Protein–RNA interactions for Protein: P52593

NUP188, Nucleoporin NUP188, yeastyeast

Known RBP Predictions only

Length 1,655 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
NUP188P52593 YEL010WYEL010W 351 nt-0.63□□□□□ -2.51
NUP188P52593 RAD6YGL058W 519 nt-0.63□□□□□ -2.51
NUP188P52593 HSK3YKL138C-A 210 nt-0.63□□□□□ -2.51
NUP188P52593 YPD1YDL235C 504 nt-0.64□□□□□ -2.51
NUP188P52593 NPR2YEL062W 1848 nt-0.64□□□□□ -2.51
NUP188P52593 NME1NME1 340 nt-0.65□□□□□ -2.51
NUP188P52593 YTH1YPR107C 627 nt-0.65□□□□□ -2.51
NUP188P52593 PET111YMR257C 2403 nt-0.65□□□□□ -2.51
NUP188P52593 VPS52YDR484W 1926 nt-0.65□□□□□ -2.51
NUP188P52593 HYM1YKL189W 1200 nt-0.65□□□□□ -2.51
NUP188P52593 YOR394C-AYOR394C-A 168 nt-0.65□□□□□ -2.51
NUP188P52593 RCO1YMR075W 2055 nt-0.66□□□□□ -2.52
NUP188P52593 YNL144W-AYNL144W-A 84 nt-0.66□□□□□ -2.52
NUP188P52593 ARL3YPL051W 597 nt-0.66□□□□□ -2.52
NUP188P52593 DSE1YER124C 1722 nt-0.67□□□□□ -2.52
NUP188P52593 CDC10YCR002C 969 nt-0.67□□□□□ -2.52
NUP188P52593 CUL3YGR003W 2235 nt-0.68□□□□□ -2.52
NUP188P52593 YIR030W-AYIR030W-A 384 nt-0.69□□□□□ -2.52
NUP188P52593 YOR169CYOR169C 465 nt-0.69□□□□□ -2.52
NUP188P52593 ECM11YDR446W 909 nt-0.7□□□□□ -2.52
NUP188P52593 SLD5YDR489W 885 nt-0.7□□□□□ -2.52
NUP188P52593 YHR145CYHR145C 357 nt-0.71□□□□□ -2.52
NUP188P52593 tT(UGU)G1tT(UGU)G1 72 nt-0.71□□□□□ -2.52
NUP188P52593 tT(UGU)G2tT(UGU)G2 72 nt-0.71□□□□□ -2.52
NUP188P52593 tT(UGU)PtT(UGU)P 72 nt-0.71□□□□□ -2.52
NUP188P52593 YGL138CYGL138C 1038 nt-0.72□□□□□ -2.52
NUP188P52593 RFX1YLR176C 2436 nt-0.72□□□□□ -2.52
NUP188P52593 SPO74YGL170C 1242 nt-0.72□□□□□ -2.53
NUP188P52593 ERV15YBR210W 429 nt-0.72□□□□□ -2.53
NUP188P52593 snR8snR8 190 nt-0.73□□□□□ -2.53
NUP188P52593 YJR011CYJR011C 786 nt-0.73□□□□□ -2.53
NUP188P52593 YBR224WYBR224W 516 nt-0.73□□□□□ -2.53
NUP188P52593 YCR038W-AYCR038W-A 126 nt-0.74□□□□□ -2.53
NUP188P52593 COG7YGL005C 840 nt-0.74□□□□□ -2.53
NUP188P52593 YBR221W-AYBR221W-A 105 nt-0.74□□□□□ -2.53
NUP188P52593 STO1YMR125W 2586 nt-0.74□□□□□ -2.53
NUP188P52593 REF2YDR195W 1602 nt-0.75□□□□□ -2.53
NUP188P52593 BFR1YOR198C 1413 nt-0.75□□□□□ -2.53
NUP188P52593 YLR101CYLR101C 396 nt-0.75□□□□□ -2.53
NUP188P52593 RRG1YDR065W 1098 nt-0.76□□□□□ -2.53
NUP188P52593 YEL073CYEL073C 324 nt-0.76□□□□□ -2.53
NUP188P52593 YHR212CYHR212C 336 nt-0.76□□□□□ -2.53
NUP188P52593 YAR060CYAR060C 336 nt-0.76□□□□□ -2.53
NUP188P52593 TAN1YGL232W 870 nt-0.77□□□□□ -2.53
NUP188P52593 OCA6YDR067C 675 nt-0.78□□□□□ -2.53
NUP188P52593 IZH4YOL101C 939 nt-0.78□□□□□ -2.53
NUP188P52593 PDE2YOR360C 1581 nt-0.79□□□□□ -2.54
NUP188P52593 SPO77YLR341W 1434 nt-0.79□□□□□ -2.54
NUP188P52593 SOV1YMR066W 2697 nt-0.79□□□□□ -2.54
NUP188P52593 YDL025W-AYDL025W-A 105 nt-0.79□□□□□ -2.54
NUP188P52593 COX5BYIL111W 456 nt-0.79□□□□□ -2.54
NUP188P52593 YOR186C-AYOR186C-A 210 nt-0.79□□□□□ -2.54
NUP188P52593 TIM13YGR181W 318 nt-0.8□□□□□ -2.54
NUP188P52593 YJL127W-AYJL127W-A 117 nt-0.8□□□□□ -2.54
NUP188P52593 YBR223W-AYBR223W-A 120 nt-0.81□□□□□ -2.54
NUP188P52593 YCR043CYCR043C 384 nt-0.81□□□□□ -2.54
NUP188P52593 RPC25YKL144C 639 nt-0.81□□□□□ -2.54
NUP188P52593 RPS10AYOR293W 318 nt-0.81□□□□□ -2.54
NUP188P52593 PTP2YOR208W 2253 nt-0.81□□□□□ -2.54
NUP188P52593 SCW11YGL028C 1629 nt-0.82□□□□□ -2.54
NUP188P52593 YCL020WYCL020W 1317 nt-0.82□□□□□ -2.54
NUP188P52593 ECM25YJL201W 1800 nt-0.83□□□□□ -2.54
NUP188P52593 HOT13YKL084W 351 nt-0.83□□□□□ -2.54
NUP188P52593 YBL068W-AYBL068W-A 237 nt-0.83□□□□□ -2.54
NUP188P52593 MIX23YBL107C 591 nt-0.83□□□□□ -2.54
NUP188P52593 YFL002W-BYFL002W-B 1317 nt-0.84□□□□□ -2.54
NUP188P52593 YGR161W-AYGR161W-A 1317 nt-0.84□□□□□ -2.54
NUP188P52593 TMA20YER007C-A 546 nt-0.84□□□□□ -2.54
NUP188P52593 YMR173W-AYMR173W-A 1185 nt-0.84□□□□□ -2.54
NUP188P52593 DDR48YMR173W 1293 nt-0.84□□□□□ -2.54
NUP188P52593 UPF3YGR072W 1164 nt-0.85□□□□□ -2.55
NUP188P52593 YJR141WYJR141W 1044 nt-0.85□□□□□ -2.55
NUP188P52593 YOR105WYOR105W 327 nt-0.85□□□□□ -2.55
NUP188P52593 YLR410W-AYLR410W-A 1317 nt-0.86□□□□□ -2.55
NUP188P52593 YGR114CYGR114C 390 nt-0.86□□□□□ -2.55
NUP188P52593 BET5YML077W 480 nt-0.86□□□□□ -2.55
NUP188P52593 YBL029WYBL029W 1131 nt-0.86□□□□□ -2.55
NUP188P52593 YAL064WYAL064W 285 nt-0.87□□□□□ -2.55
NUP188P52593 CGI121YML036W 546 nt-0.87□□□□□ -2.55
NUP188P52593 DPB11YJL090C 2295 nt-0.87□□□□□ -2.55
NUP188P52593 YCR022CYCR022C 345 nt-0.88□□□□□ -2.55
NUP188P52593 RPS7BYNL096C 573 nt-0.88□□□□□ -2.55
NUP188P52593 MUM2YBR057C 1101 nt-0.88□□□□□ -2.55
NUP188P52593 AME1YBR211C 975 nt-0.88□□□□□ -2.55
NUP188P52593 PMP1YCR024C-A 123 nt-0.88□□□□□ -2.55
NUP188P52593 PHO92YDR374C 921 nt-0.88□□□□□ -2.55
NUP188P52593 YNL150WYNL150W 408 nt-0.88□□□□□ -2.55
NUP188P52593 FIG1YBR040W 897 nt-0.88□□□□□ -2.55
NUP188P52593 NOP12YOL041C 1380 nt-0.9□□□□□ -2.55
NUP188P52593 TCA17YEL048C 459 nt-0.9□□□□□ -2.55
NUP188P52593 RRT16YNL105W 429 nt-0.9□□□□□ -2.55
NUP188P52593 YNL211CYNL211C 261 nt-0.9□□□□□ -2.55
NUP188P52593 YJL127C-BYJL127C-B 159 nt-0.91□□□□□ -2.55
NUP188P52593 MCM10YIL150C 1716 nt-0.91□□□□□ -2.56
NUP188P52593 RUF22RUF22 515 nt-0.91□□□□□ -2.56
NUP188P52593 ARP9YMR033W 1404 nt-0.92□□□□□ -2.56
NUP188P52593 YOP1YPR028W 543 nt-0.92□□□□□ -2.56
NUP188P52593 YBL100W-AYBL100W-A 1317 nt-0.92□□□□□ -2.56
NUP188P52593 VPS28YPL065W 729 nt-0.93□□□□□ -2.56
NUP188P52593 NOC3YLR002C 1992 nt-0.93□□□□□ -2.56
Retrieved 100 of 7,029 protein–RNA pairs in 28.7 ms