Protein–RNA interactions for Protein: P39980

SIT1, Siderophore iron transporter 1, yeastyeast

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SIT1P39980 INP2YMR163C 2118 nt2.6□□□□□ -1.99
SIT1P39980 SSS1YDR086C 243 nt2.6□□□□□ -1.99
SIT1P39980 ISD11YER048W-A 285 nt2.6□□□□□ -1.99
SIT1P39980 ORC2YBR060C 1863 nt2.6□□□□□ -1.99
SIT1P39980 VIK1YPL253C 1944 nt2.6□□□□□ -1.99
SIT1P39980 MUK1YPL070W 1839 nt2.59□□□□□ -1.99
SIT1P39980 PLC1YPL268W 2610 nt2.59□□□□□ -1.99
SIT1P39980 YLL032CYLL032C 2478 nt2.59□□□□□ -2
SIT1P39980 MSB2YGR014W 3921 nt2.58□□□□□ -2
SIT1P39980 YMR230W-AYMR230W-A 189 nt2.58□□□□□ -2
SIT1P39980 RPB10YOR210W 213 nt2.58□□□□□ -2
SIT1P39980 KRE33YNL132W 3171 nt2.58□□□□□ -2
SIT1P39980 EDS1YBR033W 2760 nt2.58□□□□□ -2
SIT1P39980 VTC3YPL019C 2508 nt2.58□□□□□ -2
SIT1P39980 BPT1YLL015W 4680 nt2.57□□□□□ -2
SIT1P39980 SMC6YLR383W 3345 nt2.57□□□□□ -2
SIT1P39980 MDM1YML104C 3384 nt2.57□□□□□ -2
SIT1P39980 SPT21YMR179W 2277 nt2.57□□□□□ -2
SIT1P39980 MDM20YOL076W 2391 nt2.57□□□□□ -2
SIT1P39980 CYR1YJL005W 6081 nt2.56□□□□□ -2
SIT1P39980 YDR286CYDR286C 345 nt2.56□□□□□ -2
SIT1P39980 YHR073W-AYHR073W-A 177 nt2.56□□□□□ -2
SIT1P39980 YLR120W-AYLR120W-A 102 nt2.56□□□□□ -2
SIT1P39980 YMR321CYMR321C 318 nt2.56□□□□□ -2
SIT1P39980 YOR015WYOR015W 360 nt2.56□□□□□ -2
SIT1P39980 YOR302WYOR302W 78 nt2.56□□□□□ -2
SIT1P39980 snR43snR43 209 nt2.56□□□□□ -2
SIT1P39980 ZRG8YER033C 3231 nt2.56□□□□□ -2
SIT1P39980 UBR1YGR184C 5853 nt2.56□□□□□ -2
SIT1P39980 YCR043CYCR043C 384 nt2.55□□□□□ -2
SIT1P39980 FLO5YHR211W 3228 nt2.55□□□□□ -2
SIT1P39980 INA22YIR024C 651 nt2.55□□□□□ -2
SIT1P39980 RFX1YLR176C 2436 nt2.55□□□□□ -2
SIT1P39980 TRS130YMR218C 3309 nt2.55□□□□□ -2
SIT1P39980 TCB2YNL087W 3537 nt2.55□□□□□ -2
SIT1P39980 YOR011W-AYOR011W-A 207 nt2.55□□□□□ -2
SIT1P39980 SLY1YDR189W 2001 nt2.54□□□□□ -2
SIT1P39980 snR72snR72 98 nt2.54□□□□□ -2
SIT1P39980 MTC3YGL226W 372 nt2.54□□□□□ -2
SIT1P39980 YJL182CYJL182C 318 nt2.54□□□□□ -2
SIT1P39980 YLR466C-BYLR466C-B 117 nt2.54□□□□□ -2
SIT1P39980 NUP100YKL068W 2880 nt2.54□□□□□ -2
SIT1P39980 SPF1YEL031W 3648 nt2.54□□□□□ -2
SIT1P39980 tF(GAA)QtF(GAA)Q 75 nt2.53□□□□□ -2
SIT1P39980 SIR3YLR442C 2937 nt2.53□□□□□ -2
SIT1P39980 PTP3YER075C 2787 nt2.53□□□□□ -2
SIT1P39980 PDE2YOR360C 1581 nt2.53□□□□□ -2.01
SIT1P39980 YDL185C-AYDL185C-A 228 nt2.52□□□□□ -2.01
SIT1P39980 YHL005CYHL005C 393 nt2.52□□□□□ -2.01
SIT1P39980 PAU8YAL068C 363 nt2.52□□□□□ -2.01
SIT1P39980 PAU18YLL064C 363 nt2.52□□□□□ -2.01
SIT1P39980 PAU6YNR076W 363 nt2.52□□□□□ -2.01
SIT1P39980 PAU20YOL161C 363 nt2.52□□□□□ -2.01
SIT1P39980 BUB1YGR188C 3066 nt2.52□□□□□ -2.01
SIT1P39980 ESL2YKR096W 3588 nt2.51□□□□□ -2.01
SIT1P39980 EMP24YGL200C 612 nt2.51□□□□□ -2.01
SIT1P39980 YGR151CYGR151C 336 nt2.51□□□□□ -2.01
SIT1P39980 YOR073W-AYOR073W-A 234 nt2.51□□□□□ -2.01
SIT1P39980 YCL046WYCL046W 324 nt2.51□□□□□ -2.01
SIT1P39980 LYS14YDR034C 2373 nt2.51□□□□□ -2.01
SIT1P39980 IRR1YIL026C 3453 nt2.51□□□□□ -2.01
SIT1P39980 GIP3YPL137C 3831 nt2.5□□□□□ -2.01
SIT1P39980 MNE1YOR350C 1992 nt2.5□□□□□ -2.01
SIT1P39980 YHR071C-AYHR071C-A 321 nt2.49□□□□□ -2.01
SIT1P39980 NOP14YDL148C 2433 nt2.49□□□□□ -2.01
SIT1P39980 RPA190YOR341W 4995 nt2.49□□□□□ -2.01
SIT1P39980 RAV1YJR033C 4074 nt2.47□□□□□ -2.01
SIT1P39980 TOF1YNL273W 3717 nt2.47□□□□□ -2.01
SIT1P39980 YRB1YDR002W 606 nt2.47□□□□□ -2.01
SIT1P39980 RPS17AYML024W 411 nt2.47□□□□□ -2.01
SIT1P39980 VPS54YDR027C 2670 nt2.47□□□□□ -2.01
SIT1P39980 AI5_ALPHAQ0070 1893 nt2.46□□□□□ -2.02
SIT1P39980 CLN3YAL040C 1743 nt2.46□□□□□ -2.02
SIT1P39980 POL3YDL102W 3294 nt2.46□□□□□ -2.02
SIT1P39980 TIM9YEL020W-A 264 nt2.46□□□□□ -2.02
SIT1P39980 YPR092WYPR092W 306 nt2.46□□□□□ -2.02
SIT1P39980 ELG1YOR144C 2376 nt2.46□□□□□ -2.02
SIT1P39980 CHC1YGL206C 4962 nt2.46□□□□□ -2.02
SIT1P39980 MET18YIL128W 3099 nt2.45□□□□□ -2.02
SIT1P39980 ARP8YOR141C 2646 nt2.45□□□□□ -2.02
SIT1P39980 MPT5YGL178W 2580 nt2.45□□□□□ -2.02
SIT1P39980 SUP56tL(CAA)A 82 nt2.45□□□□□ -2.02
SIT1P39980 SUP53tL(CAA)C 82 nt2.45□□□□□ -2.02
SIT1P39980 tL(CAA)DtL(CAA)D 82 nt2.45□□□□□ -2.02
SIT1P39980 tL(CAA)G1tL(CAA)G1 82 nt2.45□□□□□ -2.02
SIT1P39980 SUP54tL(CAA)G2 82 nt2.45□□□□□ -2.02
SIT1P39980 tL(CAA)G3tL(CAA)G3 82 nt2.45□□□□□ -2.02
SIT1P39980 tL(CAA)KtL(CAA)K 82 nt2.45□□□□□ -2.02
SIT1P39980 tL(CAA)LtL(CAA)L 82 nt2.45□□□□□ -2.02
SIT1P39980 tL(CAA)MtL(CAA)M 82 nt2.45□□□□□ -2.02
SIT1P39980 tL(CAA)NtL(CAA)N 82 nt2.45□□□□□ -2.02
SIT1P39980 NEW1YPL226W 3591 nt2.45□□□□□ -2.02
SIT1P39980 TFC8YPL007C 1767 nt2.44□□□□□ -2.02
SIT1P39980 YCR102W-AYCR102W-A 198 nt2.44□□□□□ -2.02
SIT1P39980 YDR003W-AYDR003W-A 123 nt2.44□□□□□ -2.02
SIT1P39980 YEL014CYEL014C 306 nt2.44□□□□□ -2.02
SIT1P39980 VPS55YJR044C 423 nt2.44□□□□□ -2.02
SIT1P39980 YOR343W-BYOR343W-B 5313 nt2.44□□□□□ -2.02
SIT1P39980 SVL3YPL032C 2478 nt2.44□□□□□ -2.02
SIT1P39980 DNF1YER166W 4716 nt2.43□□□□□ -2.02
Retrieved 100 of 7,029 protein–RNA pairs in 77.7 ms