Protein–RNA interactions for Protein: P40890

VTH2, VPS10 homolog 2, yeastyeast

Predictions only

Length 1,549 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VTH2P40890 COX8YLR395C 237 nt-0.66□□□□□ -2.52
VTH2P40890 YOL118CYOL118C 309 nt-0.66□□□□□ -2.52
VTH2P40890 COY1YKL179C 2040 nt-0.67□□□□□ -2.52
VTH2P40890 RFA3YJL173C 369 nt-0.67□□□□□ -2.52
VTH2P40890 OST4YDL232W 111 nt-0.68□□□□□ -2.52
VTH2P40890 ECM9YKR004C 1134 nt-0.68□□□□□ -2.52
VTH2P40890 CDC33YOL139C 642 nt-0.68□□□□□ -2.52
VTH2P40890 YKL115CYKL115C 393 nt-0.69□□□□□ -2.52
VTH2P40890 GIM5YML094W 492 nt-0.69□□□□□ -2.52
VTH2P40890 YBR051WYBR051W 351 nt-0.69□□□□□ -2.52
VTH2P40890 GOS1YHL031C 672 nt-0.69□□□□□ -2.52
VTH2P40890 NFU1YKL040C 771 nt-0.69□□□□□ -2.52
VTH2P40890 YNL146WYNL146W 303 nt-0.69□□□□□ -2.52
VTH2P40890 YER038W-AYER038W-A 381 nt-0.7□□□□□ -2.52
VTH2P40890 YFR057WYFR057W 456 nt-0.7□□□□□ -2.52
VTH2P40890 GPG1YGL121C 381 nt-0.7□□□□□ -2.52
VTH2P40890 YAL067W-AYAL067W-A 228 nt-0.7□□□□□ -2.52
VTH2P40890 ASE1YOR058C 2658 nt-0.71□□□□□ -2.52
VTH2P40890 NIP1YMR309C 2439 nt-0.71□□□□□ -2.52
VTH2P40890 HTB1YDR224C 396 nt-0.71□□□□□ -2.52
VTH2P40890 HTB2YBL002W 396 nt-0.71□□□□□ -2.52
VTH2P40890 PRP21YJL203W 843 nt-0.72□□□□□ -2.52
VTH2P40890 ARV1YLR242C 966 nt-0.73□□□□□ -2.53
VTH2P40890 YPL044CYPL044C 549 nt-0.73□□□□□ -2.53
VTH2P40890 DIE2YGR227W 1578 nt-0.73□□□□□ -2.53
VTH2P40890 NUP82YJL061W 2142 nt-0.73□□□□□ -2.53
VTH2P40890 AFB1YLR040C 675 nt-0.74□□□□□ -2.53
VTH2P40890 LSO2YGR169C-A 279 nt-0.74□□□□□ -2.53
VTH2P40890 RFX1YLR176C 2436 nt-0.75□□□□□ -2.53
VTH2P40890 MCM10YIL150C 1716 nt-0.75□□□□□ -2.53
VTH2P40890 MMS21YEL019C 804 nt-0.76□□□□□ -2.53
VTH2P40890 YGL204CYGL204C 306 nt-0.76□□□□□ -2.53
VTH2P40890 tT(UGU)G1tT(UGU)G1 72 nt-0.76□□□□□ -2.53
VTH2P40890 tT(UGU)G2tT(UGU)G2 72 nt-0.76□□□□□ -2.53
VTH2P40890 tT(UGU)PtT(UGU)P 72 nt-0.76□□□□□ -2.53
VTH2P40890 YJR141WYJR141W 1044 nt-0.76□□□□□ -2.53
VTH2P40890 YKL023C-AYKL023C-A 228 nt-0.76□□□□□ -2.53
VTH2P40890 SMD2YLR275W 333 nt-0.76□□□□□ -2.53
VTH2P40890 YMR141W-AYMR141W-A 225 nt-0.76□□□□□ -2.53
VTH2P40890 YPR160W-AYPR160W-A 81 nt-0.76□□□□□ -2.53
VTH2P40890 YDL068WYDL068W 330 nt-0.77□□□□□ -2.53
VTH2P40890 RMD6YEL072W 696 nt-0.77□□□□□ -2.53
VTH2P40890 YPL185WYPL185W 396 nt-0.77□□□□□ -2.53
VTH2P40890 snR33snR33 183 nt-0.77□□□□□ -2.53
VTH2P40890 YDL152WYDL152W 366 nt-0.78□□□□□ -2.53
VTH2P40890 YGR204C-AYGR204C-A 114 nt-0.78□□□□□ -2.53
VTH2P40890 YPL205CYPL205C 345 nt-0.79□□□□□ -2.54
VTH2P40890 BI3Q0115 1554 nt-0.79□□□□□ -2.54
VTH2P40890 YCR022CYCR022C 345 nt-0.8□□□□□ -2.54
VTH2P40890 TDA2YER071C 381 nt-0.81□□□□□ -2.54
VTH2P40890 YNL162W-AYNL162W-A 219 nt-0.81□□□□□ -2.54
VTH2P40890 YBR064WYBR064W 429 nt-0.81□□□□□ -2.54
VTH2P40890 YLL032CYLL032C 2478 nt-0.82□□□□□ -2.54
VTH2P40890 YOR345CYOR345C 351 nt-0.83□□□□□ -2.54
VTH2P40890 GSP1YLR293C 660 nt-0.84□□□□□ -2.54
VTH2P40890 YDR008CYDR008C 351 nt-0.84□□□□□ -2.54
VTH2P40890 RPL29YFR032C-A 180 nt-0.84□□□□□ -2.54
VTH2P40890 YJL120WYJL120W 324 nt-0.84□□□□□ -2.54
VTH2P40890 MRPL31YKL138C 396 nt-0.84□□□□□ -2.54
VTH2P40890 YLR399W-AYLR399W-A 105 nt-0.84□□□□□ -2.54
VTH2P40890 YMR158C-AYMR158C-A 138 nt-0.84□□□□□ -2.54
VTH2P40890 TFB6YOR352W 1032 nt-0.84□□□□□ -2.54
VTH2P40890 YJR079WYJR079W 330 nt-0.85□□□□□ -2.55
VTH2P40890 YPR096CYPR096C 303 nt-0.85□□□□□ -2.55
VTH2P40890 ATP20YPR020W 348 nt-0.86□□□□□ -2.55
VTH2P40890 BI4Q0120 1917 nt-0.87□□□□□ -2.55
VTH2P40890 snR44snR44 211 nt-0.87□□□□□ -2.55
VTH2P40890 YFR012W-AYFR012W-A 87 nt-0.88□□□□□ -2.55
VTH2P40890 YBR223W-AYBR223W-A 120 nt-0.88□□□□□ -2.55
VTH2P40890 RUB1YDR139C 234 nt-0.89□□□□□ -2.55
VTH2P40890 COG6YNL041C 2520 nt-0.89□□□□□ -2.55
VTH2P40890 ATC1YDR184C 885 nt-0.89□□□□□ -2.55
VTH2P40890 YGL042CYGL042C 306 nt-0.89□□□□□ -2.55
VTH2P40890 YLR271WYLR271W 825 nt-0.89□□□□□ -2.55
VTH2P40890 YMR075C-AYMR075C-A 366 nt-0.89□□□□□ -2.55
VTH2P40890 MFA2YNL145W 117 nt-0.89□□□□□ -2.55
VTH2P40890 YPL119C-AYPL119C-A 264 nt-0.89□□□□□ -2.55
VTH2P40890 YPR142CYPR142C 564 nt-0.89□□□□□ -2.55
VTH2P40890 YBR121C-AYBR121C-A 159 nt-0.9□□□□□ -2.55
VTH2P40890 SEM1YDR363W-A 270 nt-0.91□□□□□ -2.56
VTH2P40890 CMS1YLR003C 876 nt-0.91□□□□□ -2.56
VTH2P40890 YMR153C-AYMR153C-A 336 nt-0.91□□□□□ -2.56
VTH2P40890 YNL067W-BYNL067W-B 141 nt-0.91□□□□□ -2.56
VTH2P40890 YPR099CYPR099C 357 nt-0.91□□□□□ -2.56
VTH2P40890 SUS1YBR111W-A 291 nt-0.91□□□□□ -2.56
VTH2P40890 PAN3YKL025C 2040 nt-0.92□□□□□ -2.56
VTH2P40890 YGR115CYGR115C 780 nt-0.92□□□□□ -2.56
VTH2P40890 IPP1YBR011C 864 nt-0.92□□□□□ -2.56
VTH2P40890 PAA1YDR071C 576 nt-0.93□□□□□ -2.56
VTH2P40890 YHR131W-AYHR131W-A 246 nt-0.93□□□□□ -2.56
VTH2P40890 YLR146W-AYLR146W-A 189 nt-0.93□□□□□ -2.56
VTH2P40890 MRPS8YMR158W 468 nt-0.93□□□□□ -2.56
VTH2P40890 YOR248WYOR248W 303 nt-0.93□□□□□ -2.56
VTH2P40890 snR24snR24 89 nt-0.93□□□□□ -2.56
VTH2P40890 ZIP2YGL249W 2115 nt-0.93□□□□□ -2.56
VTH2P40890 15S_rRNA15S_rRNA 1649 nt-0.94□□□□□ -2.56
VTH2P40890 YNL319WYNL319W 441 nt-0.94□□□□□ -2.56
VTH2P40890 SNU56YDR240C 1479 nt-0.95□□□□□ -2.56
VTH2P40890 snR79snR79 84 nt-0.95□□□□□ -2.56
VTH2P40890 YAP6YDR259C 1152 nt-0.95□□□□□ -2.56
Retrieved 100 of 7,029 protein–RNA pairs in 71.1 ms