Protein–RNA interactions for Protein: Q8TE82

SH3TC1, SH3 domain and tetratricopeptide repeat-containing protein 1, humanhuman

Predictions only

Length 1,336 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC1Q8TE82 AL121829.2-201ENST00000620908 328 ntBASIC25.27■■□□□ 1.64
SH3TC1Q8TE82 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
SH3TC1Q8TE82 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC25.27■■□□□ 1.64
SH3TC1Q8TE82 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC25.26■■□□□ 1.64
SH3TC1Q8TE82 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC25.26■■□□□ 1.64
SH3TC1Q8TE82 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
SH3TC1Q8TE82 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC25.26■■□□□ 1.63
SH3TC1Q8TE82 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC25.26■■□□□ 1.63
SH3TC1Q8TE82 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC25.26■■□□□ 1.63
SH3TC1Q8TE82 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
SH3TC1Q8TE82 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC25.26■■□□□ 1.63
SH3TC1Q8TE82 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC25.26■■□□□ 1.63
SH3TC1Q8TE82 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
SH3TC1Q8TE82 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
SH3TC1Q8TE82 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC25.26■■□□□ 1.63
SH3TC1Q8TE82 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC25.26■■□□□ 1.63
SH3TC1Q8TE82 AC113410.3-201ENST00000623366 203 ntBASIC25.26■■□□□ 1.63
SH3TC1Q8TE82 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
SH3TC1Q8TE82 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC25.26■■□□□ 1.63
SH3TC1Q8TE82 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
SH3TC1Q8TE82 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC25.25■■□□□ 1.63
SH3TC1Q8TE82 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC25.25■■□□□ 1.63
SH3TC1Q8TE82 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
SH3TC1Q8TE82 KRT17P2-201ENST00000300992 1314 ntBASIC25.25■■□□□ 1.63
SH3TC1Q8TE82 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC25.25■■□□□ 1.63
SH3TC1Q8TE82 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC25.25■■□□□ 1.63
SH3TC1Q8TE82 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC25.25■■□□□ 1.63
SH3TC1Q8TE82 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC25.25■■□□□ 1.63
SH3TC1Q8TE82 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC25.25■■□□□ 1.63
SH3TC1Q8TE82 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC25.25■■□□□ 1.63
SH3TC1Q8TE82 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
SH3TC1Q8TE82 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC25.25■■□□□ 1.63
SH3TC1Q8TE82 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
SH3TC1Q8TE82 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC25.25■■□□□ 1.63
SH3TC1Q8TE82 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
SH3TC1Q8TE82 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
SH3TC1Q8TE82 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC25.24■■□□□ 1.63
SH3TC1Q8TE82 AC124283.5-201ENST00000624661 1809 ntBASIC25.24■■□□□ 1.63
SH3TC1Q8TE82 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
SH3TC1Q8TE82 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC25.24■■□□□ 1.63
SH3TC1Q8TE82 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
SH3TC1Q8TE82 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC25.24■■□□□ 1.63
SH3TC1Q8TE82 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC25.24■■□□□ 1.63
SH3TC1Q8TE82 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC25.24■■□□□ 1.63
SH3TC1Q8TE82 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
SH3TC1Q8TE82 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
SH3TC1Q8TE82 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC25.24■■□□□ 1.63
SH3TC1Q8TE82 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC25.24■■□□□ 1.63
SH3TC1Q8TE82 Six3os1_6.1-201ENST00000620790 196 ntBASIC25.24■■□□□ 1.63
SH3TC1Q8TE82 REXO1L12P-201ENST00000622156 912 ntBASIC25.24■■□□□ 1.63
SH3TC1Q8TE82 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC25.24■■□□□ 1.63
SH3TC1Q8TE82 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
SH3TC1Q8TE82 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
SH3TC1Q8TE82 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC25.24■■□□□ 1.63
SH3TC1Q8TE82 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
SH3TC1Q8TE82 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
SH3TC1Q8TE82 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
SH3TC1Q8TE82 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC25.23■■□□□ 1.63
SH3TC1Q8TE82 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
SH3TC1Q8TE82 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
SH3TC1Q8TE82 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
SH3TC1Q8TE82 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC25.23■■□□□ 1.63
SH3TC1Q8TE82 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC25.23■■□□□ 1.63
SH3TC1Q8TE82 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
SH3TC1Q8TE82 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC25.23■■□□□ 1.63
SH3TC1Q8TE82 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC25.23■■□□□ 1.63
SH3TC1Q8TE82 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC25.23■■□□□ 1.63
SH3TC1Q8TE82 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
SH3TC1Q8TE82 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC25.23■■□□□ 1.63
SH3TC1Q8TE82 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
SH3TC1Q8TE82 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC25.22■■□□□ 1.63
SH3TC1Q8TE82 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
SH3TC1Q8TE82 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
SH3TC1Q8TE82 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
SH3TC1Q8TE82 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
SH3TC1Q8TE82 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC25.22■■□□□ 1.63
SH3TC1Q8TE82 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
SH3TC1Q8TE82 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
SH3TC1Q8TE82 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC25.22■■□□□ 1.63
SH3TC1Q8TE82 ECEL1P3-201ENST00000427961 737 ntBASIC25.22■■□□□ 1.63
SH3TC1Q8TE82 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC25.22■■□□□ 1.63
SH3TC1Q8TE82 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC25.22■■□□□ 1.63
SH3TC1Q8TE82 DHDH-203ENST00000522614 776 ntTSL 5 BASIC25.22■■□□□ 1.63
SH3TC1Q8TE82 BX088651.1-201ENST00000540551 451 ntBASIC25.22■■□□□ 1.63
SH3TC1Q8TE82 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC25.22■■□□□ 1.63
SH3TC1Q8TE82 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
SH3TC1Q8TE82 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
SH3TC1Q8TE82 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
SH3TC1Q8TE82 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
SH3TC1Q8TE82 FEM1AP4-201ENST00000443167 1987 ntBASIC25.21■■□□□ 1.63
SH3TC1Q8TE82 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC25.21■■□□□ 1.63
SH3TC1Q8TE82 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC25.21■■□□□ 1.63
SH3TC1Q8TE82 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC25.21■■□□□ 1.63
SH3TC1Q8TE82 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC25.21■■□□□ 1.63
SH3TC1Q8TE82 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
SH3TC1Q8TE82 MAX-217ENST00000557277 728 ntTSL 3 BASIC25.21■■□□□ 1.63
SH3TC1Q8TE82 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC25.21■■□□□ 1.63
SH3TC1Q8TE82 MIR4785-201ENST00000585005 73 ntBASIC25.21■■□□□ 1.63
SH3TC1Q8TE82 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC25.21■■□□□ 1.63
SH3TC1Q8TE82 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
Retrieved 100 of 98,524 protein–RNA pairs in 129.2 ms