Protein–RNA interactions for Protein: P53044

UFD1, Ubiquitin fusion degradation protein 1, yeastyeast

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
UFD1P53044 YBR032WYBR032W 303 nt1.35□□□□□ -2.19
UFD1P53044 YPR099CYPR099C 357 nt1.35□□□□□ -2.19
UFD1P53044 SEC63YOR254C 1992 nt1.35□□□□□ -2.19
UFD1P53044 YER023C-AYER023C-A 213 nt1.34□□□□□ -2.19
UFD1P53044 URM1YIL008W 300 nt1.34□□□□□ -2.19
UFD1P53044 TMA22YJR014W 597 nt1.34□□□□□ -2.19
UFD1P53044 FRK1YPL141C 2598 nt1.34□□□□□ -2.2
UFD1P53044 PAN3YKL025C 2040 nt1.33□□□□□ -2.2
UFD1P53044 MMS22YLR320W 4365 nt1.33□□□□□ -2.2
UFD1P53044 PIK1YNL267W 3201 nt1.33□□□□□ -2.2
UFD1P53044 YER006C-AYER006C-A 318 nt1.33□□□□□ -2.2
UFD1P53044 ANS1YHR126C 480 nt1.33□□□□□ -2.2
UFD1P53044 MCM22YJR135C 720 nt1.33□□□□□ -2.2
UFD1P53044 YGR250CYGR250C 2346 nt1.33□□□□□ -2.2
UFD1P53044 SEY1YOR165W 2331 nt1.33□□□□□ -2.2
UFD1P53044 KCS1YDR017C 3153 nt1.33□□□□□ -2.2
UFD1P53044 YDL152WYDL152W 366 nt1.32□□□□□ -2.2
UFD1P53044 YER088C-AYER088C-A 324 nt1.32□□□□□ -2.2
UFD1P53044 YIL102CYIL102C 306 nt1.32□□□□□ -2.2
UFD1P53044 NFU1YKL040C 771 nt1.32□□□□□ -2.2
UFD1P53044 YLR101CYLR101C 396 nt1.32□□□□□ -2.2
UFD1P53044 VPS20YMR077C 666 nt1.32□□□□□ -2.2
UFD1P53044 SPO24YPR036W-A 204 nt1.32□□□□□ -2.2
UFD1P53044 HKR1YDR420W 5409 nt1.32□□□□□ -2.2
UFD1P53044 MSC6YOR354C 2079 nt1.31□□□□□ -2.2
UFD1P53044 GNT1YOR320C 1476 nt1.31□□□□□ -2.2
UFD1P53044 SXM1YDR395W 2835 nt1.31□□□□□ -2.2
UFD1P53044 YER076W-AYER076W-A 348 nt1.31□□□□□ -2.2
UFD1P53044 ZEO1YOL109W 342 nt1.31□□□□□ -2.2
UFD1P53044 YOR192C-CYOR192C-C 237 nt1.31□□□□□ -2.2
UFD1P53044 FMP23YBR047W 528 nt1.31□□□□□ -2.2
UFD1P53044 YCL046WYCL046W 324 nt1.31□□□□□ -2.2
UFD1P53044 CTR9YOL145C 3234 nt1.3□□□□□ -2.2
UFD1P53044 TRX1YLR043C 312 nt1.3□□□□□ -2.2
UFD1P53044 YOR032W-AYOR032W-A 201 nt1.3□□□□□ -2.2
UFD1P53044 PMD1YER132C 5262 nt1.3□□□□□ -2.2
UFD1P53044 CAT8YMR280C 4302 nt1.3□□□□□ -2.2
UFD1P53044 ADR1YDR216W 3972 nt1.3□□□□□ -2.2
UFD1P53044 SWI5YDR146C 2130 nt1.29□□□□□ -2.2
UFD1P53044 tQ(UUG)E2tQ(UUG)E2 72 nt1.29□□□□□ -2.2
UFD1P53044 YHL037CYHL037C 402 nt1.29□□□□□ -2.2
UFD1P53044 YJL007CYJL007C 315 nt1.29□□□□□ -2.2
UFD1P53044 YML009C-AYML009C-A 327 nt1.29□□□□□ -2.2
UFD1P53044 YNL114CYNL114C 372 nt1.29□□□□□ -2.2
UFD1P53044 TOF2YKR010C 2316 nt1.29□□□□□ -2.2
UFD1P53044 RLM1YPL089C 2031 nt1.28□□□□□ -2.2
UFD1P53044 YER087C-AYER087C-A 552 nt1.28□□□□□ -2.2
UFD1P53044 PAU18YLL064C 363 nt1.28□□□□□ -2.2
UFD1P53044 PAU6YNR076W 363 nt1.28□□□□□ -2.2
UFD1P53044 YPL205CYPL205C 345 nt1.28□□□□□ -2.2
UFD1P53044 YPR177CYPR177C 372 nt1.28□□□□□ -2.2
UFD1P53044 OSH6YKR003W 1347 nt1.28□□□□□ -2.2
UFD1P53044 NOP53YPL146C 1368 nt1.28□□□□□ -2.2
UFD1P53044 SEC21YNL287W 2808 nt1.28□□□□□ -2.2
UFD1P53044 MDM20YOL076W 2391 nt1.27□□□□□ -2.21
UFD1P53044 HMI1YOL095C 2121 nt1.27□□□□□ -2.21
UFD1P53044 YDR509WYDR509W 348 nt1.27□□□□□ -2.21
UFD1P53044 PFD1YJL179W 330 nt1.27□□□□□ -2.21
UFD1P53044 YJR157WYJR157W 363 nt1.27□□□□□ -2.21
UFD1P53044 RUF22RUF22 515 nt1.27□□□□□ -2.21
UFD1P53044 PBY1YBR094W 2262 nt1.27□□□□□ -2.21
UFD1P53044 DCP2YNL118C 2913 nt1.26□□□□□ -2.21
UFD1P53044 MAK10YEL053C 2202 nt1.26□□□□□ -2.21
UFD1P53044 YHR028W-AYHR028W-A 321 nt1.26□□□□□ -2.21
UFD1P53044 YLR287CYLR287C 1068 nt1.26□□□□□ -2.21
UFD1P53044 YBL071CYBL071C 309 nt1.26□□□□□ -2.21
UFD1P53044 YLR419WYLR419W 4308 nt1.25□□□□□ -2.21
UFD1P53044 HDA3YPR179C 1968 nt1.25□□□□□ -2.21
UFD1P53044 MKT1YNL085W 2493 nt1.25□□□□□ -2.21
UFD1P53044 YGL239CYGL239C 315 nt1.25□□□□□ -2.21
UFD1P53044 YBL073WYBL073W 312 nt1.25□□□□□ -2.21
UFD1P53044 CDC31YOR257W 486 nt1.25□□□□□ -2.21
UFD1P53044 GDS1YOR355W 1569 nt1.25□□□□□ -2.21
UFD1P53044 NUP120YKL057C 3114 nt1.24□□□□□ -2.21
UFD1P53044 MSH3YCR092C 3057 nt1.24□□□□□ -2.21
UFD1P53044 CDC36YDL165W 576 nt1.24□□□□□ -2.21
UFD1P53044 PHS1YJL097W 654 nt1.24□□□□□ -2.21
UFD1P53044 RPL32YBL092W 393 nt1.24□□□□□ -2.21
UFD1P53044 ERP4YOR016C 624 nt1.24□□□□□ -2.21
UFD1P53044 SKI3YPR189W 4299 nt1.24□□□□□ -2.21
UFD1P53044 DIE2YGR227W 1578 nt1.23□□□□□ -2.21
UFD1P53044 CBS1YDL069C 690 nt1.23□□□□□ -2.21
UFD1P53044 SRP14YDL092W 441 nt1.23□□□□□ -2.21
UFD1P53044 YGR265WYGR265W 411 nt1.23□□□□□ -2.21
UFD1P53044 YIL066W-AYIL066W-A 444 nt1.23□□□□□ -2.21
UFD1P53044 ABM1YJR108W 372 nt1.23□□□□□ -2.21
UFD1P53044 CTF4YPR135W 2784 nt1.23□□□□□ -2.21
UFD1P53044 ZRG17YNR039C 1818 nt1.22□□□□□ -2.21
UFD1P53044 YDR008CYDR008C 351 nt1.22□□□□□ -2.21
UFD1P53044 YLR406C-AYLR406C-A 150 nt1.22□□□□□ -2.21
UFD1P53044 YPL182CYPL182C 384 nt1.22□□□□□ -2.21
UFD1P53044 SPC98YNL126W 2541 nt1.22□□□□□ -2.21
UFD1P53044 ZIP1YDR285W 2628 nt1.21□□□□□ -2.22
UFD1P53044 YDR003W-AYDR003W-A 123 nt1.21□□□□□ -2.22
UFD1P53044 YOL159CYOL159C 516 nt1.21□□□□□ -2.22
UFD1P53044 AHC1YOR023C 1701 nt1.2□□□□□ -2.22
UFD1P53044 MSH5YDL154W 2706 nt1.2□□□□□ -2.22
UFD1P53044 RPS27AYKL156W 249 nt1.2□□□□□ -2.22
UFD1P53044 YLR140WYLR140W 327 nt1.2□□□□□ -2.22
UFD1P53044 HCH1YNL281W 462 nt1.2□□□□□ -2.22
Retrieved 100 of 7,029 protein–RNA pairs in 28.3 ms