Protein–RNA interactions for Protein: P40089

LSM5, U6 snRNA-associated Sm-like protein LSm5, yeastyeast

Known RBP Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
LSM5P40089 YER079WYER079W 633 nt1.38□□□□□ -2.19
LSM5P40089 snR51snR51 107 nt1.38□□□□□ -2.19
LSM5P40089 ENV11YGR071C 2583 nt1.38□□□□□ -2.19
LSM5P40089 RRT15YLR162W-A 189 nt1.37□□□□□ -2.19
LSM5P40089 YPR063CYPR063C 423 nt1.37□□□□□ -2.19
LSM5P40089 SLI15YBR156C 2097 nt1.36□□□□□ -2.19
LSM5P40089 YLL020CYLL020C 306 nt1.36□□□□□ -2.19
LSM5P40089 YLR154W-FYLR154W-F 141 nt1.36□□□□□ -2.19
LSM5P40089 BSC3YLR465C 309 nt1.36□□□□□ -2.19
LSM5P40089 YMR141W-AYMR141W-A 225 nt1.36□□□□□ -2.19
LSM5P40089 YMR290W-AYMR290W-A 348 nt1.36□□□□□ -2.19
LSM5P40089 PET127YOR017W 2403 nt1.35□□□□□ -2.19
LSM5P40089 SWI4YER111C 3282 nt1.35□□□□□ -2.19
LSM5P40089 CDC25YLR310C 4770 nt1.35□□□□□ -2.19
LSM5P40089 tH(GUG)E1tH(GUG)E1 72 nt1.34□□□□□ -2.19
LSM5P40089 tH(GUG)E2tH(GUG)E2 72 nt1.34□□□□□ -2.19
LSM5P40089 tH(GUG)G1tH(GUG)G1 72 nt1.34□□□□□ -2.19
LSM5P40089 tH(GUG)G2tH(GUG)G2 72 nt1.34□□□□□ -2.19
LSM5P40089 tH(GUG)HtH(GUG)H 72 nt1.34□□□□□ -2.19
LSM5P40089 tH(GUG)KtH(GUG)K 72 nt1.34□□□□□ -2.19
LSM5P40089 tH(GUG)MtH(GUG)M 72 nt1.34□□□□□ -2.19
LSM5P40089 tQ(UUG)E2tQ(UUG)E2 72 nt1.34□□□□□ -2.19
LSM5P40089 RRT1YBL048W 312 nt1.34□□□□□ -2.19
LSM5P40089 INP2YMR163C 2118 nt1.34□□□□□ -2.2
LSM5P40089 YGR109W-BYGR109W-B 4644 nt1.33□□□□□ -2.2
LSM5P40089 MMS4YBR098W 2076 nt1.33□□□□□ -2.2
LSM5P40089 YOL160WYOL160W 342 nt1.33□□□□□ -2.2
LSM5P40089 snR14snR14 160 nt1.33□□□□□ -2.2
LSM5P40089 LEE1YPL054W 906 nt1.33□□□□□ -2.2
LSM5P40089 YPL261CYPL261C 309 nt1.33□□□□□ -2.2
LSM5P40089 LCD1YDR499W 2244 nt1.33□□□□□ -2.2
LSM5P40089 RAD9YDR217C 3930 nt1.33□□□□□ -2.2
LSM5P40089 MAD1YGL086W 2250 nt1.33□□□□□ -2.2
LSM5P40089 NUP145YGL092W 3954 nt1.33□□□□□ -2.2
LSM5P40089 CLU1YMR012W 3834 nt1.33□□□□□ -2.2
LSM5P40089 NUP188YML103C 4968 nt1.32□□□□□ -2.2
LSM5P40089 YOR199WYOR199W 330 nt1.32□□□□□ -2.2
LSM5P40089 FIG2YCR089W 4830 nt1.32□□□□□ -2.2
LSM5P40089 FIG4YNL325C 2640 nt1.31□□□□□ -2.2
LSM5P40089 snR72snR72 98 nt1.31□□□□□ -2.2
LSM5P40089 YHR138CYHR138C 345 nt1.31□□□□□ -2.2
LSM5P40089 YCS4YLR272C 3531 nt1.31□□□□□ -2.2
LSM5P40089 PAC1YOR269W 1485 nt1.31□□□□□ -2.2
LSM5P40089 FYV8YGR196C 2454 nt1.3□□□□□ -2.2
LSM5P40089 YJR003CYJR003C 1560 nt1.3□□□□□ -2.2
LSM5P40089 YJL135WYJL135W 318 nt1.3□□□□□ -2.2
LSM5P40089 YAL068W-AYAL068W-A 255 nt1.3□□□□□ -2.2
LSM5P40089 YBR012CYBR012C 420 nt1.3□□□□□ -2.2
LSM5P40089 YDR157WYDR157W 402 nt1.29□□□□□ -2.2
LSM5P40089 YML007C-AYML007C-A 111 nt1.29□□□□□ -2.2
LSM5P40089 IRC23YOR044W 474 nt1.29□□□□□ -2.2
LSM5P40089 YOR121CYOR121C 306 nt1.29□□□□□ -2.2
LSM5P40089 COG4YPR105C 2586 nt1.28□□□□□ -2.2
LSM5P40089 YIL020C-AYIL020C-A 339 nt1.28□□□□□ -2.2
LSM5P40089 RPL38YLR325C 237 nt1.28□□□□□ -2.2
LSM5P40089 YOR072W-AYOR072W-A 249 nt1.28□□□□□ -2.2
LSM5P40089 HKR1YDR420W 5409 nt1.28□□□□□ -2.2
LSM5P40089 POL5YEL055C 3069 nt1.28□□□□□ -2.2
LSM5P40089 APL3YBL037W 3078 nt1.27□□□□□ -2.21
LSM5P40089 RIM20YOR275C 1986 nt1.27□□□□□ -2.21
LSM5P40089 ATG31YDR022C 591 nt1.27□□□□□ -2.21
LSM5P40089 YER137W-AYER137W-A 306 nt1.27□□□□□ -2.21
LSM5P40089 CUL3YGR003W 2235 nt1.27□□□□□ -2.21
LSM5P40089 SPC98YNL126W 2541 nt1.26□□□□□ -2.21
LSM5P40089 GPG1YGL121C 381 nt1.26□□□□□ -2.21
LSM5P40089 YIR044CYIR044C 186 nt1.26□□□□□ -2.21
LSM5P40089 YBR200W-AYBR200W-A 165 nt1.26□□□□□ -2.21
LSM5P40089 PKH2YOL100W 3246 nt1.26□□□□□ -2.21
LSM5P40089 YPR002C-AYPR002C-A 198 nt1.25□□□□□ -2.21
LSM5P40089 YBR221W-AYBR221W-A 105 nt1.25□□□□□ -2.21
LSM5P40089 ALY2YJL084C 3141 nt1.25□□□□□ -2.21
LSM5P40089 RAD34YDR314C 2079 nt1.25□□□□□ -2.21
LSM5P40089 PDE2YOR360C 1581 nt1.25□□□□□ -2.21
LSM5P40089 YGR130CYGR130C 2451 nt1.24□□□□□ -2.21
LSM5P40089 PCC1YKR095W-A 267 nt1.24□□□□□ -2.21
LSM5P40089 STO1YMR125W 2586 nt1.24□□□□□ -2.21
LSM5P40089 MSH3YCR092C 3057 nt1.24□□□□□ -2.21
LSM5P40089 SET3YKR029C 2256 nt1.23□□□□□ -2.21
LSM5P40089 CDC36YDL165W 576 nt1.23□□□□□ -2.21
LSM5P40089 YDR426CYDR426C 378 nt1.23□□□□□ -2.21
LSM5P40089 RPS20YHL015W 366 nt1.23□□□□□ -2.21
LSM5P40089 YOR293C-AYOR293C-A 150 nt1.23□□□□□ -2.21
LSM5P40089 PBY1YBR094W 2262 nt1.22□□□□□ -2.21
LSM5P40089 YAL063C-AYAL063C-A 291 nt1.22□□□□□ -2.21
LSM5P40089 AHC1YOR023C 1701 nt1.21□□□□□ -2.22
LSM5P40089 TTI1YKL033W 3117 nt1.21□□□□□ -2.22
LSM5P40089 YDL206WYDL206W 2289 nt1.21□□□□□ -2.22
LSM5P40089 YFL019CYFL019C 354 nt1.21□□□□□ -2.22
LSM5P40089 RPL33BYOR234C 324 nt1.21□□□□□ -2.22
LSM5P40089 EAF1YDR359C 2949 nt1.21□□□□□ -2.22
LSM5P40089 SMC1YFL008W 3678 nt1.21□□□□□ -2.22
LSM5P40089 YAR053WYAR053W 297 nt1.2□□□□□ -2.22
LSM5P40089 PTP2YOR208W 2253 nt1.19□□□□□ -2.22
LSM5P40089 MAM33YIL070C 801 nt1.19□□□□□ -2.22
LSM5P40089 IFH1YLR223C 3258 nt1.19□□□□□ -2.22
LSM5P40089 WAR1YML076C 2835 nt1.18□□□□□ -2.22
LSM5P40089 YNL284C-BYNL284C-B 5268 nt1.18□□□□□ -2.22
LSM5P40089 BIL1YOR304C-A 231 nt1.18□□□□□ -2.22
LSM5P40089 STB6YKL072W 2301 nt1.18□□□□□ -2.22
LSM5P40089 TRM732YMR259C 4263 nt1.17□□□□□ -2.22
Retrieved 100 of 7,029 protein–RNA pairs in 36.7 ms