Protein–RNA interactions for Protein: Q01560

NPL3, Nucleolar protein 3, yeastyeast

Known RBP RIP-Chip data

Length 414 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
NPL3Q01560 TFC8YPL007C 1767 nt2.5□□□□□ -2.01
NPL3Q01560 LYS14YDR034C 2373 nt2.49□□□□□ -2.01
NPL3Q01560 PAU18YLL064C 363 nt2.49□□□□□ -2.01
NPL3Q01560 PAU6YNR076W 363 nt2.49□□□□□ -2.01
NPL3Q01560 VPS13YLL040C 9435 nt2.49□□□□□ -2.01
NPL3Q01560 REV3YPL167C 4515 nt2.49□□□□□ -2.01
NPL3Q01560 SGM1YJR134C 2124 nt2.48□□□□□ -2.01
NPL3Q01560 YEL073CYEL073C 324 nt2.48□□□□□ -2.01
NPL3Q01560 TRL1YJL087C 2484 nt2.47□□□□□ -2.01
NPL3Q01560 PMP1YCR024C-A 123 nt2.46□□□□□ -2.02
NPL3Q01560 YHR071C-AYHR071C-A 321 nt2.46□□□□□ -2.02
NPL3Q01560 YMR326CYMR326C 309 nt2.46□□□□□ -2.02
NPL3Q01560 KTI11YBL071W-A 249 nt2.46□□□□□ -2.02 RIP-Chip
NPL3Q01560 GIP3YPL137C 3831 nt2.46□□□□□ -2.02
NPL3Q01560 YCL046WYCL046W 324 nt2.46□□□□□ -2.02
NPL3Q01560 CDC60YPL160W 3273 nt2.46□□□□□ -2.02
NPL3Q01560 YDR239CYDR239C 2364 nt2.45□□□□□ -2.02
NPL3Q01560 RAV1YJR033C 4074 nt2.45□□□□□ -2.02
NPL3Q01560 YDR003W-AYDR003W-A 123 nt2.45□□□□□ -2.02 RIP-Chip
NPL3Q01560 TFB5YDR079C-A 219 nt2.45□□□□□ -2.02 RIP-Chip
NPL3Q01560 ECM12YHR021W-A 456 nt2.45□□□□□ -2.02
NPL3Q01560 YHR210CYHR210C 1026 nt2.45□□□□□ -2.02
NPL3Q01560 YOR218CYOR218C 420 nt2.45□□□□□ -2.02
NPL3Q01560 ACM1YPL267W 630 nt2.45□□□□□ -2.02
NPL3Q01560 DCP2YNL118C 2913 nt2.44□□□□□ -2.02
NPL3Q01560 snR72snR72 98 nt2.44□□□□□ -2.02
NPL3Q01560 YDR544CYDR544C 429 nt2.44□□□□□ -2.02
NPL3Q01560 STE11YLR362W 2154 nt2.44□□□□□ -2.02
NPL3Q01560 YDR341CYDR341C 1824 nt2.44□□□□□ -2.02
NPL3Q01560 ZRG17YNR039C 1818 nt2.44□□□□□ -2.02
NPL3Q01560 TIM9YEL020W-A 264 nt2.43□□□□□ -2.02 RIP-Chip
NPL3Q01560 YIL071W-AYIL071W-A 477 nt2.43□□□□□ -2.02
NPL3Q01560 RPL33BYOR234C 324 nt2.43□□□□□ -2.02 RIP-Chip
NPL3Q01560 YEF3YLR249W 3135 nt2.43□□□□□ -2.02
NPL3Q01560 YOL098CYOL098C 3114 nt2.43□□□□□ -2.02
NPL3Q01560 SIR3YLR442C 2937 nt2.42□□□□□ -2.02
NPL3Q01560 PDR11YIL013C 4236 nt2.42□□□□□ -2.02
NPL3Q01560 BRP1YGL007W 378 nt2.42□□□□□ -2.02
NPL3Q01560 YOR345CYOR345C 351 nt2.42□□□□□ -2.02
NPL3Q01560 YCL001W-BYCL001W-B 255 nt2.42□□□□□ -2.02
NPL3Q01560 UBP1YDL122W 2430 nt2.42□□□□□ -2.02
NPL3Q01560 IRA2YOL081W 9240 nt2.42□□□□□ -2.02
NPL3Q01560 ARP8YOR141C 2646 nt2.41□□□□□ -2.02
NPL3Q01560 RTT107YHR154W 3213 nt2.41□□□□□ -2.02
NPL3Q01560 YOR055WYOR055W 435 nt2.41□□□□□ -2.02
NPL3Q01560 MCM10YIL150C 1716 nt2.41□□□□□ -2.02
NPL3Q01560 ZIP1YDR285W 2628 nt2.41□□□□□ -2.02
NPL3Q01560 MLH1YMR167W 2310 nt2.41□□□□□ -2.02
NPL3Q01560 PET309YLR067C 2898 nt2.4□□□□□ -2.02
NPL3Q01560 PHO91YNR013C 2685 nt2.4□□□□□ -2.02
NPL3Q01560 MPT5YGL178W 2580 nt2.4□□□□□ -2.02
NPL3Q01560 YDL247W-AYDL247W-A 75 nt2.4□□□□□ -2.03 RIP-Chip
NPL3Q01560 YIR044CYIR044C 186 nt2.4□□□□□ -2.03 RIP-Chip
NPL3Q01560 YKR075W-AYKR075W-A 270 nt2.4□□□□□ -2.03
NPL3Q01560 NUP170YBL079W 4509 nt2.4□□□□□ -2.03
NPL3Q01560 NAM7YMR080C 2916 nt2.4□□□□□ -2.03
NPL3Q01560 SYH1YPL105C 2550 nt2.4□□□□□ -2.03
NPL3Q01560 MAK10YEL053C 2202 nt2.4□□□□□ -2.03
NPL3Q01560 NOP14YDL148C 2433 nt2.39□□□□□ -2.03
NPL3Q01560 YIL156W-BYIL156W-B 222 nt2.39□□□□□ -2.03
NPL3Q01560 RTT101YJL047C 2529 nt2.39□□□□□ -2.03
NPL3Q01560 SEC16YPL085W 6588 nt2.39□□□□□ -2.03 RIP-Chip
NPL3Q01560 ELG1YOR144C 2376 nt2.38□□□□□ -2.03
NPL3Q01560 NIP100YPL174C 2607 nt2.38□□□□□ -2.03
NPL3Q01560 YOR072W-BYOR072W-B 162 nt2.37□□□□□ -2.03
NPL3Q01560 SRP14YDL092W 441 nt2.36□□□□□ -2.03
NPL3Q01560 RPL37BYDR500C 267 nt2.36□□□□□ -2.03 RIP-Chip
NPL3Q01560 YBL012CYBL012C 402 nt2.36□□□□□ -2.03
NPL3Q01560 SAS3YBL052C 2496 nt2.36□□□□□ -2.03
NPL3Q01560 PIG1YLR273C 1947 nt2.36□□□□□ -2.03
NPL3Q01560 MSB1YOR188W 3414 nt2.36□□□□□ -2.03
NPL3Q01560 YPR097WYPR097W 3222 nt2.36□□□□□ -2.03
NPL3Q01560 SCD5YOR329C 2619 nt2.36□□□□□ -2.03
NPL3Q01560 SCP160YJL080C 3669 nt2.35□□□□□ -2.03
NPL3Q01560 TOR1YJR066W 7413 nt2.35□□□□□ -2.03
NPL3Q01560 YHR217CYHR217C 462 nt2.35□□□□□ -2.03
NPL3Q01560 SVL3YPL032C 2478 nt2.35□□□□□ -2.03
NPL3Q01560 CHC1YGL206C 4962 nt2.34□□□□□ -2.03
NPL3Q01560 COY1YKL179C 2040 nt2.34□□□□□ -2.03
NPL3Q01560 YDR182W-AYDR182W-A 204 nt2.34□□□□□ -2.03
NPL3Q01560 YKL165C-AYKL165C-A 234 nt2.34□□□□□ -2.03 RIP-Chip
NPL3Q01560 YOR108C-AYOR108C-A 210 nt2.34□□□□□ -2.03
NPL3Q01560 SPO21YOL091W 1830 nt2.33□□□□□ -2.04
NPL3Q01560 SPC98YNL126W 2541 nt2.33□□□□□ -2.04
NPL3Q01560 PMP2YEL017C-A 132 nt2.33□□□□□ -2.04
NPL3Q01560 YHL015W-AYHL015W-A 84 nt2.33□□□□□ -2.04
NPL3Q01560 YMR242W-AYMR242W-A 90 nt2.33□□□□□ -2.04
NPL3Q01560 YOR314W-AYOR314W-A 111 nt2.33□□□□□ -2.04
NPL3Q01560 IST2YBR086C 2841 nt2.32□□□□□ -2.04
NPL3Q01560 ZIP2YGL249W 2115 nt2.32□□□□□ -2.04
NPL3Q01560 YCR087C-AYCR087C-A 462 nt2.32□□□□□ -2.04 RIP-Chip
NPL3Q01560 YJL022WYJL022W 309 nt2.32□□□□□ -2.04
NPL3Q01560 YNL103W-AYNL103W-A 90 nt2.32□□□□□ -2.04
NPL3Q01560 BNI1YNL271C 5862 nt2.32□□□□□ -2.04
NPL3Q01560 CTR9YOL145C 3234 nt2.32□□□□□ -2.04
NPL3Q01560 MSC6YOR354C 2079 nt2.32□□□□□ -2.04
NPL3Q01560 HSH155YMR288W 2916 nt2.31□□□□□ -2.04
NPL3Q01560 HMI1YOL095C 2121 nt2.31□□□□□ -2.04
NPL3Q01560 SSD1YDR293C 3753 nt2.31□□□□□ -2.04
NPL3Q01560 IRE1YHR079C 3348 nt2.3□□□□□ -2.04
Retrieved 100 of 7,029 protein–RNA pairs in 21.9 ms