Protein–RNA interactions for Protein: P07703

RPC40, DNA-directed RNA polymerases I and III subunit RPAC1, yeastyeast

Known RBP Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPC40P07703 PIG1YLR273C 1947 nt1.12□□□□□ -2.23
RPC40P07703 YEL050W-AYEL050W-A 192 nt1.11□□□□□ -2.23
RPC40P07703 YGR045CYGR045C 363 nt1.11□□□□□ -2.23
RPC40P07703 YMR153C-AYMR153C-A 336 nt1.11□□□□□ -2.23
RPC40P07703 GPI15YNL038W 690 nt1.11□□□□□ -2.23
RPC40P07703 MKT1YNL085W 2493 nt1.11□□□□□ -2.23
RPC40P07703 SPO23YBR250W 1572 nt1.1□□□□□ -2.23
RPC40P07703 YDR114CYDR114C 303 nt1.1□□□□□ -2.23
RPC40P07703 HIT1YJR055W 495 nt1.1□□□□□ -2.23
RPC40P07703 KAP120YPL125W 3099 nt1.1□□□□□ -2.23
RPC40P07703 LYS14YDR034C 2373 nt1.1□□□□□ -2.23
RPC40P07703 YDL158CYDL158C 309 nt1.09□□□□□ -2.23
RPC40P07703 YER023C-AYER023C-A 213 nt1.09□□□□□ -2.23
RPC40P07703 EMT1tM(CAU)D 73 nt1.09□□□□□ -2.23
RPC40P07703 EMT5tM(CAU)J1 73 nt1.09□□□□□ -2.23
RPC40P07703 EMT3tM(CAU)J2 73 nt1.09□□□□□ -2.23
RPC40P07703 EMT4tM(CAU)M 73 nt1.09□□□□□ -2.23
RPC40P07703 EMT2tM(CAU)O2 73 nt1.09□□□□□ -2.23
RPC40P07703 STE18YJR086W 333 nt1.09□□□□□ -2.23
RPC40P07703 YLR146W-AYLR146W-A 189 nt1.09□□□□□ -2.23
RPC40P07703 YBR012CYBR012C 420 nt1.09□□□□□ -2.23
RPC40P07703 SWI6YLR182W 2412 nt1.09□□□□□ -2.24
RPC40P07703 BEM2YER155C 6504 nt1.08□□□□□ -2.24
RPC40P07703 VAM6YDL077C 3150 nt1.08□□□□□ -2.24
RPC40P07703 YER135CYER135C 393 nt1.08□□□□□ -2.24
RPC40P07703 ANS1YHR126C 480 nt1.08□□□□□ -2.24
RPC40P07703 PBI2YNL015W 228 nt1.08□□□□□ -2.24
RPC40P07703 YGL239CYGL239C 315 nt1.07□□□□□ -2.24
RPC40P07703 CDC39YCR093W 6327 nt1.06□□□□□ -2.24
RPC40P07703 YCR001WYCR001W 315 nt1.06□□□□□ -2.24
RPC40P07703 YHR139C-AYHR139C-A 312 nt1.06□□□□□ -2.24
RPC40P07703 snR14snR14 160 nt1.06□□□□□ -2.24
RPC40P07703 MPT5YGL178W 2580 nt1.06□□□□□ -2.24
RPC40P07703 URM1YIL008W 300 nt1.05□□□□□ -2.24
RPC40P07703 RPL34BYIL052C 366 nt1.05□□□□□ -2.24
RPC40P07703 RPL32YBL092W 393 nt1.05□□□□□ -2.24
RPC40P07703 YBR076C-AYBR076C-A 267 nt1.05□□□□□ -2.24
RPC40P07703 PXA2YKL188C 2562 nt1.05□□□□□ -2.24
RPC40P07703 ALY2YJL084C 3141 nt1.05□□□□□ -2.24
RPC40P07703 NUP157YER105C 4176 nt1.04□□□□□ -2.24
RPC40P07703 RPL16AYIL133C 600 nt1.04□□□□□ -2.24
RPC40P07703 SPO75YLL005C 2607 nt1.03□□□□□ -2.24
RPC40P07703 AI5_ALPHAQ0070 1893 nt1.03□□□□□ -2.24
RPC40P07703 AIM44YPL158C 2277 nt1.03□□□□□ -2.24
RPC40P07703 YLR269CYLR269C 351 nt1.03□□□□□ -2.24
RPC40P07703 NUT2YPR168W 474 nt1.03□□□□□ -2.24
RPC40P07703 RPF1YHR088W 888 nt1.02□□□□□ -2.25
RPC40P07703 IFH1YLR223C 3258 nt1.02□□□□□ -2.25
RPC40P07703 YMR175W-AYMR175W-A 195 nt1.02□□□□□ -2.25
RPC40P07703 SAS3YBL052C 2496 nt1.01□□□□□ -2.25
RPC40P07703 SDH2YLL041C 801 nt1.01□□□□□ -2.25
RPC40P07703 YPR153WYPR153W 423 nt1.01□□□□□ -2.25
RPC40P07703 YLL032CYLL032C 2478 nt1□□□□□ -2.25
RPC40P07703 RFX1YLR176C 2436 nt1□□□□□ -2.25
RPC40P07703 IML1YJR138W 4755 nt1□□□□□ -2.25
RPC40P07703 SPT7YBR081C 3999 nt1□□□□□ -2.25
RPC40P07703 ENV11YGR071C 2583 nt1□□□□□ -2.25
RPC40P07703 NBL1YHR199C-A 222 nt1□□□□□ -2.25
RPC40P07703 YIL059CYIL059C 366 nt1□□□□□ -2.25
RPC40P07703 YML108WYML108W 318 nt1□□□□□ -2.25
RPC40P07703 RUF22RUF22 515 nt1□□□□□ -2.25
RPC40P07703 YPL182CYPL182C 384 nt1□□□□□ -2.25
RPC40P07703 SCW11YGL028C 1629 nt1□□□□□ -2.25
RPC40P07703 YER084W-AYER084W-A 513 nt0.99□□□□□ -2.25
RPC40P07703 YHR125WYHR125W 306 nt0.99□□□□□ -2.25
RPC40P07703 YHR130CYHR130C 336 nt0.99□□□□□ -2.25
RPC40P07703 tV(UAC)BtV(UAC)B 74 nt0.99□□□□□ -2.25
RPC40P07703 tV(UAC)DtV(UAC)D 74 nt0.99□□□□□ -2.25
RPC40P07703 PHS1YJL097W 654 nt0.99□□□□□ -2.25
RPC40P07703 YAL016C-BYAL016C-B 186 nt0.99□□□□□ -2.25
RPC40P07703 IRC23YOR044W 474 nt0.99□□□□□ -2.25
RPC40P07703 SCC2YDR180W 4482 nt0.99□□□□□ -2.25
RPC40P07703 SLY1YDR189W 2001 nt0.99□□□□□ -2.25
RPC40P07703 YGR130CYGR130C 2451 nt0.98□□□□□ -2.25
RPC40P07703 SET3YKR029C 2256 nt0.98□□□□□ -2.25
RPC40P07703 YDR182W-AYDR182W-A 204 nt0.98□□□□□ -2.25
RPC40P07703 YDR269CYDR269C 324 nt0.98□□□□□ -2.25
RPC40P07703 YER087C-AYER087C-A 552 nt0.98□□□□□ -2.25
RPC40P07703 YIL066W-AYIL066W-A 444 nt0.98□□□□□ -2.25
RPC40P07703 MRPL31YKL138C 396 nt0.98□□□□□ -2.25
RPC40P07703 RPS27AYKL156W 249 nt0.98□□□□□ -2.25
RPC40P07703 UPS1YLR193C 528 nt0.98□□□□□ -2.25
RPC40P07703 YBR200W-AYBR200W-A 165 nt0.98□□□□□ -2.25
RPC40P07703 APL2YKL135C 2181 nt0.98□□□□□ -2.25
RPC40P07703 SIP4YJL089W 2490 nt0.98□□□□□ -2.25
RPC40P07703 YER076W-AYER076W-A 348 nt0.97□□□□□ -2.25
RPC40P07703 NFU1YKL040C 771 nt0.97□□□□□ -2.25
RPC40P07703 YOR199WYOR199W 330 nt0.97□□□□□ -2.25
RPC40P07703 YBR221W-AYBR221W-A 105 nt0.97□□□□□ -2.25
RPC40P07703 CYC7YEL039C 342 nt0.96□□□□□ -2.26
RPC40P07703 YML003WYML003W 873 nt0.96□□□□□ -2.26
RPC40P07703 YJR029WYJR029W 5268 nt0.96□□□□□ -2.26
RPC40P07703 YPR137C-BYPR137C-B 5268 nt0.96□□□□□ -2.26
RPC40P07703 EFR3YMR212C 2349 nt0.95□□□□□ -2.26
RPC40P07703 TTI1YKL033W 3117 nt0.95□□□□□ -2.26
RPC40P07703 YDR169C-AYDR169C-A 150 nt0.95□□□□□ -2.26
RPC40P07703 PRE4YFR050C 801 nt0.95□□□□□ -2.26
RPC40P07703 snR189snR189 189 nt0.95□□□□□ -2.26
RPC40P07703 PRP16YKR086W 3216 nt0.94□□□□□ -2.26
RPC40P07703 AIM29YKR074W 468 nt0.94□□□□□ -2.26
Retrieved 100 of 7,029 protein–RNA pairs in 7.2 ms