Protein–RNA interactions for Protein: P53882

TDA7, Topoisomerase I damage affected protein 7, yeastyeast

Predicted RBP Predictions only

Length 636 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TDA7P53882 DAD3YBR233W-A 285 nt1.98□□□□□ -2.09
TDA7P53882 VMA9YCL005W-A 222 nt1.98□□□□□ -2.09
TDA7P53882 SPF1YEL031W 3648 nt1.98□□□□□ -2.09
TDA7P53882 TRS130YMR218C 3309 nt1.97□□□□□ -2.09
TDA7P53882 SIR3YLR442C 2937 nt1.97□□□□□ -2.09
TDA7P53882 SAP185YJL098W 3177 nt1.97□□□□□ -2.09
TDA7P53882 PEP3YLR148W 2757 nt1.97□□□□□ -2.09
TDA7P53882 YDR169C-AYDR169C-A 150 nt1.97□□□□□ -2.09
TDA7P53882 RPA34YJL148W 702 nt1.97□□□□□ -2.09
TDA7P53882 SEF1YBL066C 3447 nt1.97□□□□□ -2.09
TDA7P53882 UBR1YGR184C 5853 nt1.96□□□□□ -2.1
TDA7P53882 MLH1YMR167W 2310 nt1.96□□□□□ -2.1
TDA7P53882 RPL35AYDL191W 363 nt1.96□□□□□ -2.1
TDA7P53882 YPR010C-AYPR010C-A 219 nt1.96□□□□□ -2.1
TDA7P53882 VMR1YHL035C 4779 nt1.96□□□□□ -2.1
TDA7P53882 IRA2YOL081W 9240 nt1.96□□□□□ -2.1
TDA7P53882 YBR184WYBR184W 1572 nt1.96□□□□□ -2.1
TDA7P53882 RAV1YJR033C 4074 nt1.96□□□□□ -2.1
TDA7P53882 SMY1YKL079W 1971 nt1.96□□□□□ -2.1
TDA7P53882 MGM1YOR211C 2646 nt1.95□□□□□ -2.1
TDA7P53882 SCH9YHR205W 2475 nt1.95□□□□□ -2.1
TDA7P53882 DFG16YOR030W 1860 nt1.95□□□□□ -2.1
TDA7P53882 NUP100YKL068W 2880 nt1.95□□□□□ -2.1
TDA7P53882 YFL063WYFL063W 456 nt1.95□□□□□ -2.1
TDA7P53882 YIL059CYIL059C 366 nt1.95□□□□□ -2.1
TDA7P53882 PAU8YAL068C 363 nt1.95□□□□□ -2.1
TDA7P53882 YAR029WYAR029W 225 nt1.95□□□□□ -2.1
TDA7P53882 TAR1YLR154W-C 375 nt1.95□□□□□ -2.1
TDA7P53882 IRC20YLR247C 4671 nt1.95□□□□□ -2.1
TDA7P53882 PAU20YOL161C 363 nt1.95□□□□□ -2.1
TDA7P53882 DNF1YER166W 4716 nt1.95□□□□□ -2.1
TDA7P53882 BNI1YNL271C 5862 nt1.95□□□□□ -2.1
TDA7P53882 YOL098CYOL098C 3114 nt1.94□□□□□ -2.1
TDA7P53882 YCR022CYCR022C 345 nt1.94□□□□□ -2.1
TDA7P53882 YDR008CYDR008C 351 nt1.94□□□□□ -2.1
TDA7P53882 YDR286CYDR286C 345 nt1.94□□□□□ -2.1
TDA7P53882 YHL041WYHL041W 450 nt1.94□□□□□ -2.1
TDA7P53882 YOR394C-AYOR394C-A 168 nt1.94□□□□□ -2.1
TDA7P53882 OSH6YKR003W 1347 nt1.93□□□□□ -2.1
TDA7P53882 ARP7YPR034W 1434 nt1.93□□□□□ -2.1
TDA7P53882 MMS22YLR320W 4365 nt1.93□□□□□ -2.1
TDA7P53882 KRE33YNL132W 3171 nt1.93□□□□□ -2.1
TDA7P53882 YLR154W-AYLR154W-A 186 nt1.93□□□□□ -2.1
TDA7P53882 YBL083CYBL083C 426 nt1.93□□□□□ -2.1
TDA7P53882 YOR333CYOR333C 417 nt1.93□□□□□ -2.1
TDA7P53882 MNL2YLR057W 2550 nt1.93□□□□□ -2.1
TDA7P53882 SET2YJL168C 2202 nt1.93□□□□□ -2.1
TDA7P53882 MET18YIL128W 3099 nt1.92□□□□□ -2.1
TDA7P53882 RPS17AYML024W 411 nt1.92□□□□□ -2.1
TDA7P53882 YMR290W-AYMR290W-A 348 nt1.92□□□□□ -2.1
TDA7P53882 HHT1YBR010W 411 nt1.92□□□□□ -2.1
TDA7P53882 SAR1YPL218W 573 nt1.92□□□□□ -2.1
TDA7P53882 SNF5YBR289W 2718 nt1.92□□□□□ -2.1
TDA7P53882 HOP2YGL033W 657 nt1.91□□□□□ -2.1
TDA7P53882 DGR1YNL130C-A 147 nt1.91□□□□□ -2.1
TDA7P53882 IRC8YJL051W 2469 nt1.9□□□□□ -2.11
TDA7P53882 SEC31YDL195W 3822 nt1.9□□□□□ -2.11
TDA7P53882 HTB2YBL002W 396 nt1.9□□□□□ -2.11
TDA7P53882 YOR282WYOR282W 321 nt1.9□□□□□ -2.11
TDA7P53882 VPS34YLR240W 2628 nt1.9□□□□□ -2.11
TDA7P53882 IRR1YIL026C 3453 nt1.9□□□□□ -2.11
TDA7P53882 MNE1YOR350C 1992 nt1.89□□□□□ -2.11
TDA7P53882 MRP10YDL045W-A 288 nt1.89□□□□□ -2.11
TDA7P53882 RPL42BYHR141C 321 nt1.89□□□□□ -2.11
TDA7P53882 YNL114CYNL114C 372 nt1.89□□□□□ -2.11
TDA7P53882 RPL42AYNL162W 321 nt1.89□□□□□ -2.11
TDA7P53882 SLM1YIL105C 2061 nt1.89□□□□□ -2.11
TDA7P53882 NOP53YPL146C 1368 nt1.88□□□□□ -2.11
TDA7P53882 YCR043CYCR043C 384 nt1.88□□□□□ -2.11
TDA7P53882 NUT2YPR168W 474 nt1.88□□□□□ -2.11
TDA7P53882 GRR1YJR090C 3456 nt1.88□□□□□ -2.11
TDA7P53882 VPH1YOR270C 2523 nt1.88□□□□□ -2.11
TDA7P53882 RTT107YHR154W 3213 nt1.88□□□□□ -2.11
TDA7P53882 SFB2YNL049C 2631 nt1.87□□□□□ -2.11
TDA7P53882 HSH155YMR288W 2916 nt1.87□□□□□ -2.11
TDA7P53882 RIM20YOR275C 1986 nt1.87□□□□□ -2.11
TDA7P53882 YDR048CYDR048C 315 nt1.87□□□□□ -2.11
TDA7P53882 ZRG8YER033C 3231 nt1.87□□□□□ -2.11
TDA7P53882 RPL38YLR325C 237 nt1.87□□□□□ -2.11
TDA7P53882 PXA2YKL188C 2562 nt1.87□□□□□ -2.11
TDA7P53882 NEO1YIL048W 3456 nt1.86□□□□□ -2.11
TDA7P53882 HTL1YCR020W-B 237 nt1.86□□□□□ -2.11
TDA7P53882 YDR366CYDR366C 399 nt1.86□□□□□ -2.11
TDA7P53882 YGL149WYGL149W 306 nt1.86□□□□□ -2.11
TDA7P53882 YLR146W-AYLR146W-A 189 nt1.86□□□□□ -2.11
TDA7P53882 TOF1YNL273W 3717 nt1.86□□□□□ -2.11
TDA7P53882 VPS8YAL002W 3825 nt1.86□□□□□ -2.11
TDA7P53882 EFR3YMR212C 2349 nt1.85□□□□□ -2.11
TDA7P53882 HDA3YPR179C 1968 nt1.85□□□□□ -2.11
TDA7P53882 YRB1YDR002W 606 nt1.85□□□□□ -2.11
TDA7P53882 TIM9YEL020W-A 264 nt1.85□□□□□ -2.11
TDA7P53882 YKL183C-AYKL183C-A 213 nt1.85□□□□□ -2.11
TDA7P53882 UPS1YLR193C 528 nt1.85□□□□□ -2.11
TDA7P53882 RPH1YER169W 2391 nt1.85□□□□□ -2.11
TDA7P53882 YDL062WYDL062W 426 nt1.84□□□□□ -2.11
TDA7P53882 CYC7YEL039C 342 nt1.84□□□□□ -2.11
TDA7P53882 YKL165C-AYKL165C-A 234 nt1.84□□□□□ -2.11
TDA7P53882 YLR053CYLR053C 327 nt1.84□□□□□ -2.11
TDA7P53882 YMR141W-AYMR141W-A 225 nt1.84□□□□□ -2.11
TDA7P53882 SPP41YDR464W 4308 nt1.84□□□□□ -2.11
Retrieved 100 of 7,029 protein–RNA pairs in 64.4 ms