Protein–RNA interactions for Protein: Q02260

SMD1, Small nuclear ribonucleoprotein Sm D1, yeastyeast

Predicted RBP Predictions only

Length 146 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SMD1Q02260 YLR434CYLR434C 384 nt1.36□□□□□ -2.19
SMD1Q02260 YPL182CYPL182C 384 nt1.36□□□□□ -2.19
SMD1Q02260 SPO23YBR250W 1572 nt1.36□□□□□ -2.19
SMD1Q02260 TUS1YLR425W 3924 nt1.36□□□□□ -2.19
SMD1Q02260 SSQ1YLR369W 1974 nt1.36□□□□□ -2.19
SMD1Q02260 PEP1YBL017C 4740 nt1.35□□□□□ -2.19
SMD1Q02260 VPS41YDR080W 2979 nt1.35□□□□□ -2.19
SMD1Q02260 PHS1YJL097W 654 nt1.35□□□□□ -2.19
SMD1Q02260 ATP7YKL016C 525 nt1.35□□□□□ -2.19
SMD1Q02260 YNL114CYNL114C 372 nt1.35□□□□□ -2.19
SMD1Q02260 HCH1YNL281W 462 nt1.35□□□□□ -2.19
SMD1Q02260 RPL32YBL092W 393 nt1.35□□□□□ -2.19
SMD1Q02260 YOR146WYOR146W 306 nt1.35□□□□□ -2.19
SMD1Q02260 YPL185WYPL185W 396 nt1.35□□□□□ -2.19
SMD1Q02260 YCL046WYCL046W 324 nt1.35□□□□□ -2.19
SMD1Q02260 BRR2YER172C 6492 nt1.35□□□□□ -2.19
SMD1Q02260 IRE1YHR079C 3348 nt1.34□□□□□ -2.19
SMD1Q02260 YER172C-AYER172C-A 381 nt1.34□□□□□ -2.19
SMD1Q02260 YHR028W-AYHR028W-A 321 nt1.34□□□□□ -2.19
SMD1Q02260 YHR138CYHR138C 345 nt1.34□□□□□ -2.19
SMD1Q02260 PAU18YLL064C 363 nt1.34□□□□□ -2.19
SMD1Q02260 PAU6YNR076W 363 nt1.34□□□□□ -2.19
SMD1Q02260 UTP21YLR409C 2820 nt1.34□□□□□ -2.2
SMD1Q02260 MON2YNL297C 4911 nt1.33□□□□□ -2.2
SMD1Q02260 SWI5YDR146C 2130 nt1.33□□□□□ -2.2
SMD1Q02260 VPS34YLR240W 2628 nt1.33□□□□□ -2.2
SMD1Q02260 YDL011CYDL011C 324 nt1.33□□□□□ -2.2
SMD1Q02260 YER088C-AYER088C-A 324 nt1.33□□□□□ -2.2
SMD1Q02260 YAR047CYAR047C 321 nt1.33□□□□□ -2.2
SMD1Q02260 YOR053WYOR053W 342 nt1.33□□□□□ -2.2
SMD1Q02260 OSH6YKR003W 1347 nt1.33□□□□□ -2.2
SMD1Q02260 MSC6YOR354C 2079 nt1.33□□□□□ -2.2
SMD1Q02260 YJR039WYJR039W 3366 nt1.32□□□□□ -2.2
SMD1Q02260 TFC8YPL007C 1767 nt1.32□□□□□ -2.2
SMD1Q02260 MMS22YLR320W 4365 nt1.32□□□□□ -2.2
SMD1Q02260 RPL26AYLR344W 384 nt1.32□□□□□ -2.2
SMD1Q02260 FMP23YBR047W 528 nt1.32□□□□□ -2.2
SMD1Q02260 SEC63YOR254C 1992 nt1.32□□□□□ -2.2
SMD1Q02260 YGR250CYGR250C 2346 nt1.32□□□□□ -2.2
SMD1Q02260 PEX8YGR077C 1770 nt1.31□□□□□ -2.2
SMD1Q02260 YFR016CYFR016C 3702 nt1.31□□□□□ -2.2
SMD1Q02260 NAB6YML117W 3405 nt1.31□□□□□ -2.2
SMD1Q02260 PCF11YDR228C 1881 nt1.31□□□□□ -2.2
SMD1Q02260 PAU3YCR104W 375 nt1.31□□□□□ -2.2
SMD1Q02260 YDR008CYDR008C 351 nt1.31□□□□□ -2.2
SMD1Q02260 TIM13YGR181W 318 nt1.31□□□□□ -2.2
SMD1Q02260 GUP1YGL084C 1683 nt1.31□□□□□ -2.2
SMD1Q02260 SBE22YHR103W 2559 nt1.3□□□□□ -2.2
SMD1Q02260 YDR118W-AYDR118W-A 117 nt1.3□□□□□ -2.2
SMD1Q02260 YAP6YDR259C 1152 nt1.3□□□□□ -2.2
SMD1Q02260 EMP24YGL200C 612 nt1.3□□□□□ -2.2
SMD1Q02260 YJL020W-AYJL020W-A 258 nt1.3□□□□□ -2.2
SMD1Q02260 RPS27AYKL156W 249 nt1.3□□□□□ -2.2
SMD1Q02260 YAL068W-AYAL068W-A 255 nt1.3□□□□□ -2.2
SMD1Q02260 BSC3YLR465C 309 nt1.3□□□□□ -2.2
SMD1Q02260 RPL9BYNL067W 576 nt1.3□□□□□ -2.2
SMD1Q02260 YBL108WYBL108W 306 nt1.3□□□□□ -2.2
SMD1Q02260 HDA3YPR179C 1968 nt1.3□□□□□ -2.2
SMD1Q02260 FRK1YPL141C 2598 nt1.3□□□□□ -2.2
SMD1Q02260 YLR419WYLR419W 4308 nt1.3□□□□□ -2.2
SMD1Q02260 CTR9YOL145C 3234 nt1.29□□□□□ -2.2
SMD1Q02260 YER137W-AYER137W-A 306 nt1.29□□□□□ -2.2
SMD1Q02260 SEY1YOR165W 2331 nt1.29□□□□□ -2.2
SMD1Q02260 RLM1YPL089C 2031 nt1.28□□□□□ -2.2
SMD1Q02260 GYP5YPL249C 2685 nt1.28□□□□□ -2.2
SMD1Q02260 TDA9YML081W 3756 nt1.28□□□□□ -2.2
SMD1Q02260 SRP14YDL092W 441 nt1.28□□□□□ -2.2
SMD1Q02260 DAD4YDR320C-A 219 nt1.28□□□□□ -2.2
SMD1Q02260 YKL083WYKL083W 615 nt1.28□□□□□ -2.2
SMD1Q02260 YPR170W-AYPR170W-A 186 nt1.28□□□□□ -2.2
SMD1Q02260 PXA2YKL188C 2562 nt1.28□□□□□ -2.2
SMD1Q02260 NOP53YPL146C 1368 nt1.27□□□□□ -2.21
SMD1Q02260 SEC31YDL195W 3822 nt1.27□□□□□ -2.21
SMD1Q02260 YDR003W-AYDR003W-A 123 nt1.27□□□□□ -2.21
SMD1Q02260 YLR146W-AYLR146W-A 189 nt1.27□□□□□ -2.21
SMD1Q02260 ISF1YMR081C 1017 nt1.27□□□□□ -2.21
SMD1Q02260 YBL073WYBL073W 312 nt1.27□□□□□ -2.21
SMD1Q02260 MAK10YEL053C 2202 nt1.27□□□□□ -2.21
SMD1Q02260 IRR1YIL026C 3453 nt1.27□□□□□ -2.21
SMD1Q02260 ZRG17YNR039C 1818 nt1.26□□□□□ -2.21
SMD1Q02260 DCP2YNL118C 2913 nt1.26□□□□□ -2.21
SMD1Q02260 YOR019WYOR019W 2193 nt1.26□□□□□ -2.21
SMD1Q02260 RPL31AYDL075W 342 nt1.26□□□□□ -2.21
SMD1Q02260 PRE4YFR050C 801 nt1.26□□□□□ -2.21
SMD1Q02260 YGR265WYGR265W 411 nt1.26□□□□□ -2.21
SMD1Q02260 ABM1YJR108W 372 nt1.26□□□□□ -2.21
SMD1Q02260 AIM9YER080W 1884 nt1.26□□□□□ -2.21
SMD1Q02260 MDM20YOL076W 2391 nt1.26□□□□□ -2.21
SMD1Q02260 HMI1YOL095C 2121 nt1.25□□□□□ -2.21
SMD1Q02260 RTP1YMR185W 2946 nt1.25□□□□□ -2.21
SMD1Q02260 TRX1YLR043C 312 nt1.25□□□□□ -2.21
SMD1Q02260 YLR334CYLR334C 381 nt1.25□□□□□ -2.21
SMD1Q02260 YMR230W-AYMR230W-A 189 nt1.25□□□□□ -2.21
SMD1Q02260 HHT1YBR010W 411 nt1.25□□□□□ -2.21
SMD1Q02260 YOP1YPR028W 543 nt1.25□□□□□ -2.21
SMD1Q02260 SWI6YLR182W 2412 nt1.25□□□□□ -2.21
SMD1Q02260 ATG31YDR022C 591 nt1.24□□□□□ -2.21
SMD1Q02260 CYC7YEL039C 342 nt1.24□□□□□ -2.21
SMD1Q02260 YHL041WYHL041W 450 nt1.24□□□□□ -2.21
SMD1Q02260 YMR272W-BYMR272W-B 108 nt1.24□□□□□ -2.21
Retrieved 100 of 7,029 protein–RNA pairs in 103.7 ms