Protein–RNA interactions for Protein: P23643

VPS3, Vacuolar protein sorting-associated protein 3, yeastyeast

Predictions only

Length 1,011 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS3P23643 YMR242W-AYMR242W-A 90 nt1.06□□□□□ -2.24
VPS3P23643 RCN2YOR220W 798 nt1.06□□□□□ -2.24
VPS3P23643 CDC39YCR093W 6327 nt1.06□□□□□ -2.24
VPS3P23643 TOF2YKR010C 2316 nt1.05□□□□□ -2.24
VPS3P23643 UBP3YER151C 2739 nt1.05□□□□□ -2.24
VPS3P23643 snR84snR84 550 nt1.05□□□□□ -2.24
VPS3P23643 RTR1YER139C 681 nt1.05□□□□□ -2.24
VPS3P23643 HUR1YGL168W 333 nt1.05□□□□□ -2.24
VPS3P23643 RPS30BYOR182C 192 nt1.05□□□□□ -2.24
VPS3P23643 ZIP1YDR285W 2628 nt1.04□□□□□ -2.24
VPS3P23643 SWI4YER111C 3282 nt1.04□□□□□ -2.24
VPS3P23643 SGO1YOR073W 1773 nt1.04□□□□□ -2.24
VPS3P23643 snR14snR14 160 nt1.04□□□□□ -2.24
VPS3P23643 GDS1YOR355W 1569 nt1.04□□□□□ -2.24
VPS3P23643 NUT1YGL151W 3399 nt1.04□□□□□ -2.24
VPS3P23643 YER135CYER135C 393 nt1.03□□□□□ -2.24
VPS3P23643 APQ13YJL075C 417 nt1.03□□□□□ -2.24
VPS3P23643 HIT1YJR055W 495 nt1.03□□□□□ -2.24
VPS3P23643 RPL9BYNL067W 576 nt1.03□□□□□ -2.24
VPS3P23643 SCC2YDR180W 4482 nt1.03□□□□□ -2.24
VPS3P23643 BEM2YER155C 6504 nt1.03□□□□□ -2.24
VPS3P23643 VPS54YDR027C 2670 nt1.02□□□□□ -2.25
VPS3P23643 DOP1YDR141C 5097 nt1.02□□□□□ -2.25
VPS3P23643 EAF1YDR359C 2949 nt1.02□□□□□ -2.25
VPS3P23643 YAP3YHL009C 993 nt1.02□□□□□ -2.25
VPS3P23643 YLL054CYLL054C 2532 nt1.02□□□□□ -2.25
VPS3P23643 PIG1YLR273C 1947 nt1.02□□□□□ -2.25
VPS3P23643 MKT1YNL085W 2493 nt1.02□□□□□ -2.25
VPS3P23643 SPO23YBR250W 1572 nt1.02□□□□□ -2.25
VPS3P23643 LYS14YDR034C 2373 nt1.01□□□□□ -2.25
VPS3P23643 KAP120YPL125W 3099 nt1.01□□□□□ -2.25
VPS3P23643 YER023C-AYER023C-A 213 nt1.01□□□□□ -2.25
VPS3P23643 YGR025WYGR025W 303 nt1.01□□□□□ -2.25
VPS3P23643 YMR153C-AYMR153C-A 336 nt1.01□□□□□ -2.25
VPS3P23643 STB6YKL072W 2301 nt1□□□□□ -2.25
VPS3P23643 snR13snR13 124 nt1□□□□□ -2.25
VPS3P23643 SPT21YMR179W 2277 nt1□□□□□ -2.25
VPS3P23643 RPL9AYGL147C 576 nt0.99□□□□□ -2.25
VPS3P23643 YHR139C-AYHR139C-A 312 nt0.99□□□□□ -2.25
VPS3P23643 INA22YIR024C 651 nt0.99□□□□□ -2.25
VPS3P23643 YML009C-AYML009C-A 327 nt0.99□□□□□ -2.25
VPS3P23643 RPL32YBL092W 393 nt0.99□□□□□ -2.25
VPS3P23643 APL3YBL037W 3078 nt0.99□□□□□ -2.25
VPS3P23643 NOC3YLR002C 1992 nt0.98□□□□□ -2.25
VPS3P23643 HMLALPHA2YCL067C 633 nt0.98□□□□□ -2.25
VPS3P23643 MATALPHA2YCR039C 633 nt0.98□□□□□ -2.25
VPS3P23643 NUT2YPR168W 474 nt0.98□□□□□ -2.25
VPS3P23643 PXA2YKL188C 2562 nt0.98□□□□□ -2.25
VPS3P23643 YDR114CYDR114C 303 nt0.97□□□□□ -2.25
VPS3P23643 YNR025CYNR025C 360 nt0.97□□□□□ -2.25
VPS3P23643 IFH1YLR223C 3258 nt0.97□□□□□ -2.25
VPS3P23643 SMC1YFL008W 3678 nt0.96□□□□□ -2.26
VPS3P23643 YLR146W-AYLR146W-A 189 nt0.96□□□□□ -2.26
VPS3P23643 GPI15YNL038W 690 nt0.96□□□□□ -2.26
VPS3P23643 ENV11YGR071C 2583 nt0.96□□□□□ -2.26
VPS3P23643 AI5_ALPHAQ0070 1893 nt0.95□□□□□ -2.26
VPS3P23643 MXR1YER042W 555 nt0.95□□□□□ -2.26
VPS3P23643 EMC4YGL231C 573 nt0.95□□□□□ -2.26
VPS3P23643 YGL239CYGL239C 315 nt0.95□□□□□ -2.26
VPS3P23643 STE18YJR086W 333 nt0.95□□□□□ -2.26
VPS3P23643 OST1YJL002C 1431 nt0.95□□□□□ -2.26
VPS3P23643 YDR182W-AYDR182W-A 204 nt0.94□□□□□ -2.26
VPS3P23643 PAU12YGR294W 363 nt0.94□□□□□ -2.26
VPS3P23643 BIG1YHR101C 1008 nt0.94□□□□□ -2.26
VPS3P23643 YMR175W-AYMR175W-A 195 nt0.94□□□□□ -2.26
VPS3P23643 RUF22RUF22 515 nt0.94□□□□□ -2.26
VPS3P23643 TSC3YBR058C-A 243 nt0.94□□□□□ -2.26
VPS3P23643 PAU24YBR301W 363 nt0.94□□□□□ -2.26
VPS3P23643 URM1YIL008W 300 nt0.93□□□□□ -2.26
VPS3P23643 MPT5YGL178W 2580 nt0.93□□□□□ -2.26
VPS3P23643 YLL032CYLL032C 2478 nt0.92□□□□□ -2.26
VPS3P23643 SWI6YLR182W 2412 nt0.92□□□□□ -2.26
VPS3P23643 YCR001WYCR001W 315 nt0.92□□□□□ -2.26
VPS3P23643 YGR045CYGR045C 363 nt0.92□□□□□ -2.26
VPS3P23643 NBL1YHR199C-A 222 nt0.92□□□□□ -2.26
VPS3P23643 EAF6YJR082C 342 nt0.92□□□□□ -2.26
VPS3P23643 YLR269CYLR269C 351 nt0.92□□□□□ -2.26
VPS3P23643 IRC23YOR044W 474 nt0.92□□□□□ -2.26
VPS3P23643 UTP20YBL004W 7482 nt0.91□□□□□ -2.26
VPS3P23643 SAS3YBL052C 2496 nt0.91□□□□□ -2.26
VPS3P23643 SCW11YGL028C 1629 nt0.91□□□□□ -2.26
VPS3P23643 SDH2YLL041C 801 nt0.91□□□□□ -2.26
VPS3P23643 PBI2YNL015W 228 nt0.91□□□□□ -2.26
VPS3P23643 YBR012CYBR012C 420 nt0.91□□□□□ -2.26
VPS3P23643 YBR221W-AYBR221W-A 105 nt0.91□□□□□ -2.26
VPS3P23643 SET3YKR029C 2256 nt0.9□□□□□ -2.26
VPS3P23643 YIL142C-AYIL142C-A 333 nt0.9□□□□□ -2.27
VPS3P23643 PHS1YJL097W 654 nt0.9□□□□□ -2.27
VPS3P23643 ERP4YOR016C 624 nt0.9□□□□□ -2.27
VPS3P23643 RFX1YLR176C 2436 nt0.9□□□□□ -2.27
VPS3P23643 YJR003CYJR003C 1560 nt0.89□□□□□ -2.27
VPS3P23643 YER076W-AYER076W-A 348 nt0.89□□□□□ -2.27
VPS3P23643 YER084W-AYER084W-A 513 nt0.89□□□□□ -2.27
VPS3P23643 UPS1YLR193C 528 nt0.89□□□□□ -2.27
VPS3P23643 tF(GAA)BtF(GAA)B 73 nt0.88□□□□□ -2.27
VPS3P23643 tF(GAA)FtF(GAA)F 73 nt0.88□□□□□ -2.27
VPS3P23643 tF(GAA)GtF(GAA)G 73 nt0.88□□□□□ -2.27
VPS3P23643 tF(GAA)H1tF(GAA)H1 73 nt0.88□□□□□ -2.27
VPS3P23643 tF(GAA)H2tF(GAA)H2 73 nt0.88□□□□□ -2.27
VPS3P23643 tF(GAA)MtF(GAA)M 73 nt0.88□□□□□ -2.27
Retrieved 100 of 7,029 protein–RNA pairs in 48.1 ms