Protein–RNA interactions for Protein: P25339

PUF4, Pumilio homology domain family member 4, yeastyeast

Known RBP RIP-Chip data

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
PUF4P25339 tW(CCA)KtW(CCA)K 72 nt2.63□□□□□ -1.99
PUF4P25339 tW(CCA)MtW(CCA)M 72 nt2.63□□□□□ -1.99
PUF4P25339 tW(CCA)PtW(CCA)P 72 nt2.63□□□□□ -1.99
PUF4P25339 YOR218CYOR218C 420 nt2.63□□□□□ -1.99
PUF4P25339 SWR1YDR334W 4545 nt2.63□□□□□ -1.99
PUF4P25339 VPS8YAL002W 3825 nt2.63□□□□□ -1.99
PUF4P25339 LYS14YDR034C 2373 nt2.63□□□□□ -1.99
PUF4P25339 SIR4YDR227W 4077 nt2.63□□□□□ -1.99
PUF4P25339 VMR1YHL035C 4779 nt2.62□□□□□ -1.99
PUF4P25339 FKS3YMR306W 5358 nt2.62□□□□□ -1.99
PUF4P25339 YHR073W-AYHR073W-A 177 nt2.62□□□□□ -1.99
PUF4P25339 YOR394C-AYOR394C-A 168 nt2.62□□□□□ -1.99
PUF4P25339 CYR1YJL005W 6081 nt2.62□□□□□ -1.99
PUF4P25339 DCP2YNL118C 2913 nt2.62□□□□□ -1.99
PUF4P25339 NEW1YPL226W 3591 nt2.61□□□□□ -1.99
PUF4P25339 YEF3YLR249W 3135 nt2.61□□□□□ -1.99
PUF4P25339 YDR544CYDR544C 429 nt2.61□□□□□ -1.99
PUF4P25339 YHR071C-AYHR071C-A 321 nt2.61□□□□□ -1.99
PUF4P25339 PAU8YAL068C 363 nt2.61□□□□□ -1.99
PUF4P25339 PAU18YLL064C 363 nt2.61□□□□□ -1.99
PUF4P25339 PAU6YNR076W 363 nt2.61□□□□□ -1.99
PUF4P25339 PAU20YOL161C 363 nt2.61□□□□□ -1.99
PUF4P25339 PSD2YGR170W 3417 nt2.61□□□□□ -1.99
PUF4P25339 YFR016CYFR016C 3702 nt2.6□□□□□ -1.99
PUF4P25339 PHO91YNR013C 2685 nt2.6□□□□□ -1.99
PUF4P25339 YDR003W-AYDR003W-A 123 nt2.6□□□□□ -1.99
PUF4P25339 MET18YIL128W 3099 nt2.6□□□□□ -1.99
PUF4P25339 YKL165C-AYKL165C-A 234 nt2.59□□□□□ -1.99
PUF4P25339 SPO21YOL091W 1830 nt2.58□□□□□ -2
PUF4P25339 MNE1YOR350C 1992 nt2.58□□□□□ -2
PUF4P25339 COY1YKL179C 2040 nt2.58□□□□□ -2
PUF4P25339 YDR182W-AYDR182W-A 204 nt2.58□□□□□ -2
PUF4P25339 YIL156W-BYIL156W-B 222 nt2.58□□□□□ -2
PUF4P25339 YBL012CYBL012C 402 nt2.58□□□□□ -2
PUF4P25339 YBR174CYBR174C 315 nt2.58□□□□□ -2
PUF4P25339 MCM10YIL150C 1716 nt2.58□□□□□ -2
PUF4P25339 NUP170YBL079W 4509 nt2.57□□□□□ -2 RIP-Chip
PUF4P25339 YIR044CYIR044C 186 nt2.57□□□□□ -2
PUF4P25339 YJL120WYJL120W 324 nt2.57□□□□□ -2
PUF4P25339 SRP14YDL092W 441 nt2.56□□□□□ -2
PUF4P25339 TFB5YDR079C-A 219 nt2.56□□□□□ -2
PUF4P25339 YCL001W-BYCL001W-B 255 nt2.56□□□□□ -2
PUF4P25339 NUM1YDR150W 8247 nt2.55□□□□□ -2
PUF4P25339 PUT3YKL015W 2940 nt2.55□□□□□ -2
PUF4P25339 YLR154W-AYLR154W-A 186 nt2.55□□□□□ -2
PUF4P25339 CDC60YPL160W 3273 nt2.55□□□□□ -2
PUF4P25339 PET309YLR067C 2898 nt2.55□□□□□ -2
PUF4P25339 ZRG17YNR039C 1818 nt2.54□□□□□ -2
PUF4P25339 YMR326CYMR326C 309 nt2.54□□□□□ -2
PUF4P25339 YCL046WYCL046W 324 nt2.54□□□□□ -2
PUF4P25339 KTI11YBL071W-A 249 nt2.53□□□□□ -2
PUF4P25339 MSB1YOR188W 3414 nt2.53□□□□□ -2
PUF4P25339 MSC6YOR354C 2079 nt2.53□□□□□ -2.01
PUF4P25339 BRP1YGL007W 378 nt2.52□□□□□ -2.01
PUF4P25339 RPS25BYLR333C 327 nt2.52□□□□□ -2.01
PUF4P25339 YOR108C-AYOR108C-A 210 nt2.52□□□□□ -2.01
PUF4P25339 MLH1YMR167W 2310 nt2.52□□□□□ -2.01
PUF4P25339 ZIP1YDR285W 2628 nt2.52□□□□□ -2.01
PUF4P25339 TRL1YJL087C 2484 nt2.51□□□□□ -2.01 RIP-Chip
PUF4P25339 SVL3YPL032C 2478 nt2.51□□□□□ -2.01
PUF4P25339 YOR072W-BYOR072W-B 162 nt2.51□□□□□ -2.01
PUF4P25339 MAK10YEL053C 2202 nt2.5□□□□□ -2.01
PUF4P25339 PIG1YLR273C 1947 nt2.5□□□□□ -2.01
PUF4P25339 BNR1YIL159W 4128 nt2.49□□□□□ -2.01
PUF4P25339 NAM7YMR080C 2916 nt2.49□□□□□ -2.01 RIP-Chip
PUF4P25339 HAL9YOL089C 3093 nt2.49□□□□□ -2.01
PUF4P25339 SAS3YBL052C 2496 nt2.49□□□□□ -2.01
PUF4P25339 ELG1YOR144C 2376 nt2.49□□□□□ -2.01
PUF4P25339 INO80YGL150C 4470 nt2.48□□□□□ -2.01
PUF4P25339 RLM1YPL089C 2031 nt2.48□□□□□ -2.01
PUF4P25339 ENV11YGR071C 2583 nt2.48□□□□□ -2.01
PUF4P25339 HSH155YMR288W 2916 nt2.48□□□□□ -2.01
PUF4P25339 PAU3YCR104W 375 nt2.48□□□□□ -2.01
PUF4P25339 YDL196WYDL196W 330 nt2.48□□□□□ -2.01
PUF4P25339 YHR217CYHR217C 462 nt2.48□□□□□ -2.01
PUF4P25339 RAD34YDR314C 2079 nt2.47□□□□□ -2.01
PUF4P25339 ATP7YKL016C 525 nt2.47□□□□□ -2.01
PUF4P25339 RPS17AYML024W 411 nt2.47□□□□□ -2.01
PUF4P25339 YMR242W-AYMR242W-A 90 nt2.47□□□□□ -2.01
PUF4P25339 CAT2YML042W 2013 nt2.47□□□□□ -2.01
PUF4P25339 NOP14YDL148C 2433 nt2.47□□□□□ -2.01
PUF4P25339 TOF1YNL273W 3717 nt2.46□□□□□ -2.02
PUF4P25339 ZIP2YGL249W 2115 nt2.46□□□□□ -2.02
PUF4P25339 YJL022WYJL022W 309 nt2.46□□□□□ -2.02
PUF4P25339 YLL019W-AYLL019W-A 93 nt2.46□□□□□ -2.02
PUF4P25339 YDR341CYDR341C 1824 nt2.46□□□□□ -2.02
PUF4P25339 SSD1YDR293C 3753 nt2.46□□□□□ -2.02
PUF4P25339 NOC3YLR002C 1992 nt2.45□□□□□ -2.02
PUF4P25339 YER053C-AYER053C-A 114 nt2.45□□□□□ -2.02
PUF4P25339 RTT101YJL047C 2529 nt2.45□□□□□ -2.02
PUF4P25339 APL5YPL195W 2799 nt2.45□□□□□ -2.02
PUF4P25339 HMI1YOL095C 2121 nt2.44□□□□□ -2.02
PUF4P25339 YNL103W-AYNL103W-A 90 nt2.44□□□□□ -2.02
PUF4P25339 YOR102WYOR102W 351 nt2.44□□□□□ -2.02 RIP-Chip
PUF4P25339 YOR314W-AYOR314W-A 111 nt2.44□□□□□ -2.02
PUF4P25339 IRE1YHR079C 3348 nt2.43□□□□□ -2.02
PUF4P25339 VPS13YLL040C 9435 nt2.43□□□□□ -2.02
PUF4P25339 RPL31AYDL075W 342 nt2.43□□□□□ -2.02
PUF4P25339 YBR221W-AYBR221W-A 105 nt2.43□□□□□ -2.02
PUF4P25339 NCA2YPR155C 1851 nt2.43□□□□□ -2.02
Retrieved 100 of 7,029 protein–RNA pairs in 8.9 ms