Protein–RNA interactions for Protein: P36534

MRPL40, 54S ribosomal protein L40, mitochondrial, yeastyeast

Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
MRPL40P36534 SPT21YMR179W 2277 nt1.14□□□□□ -2.23
MRPL40P36534 CDC39YCR093W 6327 nt1.14□□□□□ -2.23
MRPL40P36534 SRP14YDL092W 441 nt1.14□□□□□ -2.23
MRPL40P36534 YDR114CYDR114C 303 nt1.14□□□□□ -2.23
MRPL40P36534 SPO23YBR250W 1572 nt1.13□□□□□ -2.23
MRPL40P36534 SNU56YDR240C 1479 nt1.13□□□□□ -2.23
MRPL40P36534 APQ13YJL075C 417 nt1.13□□□□□ -2.23
MRPL40P36534 NUP145YGL092W 3954 nt1.13□□□□□ -2.23
MRPL40P36534 EAF1YDR359C 2949 nt1.12□□□□□ -2.23
MRPL40P36534 LYS14YDR034C 2373 nt1.12□□□□□ -2.23
MRPL40P36534 snR84snR84 550 nt1.12□□□□□ -2.23
MRPL40P36534 HIT1YJR055W 495 nt1.12□□□□□ -2.23
MRPL40P36534 YLR146W-AYLR146W-A 189 nt1.12□□□□□ -2.23
MRPL40P36534 YML009C-AYML009C-A 327 nt1.12□□□□□ -2.23
MRPL40P36534 HCH1YNL281W 462 nt1.12□□□□□ -2.23
MRPL40P36534 STB6YKL072W 2301 nt1.12□□□□□ -2.23
MRPL40P36534 UTP20YBL004W 7482 nt1.11□□□□□ -2.23
MRPL40P36534 YMR153C-AYMR153C-A 336 nt1.11□□□□□ -2.23
MRPL40P36534 RPS30BYOR182C 192 nt1.11□□□□□ -2.23
MRPL40P36534 snR14snR14 160 nt1.11□□□□□ -2.23
MRPL40P36534 APL3YBL037W 3078 nt1.11□□□□□ -2.23
MRPL40P36534 SWI6YLR182W 2412 nt1.1□□□□□ -2.23
MRPL40P36534 YDR029WYDR029W 315 nt1.1□□□□□ -2.23
MRPL40P36534 EMT1tM(CAU)D 73 nt1.1□□□□□ -2.23
MRPL40P36534 EMT5tM(CAU)J1 73 nt1.1□□□□□ -2.23
MRPL40P36534 EMT3tM(CAU)J2 73 nt1.1□□□□□ -2.23
MRPL40P36534 EMT4tM(CAU)M 73 nt1.1□□□□□ -2.23
MRPL40P36534 EMT2tM(CAU)O2 73 nt1.1□□□□□ -2.23
MRPL40P36534 YAP3YHL009C 993 nt1.1□□□□□ -2.23
MRPL40P36534 snR13snR13 124 nt1.1□□□□□ -2.23
MRPL40P36534 MPT5YGL178W 2580 nt1.09□□□□□ -2.24
MRPL40P36534 MXR1YER042W 555 nt1.08□□□□□ -2.24
MRPL40P36534 HUR1YGL168W 333 nt1.08□□□□□ -2.24
MRPL40P36534 YGR025WYGR025W 303 nt1.08□□□□□ -2.24
MRPL40P36534 NUT2YPR168W 474 nt1.08□□□□□ -2.24
MRPL40P36534 AIM44YPL158C 2277 nt1.08□□□□□ -2.24
MRPL40P36534 YPR117WYPR117W 7470 nt1.07□□□□□ -2.24
MRPL40P36534 HMLALPHA2YCL067C 633 nt1.07□□□□□ -2.24
MRPL40P36534 MATALPHA2YCR039C 633 nt1.07□□□□□ -2.24
MRPL40P36534 YGR045CYGR045C 363 nt1.07□□□□□ -2.24
MRPL40P36534 YMR175W-AYMR175W-A 195 nt1.07□□□□□ -2.24
MRPL40P36534 YBR012CYBR012C 420 nt1.07□□□□□ -2.24
MRPL40P36534 TSC3YBR058C-A 243 nt1.07□□□□□ -2.24
MRPL40P36534 PXA2YKL188C 2562 nt1.06□□□□□ -2.24
MRPL40P36534 RPL9AYGL147C 576 nt1.06□□□□□ -2.24
MRPL40P36534 BIG1YHR101C 1008 nt1.06□□□□□ -2.24
MRPL40P36534 AI5_ALPHAQ0070 1893 nt1.05□□□□□ -2.24
MRPL40P36534 YER023C-AYER023C-A 213 nt1.05□□□□□ -2.24
MRPL40P36534 YGL239CYGL239C 315 nt1.05□□□□□ -2.24
MRPL40P36534 YMR242W-AYMR242W-A 90 nt1.05□□□□□ -2.24
MRPL40P36534 RCN2YOR220W 798 nt1.05□□□□□ -2.24
MRPL40P36534 SCW11YGL028C 1629 nt1.04□□□□□ -2.24
MRPL40P36534 KAP120YPL125W 3099 nt1.04□□□□□ -2.24
MRPL40P36534 PAM16YJL104W 450 nt1.04□□□□□ -2.24
MRPL40P36534 SDH2YLL041C 801 nt1.04□□□□□ -2.24
MRPL40P36534 RUF22RUF22 515 nt1.04□□□□□ -2.24
MRPL40P36534 SAS3YBL052C 2496 nt1.04□□□□□ -2.24
MRPL40P36534 YER135CYER135C 393 nt1.03□□□□□ -2.24
MRPL40P36534 PAU12YGR294W 363 nt1.03□□□□□ -2.24
MRPL40P36534 INA22YIR024C 651 nt1.03□□□□□ -2.24
MRPL40P36534 RPL32YBL092W 393 nt1.03□□□□□ -2.24
MRPL40P36534 PAU24YBR301W 363 nt1.03□□□□□ -2.24
MRPL40P36534 ENV11YGR071C 2583 nt1.03□□□□□ -2.24
MRPL40P36534 YLL032CYLL032C 2478 nt1.03□□□□□ -2.25
MRPL40P36534 BEM2YER155C 6504 nt1.02□□□□□ -2.25
MRPL40P36534 RFX1YLR176C 2436 nt1.02□□□□□ -2.25
MRPL40P36534 BUD3YCL014W 4911 nt1.01□□□□□ -2.25
MRPL40P36534 ALY2YJL084C 3141 nt1□□□□□ -2.25
MRPL40P36534 YDR182W-AYDR182W-A 204 nt1□□□□□ -2.25
MRPL40P36534 YIL059CYIL059C 366 nt1□□□□□ -2.25
MRPL40P36534 UPS1YLR193C 528 nt1□□□□□ -2.25
MRPL40P36534 YBR200W-AYBR200W-A 165 nt1□□□□□ -2.25
MRPL40P36534 YBR221W-AYBR221W-A 105 nt1□□□□□ -2.25
MRPL40P36534 SMC1YFL008W 3678 nt1□□□□□ -2.25
MRPL40P36534 SET3YKR029C 2256 nt1□□□□□ -2.25
MRPL40P36534 SLY1YDR189W 2001 nt0.99□□□□□ -2.25
MRPL40P36534 NUP157YER105C 4176 nt0.99□□□□□ -2.25
MRPL40P36534 NBL1YHR199C-A 222 nt0.99□□□□□ -2.25
MRPL40P36534 URM1YIL008W 300 nt0.99□□□□□ -2.25
MRPL40P36534 RPL16AYIL133C 600 nt0.99□□□□□ -2.25
MRPL40P36534 PHS1YJL097W 654 nt0.99□□□□□ -2.25
MRPL40P36534 EAF6YJR082C 342 nt0.99□□□□□ -2.25
MRPL40P36534 MRPL31YKL138C 396 nt0.99□□□□□ -2.25
MRPL40P36534 GPI15YNL038W 690 nt0.99□□□□□ -2.25
MRPL40P36534 FIG4YNL325C 2640 nt0.99□□□□□ -2.25
MRPL40P36534 YDL073WYDL073W 2955 nt0.99□□□□□ -2.25
MRPL40P36534 DOP1YDR141C 5097 nt0.98□□□□□ -2.25
MRPL40P36534 IFH1YLR223C 3258 nt0.98□□□□□ -2.25
MRPL40P36534 YDR269CYDR269C 324 nt0.98□□□□□ -2.25
MRPL40P36534 YER076W-AYER076W-A 348 nt0.98□□□□□ -2.25
MRPL40P36534 IRC23YOR044W 474 nt0.98□□□□□ -2.25
MRPL40P36534 YPL182CYPL182C 384 nt0.98□□□□□ -2.25
MRPL40P36534 YCR001WYCR001W 315 nt0.97□□□□□ -2.25
MRPL40P36534 EMC4YGL231C 573 nt0.97□□□□□ -2.25
MRPL40P36534 YHR139C-AYHR139C-A 312 nt0.97□□□□□ -2.25
MRPL40P36534 OST1YJL002C 1431 nt0.97□□□□□ -2.25
MRPL40P36534 tF(GAA)BtF(GAA)B 73 nt0.96□□□□□ -2.26
MRPL40P36534 tF(GAA)FtF(GAA)F 73 nt0.96□□□□□ -2.26
MRPL40P36534 tF(GAA)GtF(GAA)G 73 nt0.96□□□□□ -2.26
MRPL40P36534 tF(GAA)H1tF(GAA)H1 73 nt0.96□□□□□ -2.26
Retrieved 100 of 7,029 protein–RNA pairs in 56.8 ms