Protein–RNA interactions for Protein: Q6B2U8

TDA8, Topoisomerase I damage affected protein 8, yeastyeast

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TDA8Q6B2U8 YIL029CYIL029C 429 nt0.9□□□□□ -2.27
TDA8Q6B2U8 PFD1YJL179W 330 nt0.9□□□□□ -2.27
TDA8Q6B2U8 YPR099CYPR099C 357 nt0.9□□□□□ -2.27
TDA8Q6B2U8 NUT1YGL151W 3399 nt0.9□□□□□ -2.27
TDA8Q6B2U8 SWI5YDR146C 2130 nt0.89□□□□□ -2.27
TDA8Q6B2U8 GDS1YOR355W 1569 nt0.89□□□□□ -2.27
TDA8Q6B2U8 HNT1YDL125C 477 nt0.89□□□□□ -2.27
TDA8Q6B2U8 YOP1YPR028W 543 nt0.89□□□□□ -2.27
TDA8Q6B2U8 YBR071WYBR071W 636 nt0.89□□□□□ -2.27
TDA8Q6B2U8 YPR177CYPR177C 372 nt0.89□□□□□ -2.27
TDA8Q6B2U8 ZIP1YDR285W 2628 nt0.89□□□□□ -2.27
TDA8Q6B2U8 PHR1YOR386W 1698 nt0.88□□□□□ -2.27
TDA8Q6B2U8 PAN3YKL025C 2040 nt0.88□□□□□ -2.27
TDA8Q6B2U8 GMC2YLR445W 567 nt0.88□□□□□ -2.27
TDA8Q6B2U8 YBR121C-AYBR121C-A 159 nt0.88□□□□□ -2.27
TDA8Q6B2U8 LAA1YJL207C 6045 nt0.88□□□□□ -2.27
TDA8Q6B2U8 APL1YJR005W 2103 nt0.88□□□□□ -2.27
TDA8Q6B2U8 EAF1YDR359C 2949 nt0.87□□□□□ -2.27
TDA8Q6B2U8 snR78snR78 87 nt0.87□□□□□ -2.27
TDA8Q6B2U8 YDR509WYDR509W 348 nt0.87□□□□□ -2.27
TDA8Q6B2U8 PPN1YDR452W 2025 nt0.87□□□□□ -2.27
TDA8Q6B2U8 SPT21YMR179W 2277 nt0.87□□□□□ -2.27
TDA8Q6B2U8 ROM2YLR371W 4071 nt0.87□□□□□ -2.27
TDA8Q6B2U8 STB6YKL072W 2301 nt0.86□□□□□ -2.27
TDA8Q6B2U8 YDR003W-AYDR003W-A 123 nt0.86□□□□□ -2.27
TDA8Q6B2U8 PIP2YOR363C 2991 nt0.86□□□□□ -2.27
TDA8Q6B2U8 TOF2YKR010C 2316 nt0.86□□□□□ -2.27
TDA8Q6B2U8 PIG1YLR273C 1947 nt0.85□□□□□ -2.27
TDA8Q6B2U8 NUP145YGL092W 3954 nt0.85□□□□□ -2.27
TDA8Q6B2U8 SHE9YDR393W 1371 nt0.85□□□□□ -2.27
TDA8Q6B2U8 NOC3YLR002C 1992 nt0.85□□□□□ -2.27
TDA8Q6B2U8 YDR008CYDR008C 351 nt0.85□□□□□ -2.27
TDA8Q6B2U8 YBR032WYBR032W 303 nt0.85□□□□□ -2.27
TDA8Q6B2U8 MEI5YPL121C 669 nt0.85□□□□□ -2.27
TDA8Q6B2U8 APL3YBL037W 3078 nt0.85□□□□□ -2.27
TDA8Q6B2U8 FIG2YCR089W 4830 nt0.84□□□□□ -2.27
TDA8Q6B2U8 snR14snR14 160 nt0.84□□□□□ -2.27
TDA8Q6B2U8 VAM6YDL077C 3150 nt0.84□□□□□ -2.28
TDA8Q6B2U8 SCC2YDR180W 4482 nt0.84□□□□□ -2.28
TDA8Q6B2U8 CDC25YLR310C 4770 nt0.83□□□□□ -2.28
TDA8Q6B2U8 YEL057CYEL057C 702 nt0.83□□□□□ -2.28
TDA8Q6B2U8 PRM8YGL053W 714 nt0.83□□□□□ -2.28
TDA8Q6B2U8 RPL34BYIL052C 366 nt0.83□□□□□ -2.28
TDA8Q6B2U8 YKL044WYKL044W 321 nt0.83□□□□□ -2.28
TDA8Q6B2U8 BER1YLR412W 825 nt0.83□□□□□ -2.28
TDA8Q6B2U8 YPR039WYPR039W 336 nt0.83□□□□□ -2.28
TDA8Q6B2U8 MKT1YNL085W 2493 nt0.83□□□□□ -2.28
TDA8Q6B2U8 DOP1YDR141C 5097 nt0.82□□□□□ -2.28
TDA8Q6B2U8 SRP14YDL092W 441 nt0.82□□□□□ -2.28
TDA8Q6B2U8 HIT1YJR055W 495 nt0.82□□□□□ -2.28
TDA8Q6B2U8 IRC16YPR038W 360 nt0.82□□□□□ -2.28
TDA8Q6B2U8 CDC39YCR093W 6327 nt0.82□□□□□ -2.28
TDA8Q6B2U8 SPO23YBR250W 1572 nt0.82□□□□□ -2.28
TDA8Q6B2U8 MSH3YCR092C 3057 nt0.81□□□□□ -2.28
TDA8Q6B2U8 LYS14YDR034C 2373 nt0.81□□□□□ -2.28
TDA8Q6B2U8 YDR114CYDR114C 303 nt0.81□□□□□ -2.28
TDA8Q6B2U8 EMT1tM(CAU)D 73 nt0.81□□□□□ -2.28
TDA8Q6B2U8 EMT5tM(CAU)J1 73 nt0.81□□□□□ -2.28
TDA8Q6B2U8 EMT3tM(CAU)J2 73 nt0.81□□□□□ -2.28
TDA8Q6B2U8 EMT4tM(CAU)M 73 nt0.81□□□□□ -2.28
TDA8Q6B2U8 EMT2tM(CAU)O2 73 nt0.81□□□□□ -2.28
TDA8Q6B2U8 TMA22YJR014W 597 nt0.81□□□□□ -2.28
TDA8Q6B2U8 RPL33BYOR234C 324 nt0.81□□□□□ -2.28
TDA8Q6B2U8 YCL023CYCL023C 348 nt0.81□□□□□ -2.28
TDA8Q6B2U8 YLR422WYLR422W 5799 nt0.81□□□□□ -2.28
TDA8Q6B2U8 NUP192YJL039C 5052 nt0.81□□□□□ -2.28
TDA8Q6B2U8 MPT5YGL178W 2580 nt0.8□□□□□ -2.28
TDA8Q6B2U8 KAP120YPL125W 3099 nt0.8□□□□□ -2.28
TDA8Q6B2U8 YGR045CYGR045C 363 nt0.8□□□□□ -2.28
TDA8Q6B2U8 YKL068W-AYKL068W-A 237 nt0.8□□□□□ -2.28
TDA8Q6B2U8 YMR153C-AYMR153C-A 336 nt0.8□□□□□ -2.28
TDA8Q6B2U8 YNL319WYNL319W 441 nt0.8□□□□□ -2.28
TDA8Q6B2U8 YBR012CYBR012C 420 nt0.8□□□□□ -2.28
TDA8Q6B2U8 SVS1YPL163C 783 nt0.8□□□□□ -2.28
TDA8Q6B2U8 snR84snR84 550 nt0.79□□□□□ -2.28
TDA8Q6B2U8 APQ13YJL075C 417 nt0.79□□□□□ -2.28
TDA8Q6B2U8 NUT2YPR168W 474 nt0.79□□□□□ -2.28
TDA8Q6B2U8 OCA6YDR067C 675 nt0.78□□□□□ -2.28
TDA8Q6B2U8 YDR250CYDR250C 276 nt0.78□□□□□ -2.28
TDA8Q6B2U8 YFL012WYFL012W 447 nt0.78□□□□□ -2.28
TDA8Q6B2U8 YJR141WYJR141W 1044 nt0.78□□□□□ -2.28
TDA8Q6B2U8 YLR146W-AYLR146W-A 189 nt0.78□□□□□ -2.28
TDA8Q6B2U8 TMA10YLR327C 261 nt0.78□□□□□ -2.28
TDA8Q6B2U8 YMR175W-AYMR175W-A 195 nt0.78□□□□□ -2.28
TDA8Q6B2U8 SPT7YBR081C 3999 nt0.78□□□□□ -2.28
TDA8Q6B2U8 AIM44YPL158C 2277 nt0.77□□□□□ -2.29
TDA8Q6B2U8 tH(GUG)E1tH(GUG)E1 72 nt0.77□□□□□ -2.29
TDA8Q6B2U8 tH(GUG)E2tH(GUG)E2 72 nt0.77□□□□□ -2.29
TDA8Q6B2U8 tH(GUG)G1tH(GUG)G1 72 nt0.77□□□□□ -2.29
TDA8Q6B2U8 tH(GUG)G2tH(GUG)G2 72 nt0.77□□□□□ -2.29
TDA8Q6B2U8 tH(GUG)HtH(GUG)H 72 nt0.77□□□□□ -2.29
TDA8Q6B2U8 tH(GUG)KtH(GUG)K 72 nt0.77□□□□□ -2.29
TDA8Q6B2U8 tH(GUG)MtH(GUG)M 72 nt0.77□□□□□ -2.29
TDA8Q6B2U8 ILM1YJR118C 612 nt0.77□□□□□ -2.29
TDA8Q6B2U8 IRC23YOR044W 474 nt0.77□□□□□ -2.29
TDA8Q6B2U8 SPO75YLL005C 2607 nt0.76□□□□□ -2.29
TDA8Q6B2U8 ENV11YGR071C 2583 nt0.76□□□□□ -2.29
TDA8Q6B2U8 GUP1YGL084C 1683 nt0.76□□□□□ -2.29
TDA8Q6B2U8 RUF22RUF22 515 nt0.76□□□□□ -2.29
TDA8Q6B2U8 YBR221W-AYBR221W-A 105 nt0.76□□□□□ -2.29
Retrieved 100 of 7,029 protein–RNA pairs in 68.3 ms