Protein–RNA interactions for Protein: Q08387

DNL4, DNA ligase 4, yeastyeast

Predicted RBP Predictions only

Length 944 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
DNL4Q08387 PFD1YJL179W 330 nt1.6□□□□□ -2.15
DNL4Q08387 YKL083WYKL083W 615 nt1.6□□□□□ -2.15
DNL4Q08387 YAR053WYAR053W 297 nt1.6□□□□□ -2.15
DNL4Q08387 TBS1YBR150C 3285 nt1.6□□□□□ -2.15
DNL4Q08387 TFC8YPL007C 1767 nt1.59□□□□□ -2.15
DNL4Q08387 SMY1YKL079W 1971 nt1.59□□□□□ -2.15
DNL4Q08387 TIM13YGR181W 318 nt1.59□□□□□ -2.15
DNL4Q08387 tW(UCA)QtW(UCA)Q 74 nt1.59□□□□□ -2.15
DNL4Q08387 YJL020W-AYJL020W-A 258 nt1.59□□□□□ -2.15
DNL4Q08387 YAL063C-AYAL063C-A 291 nt1.59□□□□□ -2.15
DNL4Q08387 YML003WYML003W 873 nt1.59□□□□□ -2.15
DNL4Q08387 RPL32YBL092W 393 nt1.59□□□□□ -2.15
DNL4Q08387 IRC23YOR044W 474 nt1.59□□□□□ -2.15
DNL4Q08387 PIP2YOR363C 2991 nt1.59□□□□□ -2.15
DNL4Q08387 YPL225WYPL225W 441 nt1.59□□□□□ -2.15
DNL4Q08387 MDM20YOL076W 2391 nt1.59□□□□□ -2.16
DNL4Q08387 SEF1YBL066C 3447 nt1.59□□□□□ -2.16
DNL4Q08387 FYV8YGR196C 2454 nt1.58□□□□□ -2.16
DNL4Q08387 YDL152WYDL152W 366 nt1.58□□□□□ -2.16
DNL4Q08387 RPL42BYHR141C 321 nt1.58□□□□□ -2.16
DNL4Q08387 RPL42AYNL162W 321 nt1.58□□□□□ -2.16
DNL4Q08387 HIR3YJR140C 4947 nt1.58□□□□□ -2.16
DNL4Q08387 TOF2YKR010C 2316 nt1.57□□□□□ -2.16
DNL4Q08387 PET127YOR017W 2403 nt1.57□□□□□ -2.16
DNL4Q08387 YDL240C-AYDL240C-A 138 nt1.57□□□□□ -2.16
DNL4Q08387 CGI121YML036W 546 nt1.57□□□□□ -2.16
DNL4Q08387 RPL31AYDL075W 342 nt1.56□□□□□ -2.16
DNL4Q08387 YER088C-AYER088C-A 324 nt1.56□□□□□ -2.16
DNL4Q08387 YGR174W-AYGR174W-A 87 nt1.56□□□□□ -2.16
DNL4Q08387 MRPL31YKL138C 396 nt1.56□□□□□ -2.16
DNL4Q08387 YBL073WYBL073W 312 nt1.56□□□□□ -2.16
DNL4Q08387 BIL1YOR304C-A 231 nt1.56□□□□□ -2.16
DNL4Q08387 AIM9YER080W 1884 nt1.56□□□□□ -2.16
DNL4Q08387 SSK2YNR031C 4740 nt1.55□□□□□ -2.16
DNL4Q08387 YJR011CYJR011C 786 nt1.55□□□□□ -2.16
DNL4Q08387 RPS27AYKL156W 249 nt1.55□□□□□ -2.16
DNL4Q08387 YAF9YNL107W 681 nt1.55□□□□□ -2.16
DNL4Q08387 YPL038W-AYPL038W-A 192 nt1.55□□□□□ -2.16
DNL4Q08387 YGR130CYGR130C 2451 nt1.55□□□□□ -2.16
DNL4Q08387 IRR1YIL026C 3453 nt1.54□□□□□ -2.16
DNL4Q08387 MSH6YDR097C 3729 nt1.54□□□□□ -2.16
DNL4Q08387 TRX1YLR043C 312 nt1.54□□□□□ -2.16
DNL4Q08387 TIM18YOR297C 579 nt1.54□□□□□ -2.16
DNL4Q08387 YPL229WYPL229W 621 nt1.54□□□□□ -2.16
DNL4Q08387 NOP53YPL146C 1368 nt1.54□□□□□ -2.16
DNL4Q08387 YGR250CYGR250C 2346 nt1.54□□□□□ -2.16
DNL4Q08387 STF2YGR008C 255 nt1.53□□□□□ -2.16
DNL4Q08387 YHL041WYHL041W 450 nt1.53□□□□□ -2.16
DNL4Q08387 RPL40BYKR094C 387 nt1.53□□□□□ -2.16
DNL4Q08387 YMR230W-AYMR230W-A 189 nt1.53□□□□□ -2.16
DNL4Q08387 PAC1YOR269W 1485 nt1.53□□□□□ -2.16
DNL4Q08387 YBP1YBR216C 2025 nt1.53□□□□□ -2.16
DNL4Q08387 IRE1YHR079C 3348 nt1.53□□□□□ -2.17
DNL4Q08387 MSC6YOR354C 2079 nt1.52□□□□□ -2.17
DNL4Q08387 YNL114CYNL114C 372 nt1.52□□□□□ -2.17
DNL4Q08387 YOR019WYOR019W 2193 nt1.52□□□□□ -2.17
DNL4Q08387 tQ(UUG)E2tQ(UUG)E2 72 nt1.51□□□□□ -2.17
DNL4Q08387 MCM22YJR135C 720 nt1.51□□□□□ -2.17
DNL4Q08387 YKL136WYKL136W 399 nt1.51□□□□□ -2.17
DNL4Q08387 YKL183C-AYKL183C-A 213 nt1.51□□□□□ -2.17
DNL4Q08387 HUG1YML058W-A 207 nt1.51□□□□□ -2.17
DNL4Q08387 YOR072W-AYOR072W-A 249 nt1.51□□□□□ -2.17
DNL4Q08387 CTR9YOL145C 3234 nt1.51□□□□□ -2.17
DNL4Q08387 OSH6YKR003W 1347 nt1.5□□□□□ -2.17
DNL4Q08387 YDR008CYDR008C 351 nt1.5□□□□□ -2.17
DNL4Q08387 SPO24YPR036W-A 204 nt1.5□□□□□ -2.17
DNL4Q08387 SGO1YOR073W 1773 nt1.49□□□□□ -2.17
DNL4Q08387 SWI5YDR146C 2130 nt1.49□□□□□ -2.17
DNL4Q08387 KCS1YDR017C 3153 nt1.49□□□□□ -2.17
DNL4Q08387 SKI3YPR189W 4299 nt1.49□□□□□ -2.17
DNL4Q08387 NHP2YDL208W 471 nt1.49□□□□□ -2.17
DNL4Q08387 CSN9YDR179C 489 nt1.49□□□□□ -2.17
DNL4Q08387 ABM1YJR108W 372 nt1.49□□□□□ -2.17
DNL4Q08387 YCL046WYCL046W 324 nt1.49□□□□□ -2.17
DNL4Q08387 MON2YNL297C 4911 nt1.49□□□□□ -2.17
DNL4Q08387 PXA2YKL188C 2562 nt1.48□□□□□ -2.17
DNL4Q08387 PAU18YLL064C 363 nt1.48□□□□□ -2.17
DNL4Q08387 YMR141W-AYMR141W-A 225 nt1.48□□□□□ -2.17
DNL4Q08387 PAU6YNR076W 363 nt1.48□□□□□ -2.17
DNL4Q08387 HKR1YDR420W 5409 nt1.48□□□□□ -2.17
DNL4Q08387 LAA1YJL207C 6045 nt1.47□□□□□ -2.17
DNL4Q08387 YDR102CYDR102C 333 nt1.47□□□□□ -2.17
DNL4Q08387 CYC7YEL039C 342 nt1.47□□□□□ -2.17
DNL4Q08387 YKL118WYKL118W 312 nt1.47□□□□□ -2.17
DNL4Q08387 HMI1YOL095C 2121 nt1.47□□□□□ -2.17
DNL4Q08387 HHT1YBR010W 411 nt1.47□□□□□ -2.17
DNL4Q08387 CCH1YGR217W 6120 nt1.47□□□□□ -2.17
DNL4Q08387 RLM1YPL089C 2031 nt1.47□□□□□ -2.17
DNL4Q08387 YDR413CYDR413C 576 nt1.46□□□□□ -2.18
DNL4Q08387 tH(GUG)E1tH(GUG)E1 72 nt1.46□□□□□ -2.18
DNL4Q08387 tH(GUG)E2tH(GUG)E2 72 nt1.46□□□□□ -2.18
DNL4Q08387 tH(GUG)G1tH(GUG)G1 72 nt1.46□□□□□ -2.18
DNL4Q08387 tH(GUG)G2tH(GUG)G2 72 nt1.46□□□□□ -2.18
DNL4Q08387 tH(GUG)HtH(GUG)H 72 nt1.46□□□□□ -2.18
DNL4Q08387 tH(GUG)KtH(GUG)K 72 nt1.46□□□□□ -2.18
DNL4Q08387 tH(GUG)MtH(GUG)M 72 nt1.46□□□□□ -2.18
DNL4Q08387 YIL059CYIL059C 366 nt1.46□□□□□ -2.18
DNL4Q08387 YLR146W-AYLR146W-A 189 nt1.46□□□□□ -2.18
DNL4Q08387 YNL146WYNL146W 303 nt1.46□□□□□ -2.18
DNL4Q08387 snR36snR36 182 nt1.46□□□□□ -2.18
Retrieved 100 of 7,029 protein–RNA pairs in 39.6 ms