPS28AQ3E7X9 snR190snR190 190 nt-0.07□□□□□ -2.42
RPS28AQ3E7X9 YPP1YGR198W 2454 nt-0.07□□□□□ -2.42
RPS28AQ3E7X9 YDL187CYDL187C 330 nt-0.08□□□□□ -2.42
RPS28AQ3E7X9 RPL35AYDL191W 363 nt-0.08□□□□□ -2.42
RPS28AQ3E7X9 PRP21YJL203W 843 nt-0.08□□□□□ -2.42
RPS28AQ3E7X9 YBL108WYBL108W 306 nt-0.08□□□□□ -2.42
RPS28AQ3E7X9 UBS1YBR165W 834 nt-0.08□□□□□ -2.42
RPS28AQ3E7X9 YDR029WYDR029W 315 nt-0.09□□□□□ -2.42
RPS28AQ3E7X9 tC(GCA)BtC(GCA)B 72 nt-0.09□□□□□ -2.42
RPS28AQ3E7X9 tC(GCA)GtC(GCA)G 72 nt-0.09□□□□□ -2.42
RPS28AQ3E7X9 tC(GCA)P1tC(GCA)P1 72 nt-0.09□□□□□ -2.42
RPS28AQ3E7X9 tC(GCA)P2tC(GCA)P2 72 nt-0.09□□□□□ -2.42
RPS28AQ3E7X9 ECM9YKR004C 1134 nt-0.09□□□□□ -2.42
RPS28AQ3E7X9 RAD34YDR314C 2079 nt-0.09□□□□□ -2.42
RPS28AQ3E7X9 YOR192C-BYOR192C-B 5313 nt-0.1□□□□□ -2.42
RPS28AQ3E7X9 YKL202WYKL202W 582 nt-0.1□□□□□ -2.43
RPS28AQ3E7X9 YLR232WYLR232W 348 nt-0.1□□□□□ -2.43
RPS28AQ3E7X9 YOR072W-AYOR072W-A 249 nt-0.1□□□□□ -2.43
RPS28AQ3E7X9 YDR250CYDR250C 276 nt-0.11□□□□□ -2.43
RPS28AQ3E7X9 YER023C-AYER023C-A 213 nt-0.11□□□□□ -2.43
RPS28AQ3E7X9 YLR198CYLR198C 360 nt-0.11□□□□□ -2.43
RPS28AQ3E7X9 TMA10YLR327C 261 nt-0.11□□□□□ -2.43
RPS28AQ3E7X9 snR13snR13 124 nt-0.11□□□□□ -2.43
RPS28AQ3E7X9 YBR064WYBR064W 429 nt-0.11□□□□□ -2.43
RPS28AQ3E7X9 YPR160W-AYPR160W-A 81 nt-0.11□□□□□ -2.43
RPS28AQ3E7X9 BIR1YJR089W 2865 nt-0.11□□□□□ -2.43
RPS28AQ3E7X9 COG8YML071C 1824 nt-0.11□□□□□ -2.43
RPS28AQ3E7X9 RCO1YMR075W 2055 nt-0.12□□□□□ -2.43
RPS28AQ3E7X9 OST4YDL232W 111 nt-0.12□□□□□ -2.43
RPS28AQ3E7X9 OLI1Q0130 231 nt-0.12□□□□□ -2.43
RPS28AQ3E7X9 RPB10YOR210W 213 nt-0.12□□□□□ -2.43
RPS28AQ3E7X9 YDR133CYDR133C 336 nt-0.13□□□□□ -2.43
RPS28AQ3E7X9 SLX9YGR081C 633 nt-0.13□□□□□ -2.43
RPS28AQ3E7X9 RPS27AYKL156W 249 nt-0.13□□□□□ -2.43
RPS28AQ3E7X9 YMR254CYMR254C 309 nt-0.13□□□□□ -2.43
RPS28AQ3E7X9 MCM10YIL150C 1716 nt-0.13□□□□□ -2.43
RPS28AQ3E7X9 CUL3YGR003W 2235 nt-0.14□□□□□ -2.43
RPS28AQ3E7X9 MRPS8YMR158W 468 nt-0.14□□□□□ -2.43
RPS28AQ3E7X9 PBI2YNL015W 228 nt-0.14□□□□□ -2.43
RPS28AQ3E7X9 PAA1YDR071C 576 nt-0.15□□□□□ -2.43
RPS28AQ3E7X9 YAP6YDR259C 1152 nt-0.15□□□□□ -2.43
RPS28AQ3E7X9 YER135CYER135C 393 nt-0.15□□□□□ -2.43
RPS28AQ3E7X9 ULI1YFR026C 510 nt-0.15□□□□□ -2.43
RPS28AQ3E7X9 INA22YIR024C 651 nt-0.15□□□□□ -2.43
RPS28AQ3E7X9 AI1Q0050 2505 nt-0.16□□□□□ -2.43
RPS28AQ3E7X9 PRP42YDR235W 1635 nt-0.16□□□□□ -2.43
RPS28AQ3E7X9 HUR1YGL168W 333 nt-0.16□□□□□ -2.44
RPS28AQ3E7X9 YJR087WYJR087W 351 nt-0.16□□□□□ -2.44
RPS28AQ3E7X9 YAL067W-AYAL067W-A 228 nt-0.16□□□□□ -2.44
RPS28AQ3E7X9 YLR399W-AYLR399W-A 105 nt-0.16□□□□□ -2.44
RPS28AQ3E7X9 ULP2YIL031W 3105 nt-0.16□□□□□ -2.44
RPS28AQ3E7X9 MRPL50YNR022C 420 nt-0.17□□□□□ -2.44
RPS28AQ3E7X9 SSS1YDR086C 243 nt-0.18□□□□□ -2.44
RPS28AQ3E7X9 YIL066W-AYIL066W-A 444 nt-0.19□□□□□ -2.44
RPS28AQ3E7X9 YOR186C-AYOR186C-A 210 nt-0.19□□□□□ -2.44
Retrieved 100 of 7,029 protein–RNA pairs in 12.5 ms