Protein–RNA interactions for Protein: P53538

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, yeastyeast

Predicted RBP Predictions only

Length 206 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SSU72P53538 YBR184WYBR184W 1572 nt1.28□□□□□ -2.2
SSU72P53538 RSM22YKL155C 1887 nt1.28□□□□□ -2.2
SSU72P53538 ZRG8YER033C 3231 nt1.28□□□□□ -2.21
SSU72P53538 DOT6YER088C 2013 nt1.27□□□□□ -2.21
SSU72P53538 QCR7YDR529C 384 nt1.27□□□□□ -2.21
SSU72P53538 YER006C-AYER006C-A 318 nt1.27□□□□□ -2.21
SSU72P53538 YIL102CYIL102C 306 nt1.27□□□□□ -2.21
SSU72P53538 TMA22YJR014W 597 nt1.27□□□□□ -2.21
SSU72P53538 YMR153C-AYMR153C-A 336 nt1.27□□□□□ -2.21
SSU72P53538 YBR032WYBR032W 303 nt1.27□□□□□ -2.21
SSU72P53538 YPL205CYPL205C 345 nt1.27□□□□□ -2.21
SSU72P53538 DAS1YJL149W 1992 nt1.27□□□□□ -2.21
SSU72P53538 YER076W-AYER076W-A 348 nt1.26□□□□□ -2.21
SSU72P53538 YER135CYER135C 393 nt1.26□□□□□ -2.21
SSU72P53538 YLR101CYLR101C 396 nt1.26□□□□□ -2.21
SSU72P53538 YBR121C-AYBR121C-A 159 nt1.26□□□□□ -2.21
SSU72P53538 YJR098CYJR098C 1971 nt1.26□□□□□ -2.21
SSU72P53538 SEF1YBL066C 3447 nt1.26□□□□□ -2.21
SSU72P53538 YJL015CYJL015C 285 nt1.25□□□□□ -2.21
SSU72P53538 NFU1YKL040C 771 nt1.25□□□□□ -2.21
SSU72P53538 COA6YMR244C-A 315 nt1.25□□□□□ -2.21
SSU72P53538 TIF11YMR260C 462 nt1.25□□□□□ -2.21
SSU72P53538 ZEO1YOL109W 342 nt1.25□□□□□ -2.21
SSU72P53538 MSN5YDR335W 3675 nt1.25□□□□□ -2.21
SSU72P53538 KAP122YGL016W 3246 nt1.25□□□□□ -2.21
SSU72P53538 CAT8YMR280C 4302 nt1.24□□□□□ -2.21
SSU72P53538 NUP192YJL039C 5052 nt1.24□□□□□ -2.21
SSU72P53538 YDL152WYDL152W 366 nt1.24□□□□□ -2.21
SSU72P53538 YER023C-AYER023C-A 213 nt1.24□□□□□ -2.21
SSU72P53538 CRG1YHR209W 876 nt1.24□□□□□ -2.21
SSU72P53538 URM1YIL008W 300 nt1.24□□□□□ -2.21
SSU72P53538 YKL183C-AYKL183C-A 213 nt1.24□□□□□ -2.21
SSU72P53538 CGI121YML036W 546 nt1.24□□□□□ -2.21
SSU72P53538 YPR099CYPR099C 357 nt1.24□□□□□ -2.21
SSU72P53538 EST2YLR318W 2655 nt1.24□□□□□ -2.21
SSU72P53538 MLH3YPL164C 2148 nt1.24□□□□□ -2.21
SSU72P53538 YKL063CYKL063C 504 nt1.23□□□□□ -2.21
SSU72P53538 YML009C-AYML009C-A 327 nt1.23□□□□□ -2.21
SSU72P53538 ERP4YOR016C 624 nt1.23□□□□□ -2.21
SSU72P53538 PAN3YKL025C 2040 nt1.23□□□□□ -2.21
SSU72P53538 GNT1YOR320C 1476 nt1.23□□□□□ -2.21
SSU72P53538 CTR9YOL145C 3234 nt1.23□□□□□ -2.21
SSU72P53538 YER087C-AYER087C-A 552 nt1.22□□□□□ -2.21
SSU72P53538 YER088C-AYER088C-A 324 nt1.22□□□□□ -2.21
SSU72P53538 tQ(UUG)E2tQ(UUG)E2 72 nt1.22□□□□□ -2.21
SSU72P53538 RPL42BYHR141C 321 nt1.22□□□□□ -2.21
SSU72P53538 RPL42AYNL162W 321 nt1.22□□□□□ -2.21
SSU72P53538 SFB2YNL049C 2631 nt1.21□□□□□ -2.22
SSU72P53538 GDS1YOR355W 1569 nt1.21□□□□□ -2.22
SSU72P53538 SPC98YNL126W 2541 nt1.21□□□□□ -2.22
SSU72P53538 YJR157WYJR157W 363 nt1.21□□□□□ -2.22
SSU72P53538 RRT15YLR162W-A 189 nt1.21□□□□□ -2.22
SSU72P53538 YNL324WYNL324W 396 nt1.21□□□□□ -2.22
SSU72P53538 YPR177CYPR177C 372 nt1.21□□□□□ -2.22
SSU72P53538 YLR422WYLR422W 5799 nt1.21□□□□□ -2.22
SSU72P53538 YGR250CYGR250C 2346 nt1.21□□□□□ -2.22
SSU72P53538 TOF2YKR010C 2316 nt1.21□□□□□ -2.22
SSU72P53538 MAD1YGL086W 2250 nt1.2□□□□□ -2.22
SSU72P53538 NCA2YPR155C 1851 nt1.2□□□□□ -2.22
SSU72P53538 RAD9YDR217C 3930 nt1.2□□□□□ -2.22
SSU72P53538 MKT1YNL085W 2493 nt1.2□□□□□ -2.22
SSU72P53538 YLR406C-AYLR406C-A 150 nt1.2□□□□□ -2.22
SSU72P53538 YNL114CYNL114C 372 nt1.2□□□□□ -2.22
SSU72P53538 YOL159C-AYOL159C-A 273 nt1.2□□□□□ -2.22
SSU72P53538 FMP23YBR047W 528 nt1.2□□□□□ -2.22
SSU72P53538 IRR1YIL026C 3453 nt1.2□□□□□ -2.22
SSU72P53538 ALK1YGL021W 2283 nt1.19□□□□□ -2.22
SSU72P53538 MSC6YOR354C 2079 nt1.19□□□□□ -2.22
SSU72P53538 YGL239CYGL239C 315 nt1.19□□□□□ -2.22
SSU72P53538 YLR264C-AYLR264C-A 117 nt1.19□□□□□ -2.22
SSU72P53538 RUF22RUF22 515 nt1.19□□□□□ -2.22
SSU72P53538 YBL071CYBL071C 309 nt1.19□□□□□ -2.22
SSU72P53538 YOR192C-CYOR192C-C 237 nt1.19□□□□□ -2.22
SSU72P53538 YPL182CYPL182C 384 nt1.19□□□□□ -2.22
SSU72P53538 MSH5YDL154W 2706 nt1.19□□□□□ -2.22
SSU72P53538 NST1YNL091W 3723 nt1.18□□□□□ -2.22
SSU72P53538 DIE2YGR227W 1578 nt1.18□□□□□ -2.22
SSU72P53538 YLR287CYLR287C 1068 nt1.18□□□□□ -2.22
SSU72P53538 YBL073WYBL073W 312 nt1.18□□□□□ -2.22
SSU72P53538 PRM3YPL192C 402 nt1.18□□□□□ -2.22
SSU72P53538 YDR509WYDR509W 348 nt1.17□□□□□ -2.22
SSU72P53538 YHR028W-AYHR028W-A 321 nt1.17□□□□□ -2.22
SSU72P53538 YIL020C-AYIL020C-A 339 nt1.17□□□□□ -2.22
SSU72P53538 PFD1YJL179W 330 nt1.17□□□□□ -2.22
SSU72P53538 YLR222C-AYLR222C-A 231 nt1.17□□□□□ -2.22
SSU72P53538 AHC1YOR023C 1701 nt1.16□□□□□ -2.22
SSU72P53538 CBS1YDL069C 690 nt1.16□□□□□ -2.22
SSU72P53538 YGR042WYGR042W 816 nt1.16□□□□□ -2.22
SSU72P53538 YHL009W-AYHL009W-A 1242 nt1.16□□□□□ -2.22
SSU72P53538 ABM1YJR108W 372 nt1.16□□□□□ -2.22
SSU72P53538 PAU18YLL064C 363 nt1.16□□□□□ -2.22
SSU72P53538 PAU6YNR076W 363 nt1.16□□□□□ -2.22
SSU72P53538 MDS3YGL197W 4464 nt1.16□□□□□ -2.22
SSU72P53538 RLM1YPL089C 2031 nt1.16□□□□□ -2.22
SSU72P53538 MAK10YEL053C 2202 nt1.16□□□□□ -2.22
SSU72P53538 SWI5YDR146C 2130 nt1.15□□□□□ -2.23
SSU72P53538 YDR008CYDR008C 351 nt1.15□□□□□ -2.23
SSU72P53538 SDH7YDR511W 402 nt1.15□□□□□ -2.23
SSU72P53538 YGR265WYGR265W 411 nt1.15□□□□□ -2.23
SSU72P53538 YIL066W-AYIL066W-A 444 nt1.15□□□□□ -2.23
Retrieved 100 of 7,029 protein–RNA pairs in 18.8 ms