Protein–RNA interactions for Protein: P53179

RIM8, pH-response regulator protein palF/RIM8, yeastyeast

Predictions only

Length 542 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RIM8P53179 DSE4YNR067C 3354 nt2.62□□□□□ -1.99
RIM8P53179 NIP100YPL174C 2607 nt2.62□□□□□ -1.99
RIM8P53179 UBP11YKR098C 2154 nt2.61□□□□□ -1.99
RIM8P53179 YDL196WYDL196W 330 nt2.61□□□□□ -1.99
RIM8P53179 RPS12YOR369C 432 nt2.61□□□□□ -1.99
RIM8P53179 YBR174CYBR174C 315 nt2.61□□□□□ -1.99
RIM8P53179 MAK21YDR060W 3078 nt2.61□□□□□ -1.99
RIM8P53179 SLN1YIL147C 3663 nt2.6□□□□□ -1.99
RIM8P53179 YIL156W-BYIL156W-B 222 nt2.6□□□□□ -1.99
RIM8P53179 YLL019W-AYLL019W-A 93 nt2.6□□□□□ -1.99
RIM8P53179 NET1YJL076W 3570 nt2.6□□□□□ -1.99
RIM8P53179 RIF1YBR275C 5751 nt2.6□□□□□ -1.99
RIM8P53179 PAA1YDR071C 576 nt2.59□□□□□ -1.99
RIM8P53179 tW(CCA)G1tW(CCA)G1 72 nt2.59□□□□□ -1.99
RIM8P53179 tW(CCA)G2tW(CCA)G2 72 nt2.59□□□□□ -1.99
RIM8P53179 tW(CCA)JtW(CCA)J 72 nt2.59□□□□□ -1.99
RIM8P53179 tW(CCA)KtW(CCA)K 72 nt2.59□□□□□ -1.99
RIM8P53179 tW(CCA)MtW(CCA)M 72 nt2.59□□□□□ -1.99
RIM8P53179 tW(CCA)PtW(CCA)P 72 nt2.59□□□□□ -1.99
RIM8P53179 YIL082W-AYIL082W-A 4497 nt2.59□□□□□ -2
RIM8P53179 STE11YLR362W 2154 nt2.59□□□□□ -2
RIM8P53179 PEP3YLR148W 2757 nt2.58□□□□□ -2
RIM8P53179 YHR071C-AYHR071C-A 321 nt2.58□□□□□ -2
RIM8P53179 NOP10YHR072W-A 177 nt2.58□□□□□ -2
RIM8P53179 YNL114CYNL114C 372 nt2.58□□□□□ -2
RIM8P53179 YBR221W-AYBR221W-A 105 nt2.58□□□□□ -2
RIM8P53179 TOR1YJR066W 7413 nt2.58□□□□□ -2
RIM8P53179 CYR1YJL005W 6081 nt2.58□□□□□ -2
RIM8P53179 TOM1YDR457W 9807 nt2.58□□□□□ -2
RIM8P53179 HAL9YOL089C 3093 nt2.57□□□□□ -2
RIM8P53179 RGR1YLR071C 3249 nt2.57□□□□□ -2
RIM8P53179 APL5YPL195W 2799 nt2.57□□□□□ -2
RIM8P53179 RPH1YER169W 2391 nt2.57□□□□□ -2
RIM8P53179 RPL42BYHR141C 321 nt2.57□□□□□ -2
RIM8P53179 YBL012CYBL012C 402 nt2.57□□□□□ -2
RIM8P53179 RPL42AYNL162W 321 nt2.57□□□□□ -2
RIM8P53179 PRP8YHR165C 7242 nt2.57□□□□□ -2
RIM8P53179 MLH1YMR167W 2310 nt2.56□□□□□ -2
RIM8P53179 RFX1YLR176C 2436 nt2.56□□□□□ -2
RIM8P53179 PSY2YNL201C 2577 nt2.55□□□□□ -2
RIM8P53179 snR76snR76 109 nt2.55□□□□□ -2
RIM8P53179 SRP14YDL092W 441 nt2.55□□□□□ -2
RIM8P53179 RPL20AYMR242C 519 nt2.55□□□□□ -2
RIM8P53179 ZRG17YNR039C 1818 nt2.55□□□□□ -2
RIM8P53179 AHC1YOR023C 1701 nt2.55□□□□□ -2
RIM8P53179 CDC31YOR257W 486 nt2.55□□□□□ -2
RIM8P53179 YPL044CYPL044C 549 nt2.55□□□□□ -2
RIM8P53179 snR43snR43 209 nt2.55□□□□□ -2
RIM8P53179 BNR1YIL159W 4128 nt2.55□□□□□ -2
RIM8P53179 PHO91YNR013C 2685 nt2.55□□□□□ -2
RIM8P53179 HRD3YLR207W 2502 nt2.54□□□□□ -2
RIM8P53179 NCA2YPR155C 1851 nt2.54□□□□□ -2
RIM8P53179 MSB1YOR188W 3414 nt2.54□□□□□ -2
RIM8P53179 PAU3YCR104W 375 nt2.54□□□□□ -2
RIM8P53179 YGL041C-BYGL041C-B 183 nt2.54□□□□□ -2
RIM8P53179 YHR073W-AYHR073W-A 177 nt2.54□□□□□ -2
RIM8P53179 YJL120WYJL120W 324 nt2.54□□□□□ -2
RIM8P53179 SVL3YPL032C 2478 nt2.54□□□□□ -2
RIM8P53179 MSC6YOR354C 2079 nt2.54□□□□□ -2
RIM8P53179 SGS1YMR190C 4344 nt2.54□□□□□ -2
RIM8P53179 SMY1YKL079W 1971 nt2.53□□□□□ -2
RIM8P53179 FIG4YNL325C 2640 nt2.53□□□□□ -2
RIM8P53179 YFR012W-AYFR012W-A 87 nt2.53□□□□□ -2
RIM8P53179 ATP7YKL016C 525 nt2.53□□□□□ -2
RIM8P53179 RPS25BYLR333C 327 nt2.53□□□□□ -2
RIM8P53179 SWI6YLR182W 2412 nt2.53□□□□□ -2
RIM8P53179 KSP1YHR082C 3090 nt2.53□□□□□ -2.01
RIM8P53179 DNL4YOR005C 2835 nt2.52□□□□□ -2.01
RIM8P53179 tL(UAA)QtL(UAA)Q 85 nt2.52□□□□□ -2.01
RIM8P53179 SLH1YGR271W 5904 nt2.52□□□□□ -2.01
RIM8P53179 MNE1YOR350C 1992 nt2.52□□□□□ -2.01
RIM8P53179 YKU80YMR106C 1890 nt2.52□□□□□ -2.01
RIM8P53179 YDR239CYDR239C 2364 nt2.51□□□□□ -2.01
RIM8P53179 YPR089WYPR089W 2667 nt2.51□□□□□ -2.01
RIM8P53179 ESC1YMR219W 4977 nt2.51□□□□□ -2.01
RIM8P53179 STB4YMR019W 2850 nt2.51□□□□□ -2.01
RIM8P53179 YNL211CYNL211C 261 nt2.51□□□□□ -2.01
RIM8P53179 VPS13YLL040C 9435 nt2.51□□□□□ -2.01
RIM8P53179 SNF5YBR289W 2718 nt2.5□□□□□ -2.01
RIM8P53179 VMR1YHL035C 4779 nt2.5□□□□□ -2.01
RIM8P53179 OST4YDL232W 111 nt2.5□□□□□ -2.01
RIM8P53179 YLR282CYLR282C 342 nt2.5□□□□□ -2.01
RIM8P53179 SWI5YDR146C 2130 nt2.5□□□□□ -2.01
RIM8P53179 NOC3YLR002C 1992 nt2.49□□□□□ -2.01
RIM8P53179 NFT1YKR103W 3657 nt2.49□□□□□ -2.01
RIM8P53179 YCR043CYCR043C 384 nt2.49□□□□□ -2.01
RIM8P53179 CMC4YMR194C-B 222 nt2.49□□□□□ -2.01
RIM8P53179 PRP6YBR055C 2700 nt2.49□□□□□ -2.01
RIM8P53179 SWR1YDR334W 4545 nt2.49□□□□□ -2.01
RIM8P53179 DNA2YHR164C 4569 nt2.49□□□□□ -2.01
RIM8P53179 SPO22YIL073C 2928 nt2.48□□□□□ -2.01
RIM8P53179 GIS1YDR096W 2685 nt2.48□□□□□ -2.01
RIM8P53179 SMY2YBR172C 2223 nt2.48□□□□□ -2.01
RIM8P53179 FMP16YDR070C 282 nt2.48□□□□□ -2.01
RIM8P53179 YIL134C-AYIL134C-A 204 nt2.48□□□□□ -2.01
RIM8P53179 KTI11YBL071W-A 249 nt2.48□□□□□ -2.01
RIM8P53179 YBR277CYBR277C 402 nt2.48□□□□□ -2.01
RIM8P53179 AIM44YPL158C 2277 nt2.48□□□□□ -2.01
RIM8P53179 SUL1YBR294W 2580 nt2.48□□□□□ -2.01
RIM8P53179 SLY1YDR189W 2001 nt2.47□□□□□ -2.01
Retrieved 100 of 7,029 protein–RNA pairs in 94.6 ms